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2024-02-27gnu: python-astropy: Update to 6.0.0.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-astropy): Update to 6.0.0. [arguments] <#:phases>: Adjust 'preparations phase to be compatible with the new code layout. In 'check phase, silent one more failing test. [propagated-inputs]: Add python-astropy-iers-data. [native-inputs]: Remove python-cython; add python-cython-3, python-matplotlib and python-pytest-mpl. Change-Id: Id48a7cf05c30c1a1f7799fdc162b910316743f7c
2024-02-27gnu: Add python-astropy-iers-data.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-astropy-iers-data): New variable. Change-Id: Idd2e099013a4c6a6a28fc3dc8aa656bb58b3d697
2024-02-27gnu: python-aioftp: Update to 0.22.3.Sharlatan Hellseher
* gnu/packages/python-web.scm (python-aioftp): Update to 0.22.3. [build-system]: Swap to pyproject-build-system, there is no setup.py in new release. [arguments] <#:phases>: Use standard 'check phase. Change-Id: I8e6a145da86e5ed56eb184d98d54bc8093a3bd1f
2024-02-27gnu: siril: Update to 1.2.1.Sharlatan Hellseher
* gnu/packages/astronomy.scm (siril): Update to 1.2.1. Change-Id: I52492a51ad5205914b9bfa930db22809b968e5a7
2024-02-27gnu: parfive: Simplify package.Sharlatan Hellseher
* gnu/packages/python-web.scm (parfive) [build-system]: Swap to pyproject-build-system. [arguments] <#:phases>: Use standard 'check phase. <#:test-flags>: Move disabled tests here and remove 'disable-test-requiring-network phase. Change-Id: I08b67b2aa7027ac37e0a3df4da7ebb01ea3c451e
2024-02-27gnu: parfive: Update to 2.0.2.Sharlatan Hellseher
* gnu/packages/python-web.scm (parfive): Update to 2.0.2. Change-Id: I3890cbae4d706c5f3391809fc6b4ce36140f059d
2024-02-27gnu: phd2: Update to 2.6.13.Sharlatan Hellseher
* gnu/packages/astronomy.scm (phd2): Update to 2.6.13. Change-Id: Iac8d1e00be3ea9137b10f2608c149fcbde539c7b
2024-02-27gnu: indi-2.0: Update to 2.0.6.Sharlatan Hellseher
* gnu/packages/astronomy.scm (indi-2.0): Update to 2.0.6. Change-Id: Id8e9243639beadc3a9bd854af92797643b5d62d8
2024-02-27gnu: giza: Update to 1.4.1.Sharlatan Hellseher
* gnu/packages/maths.scm (giza): Update to 1.4.1. Change-Id: I7e6087e22cc6dea4a680fa45db155e42a724b50d
2024-02-27gnu: calceph: Update to 3.5.5.Sharlatan Hellseher
* gnu/packages/astronomy.scm (calceph): Update to 3.5.5. Change-Id: Ie8963af1d30ad153be17e342c9f698a078279308
2024-02-27gnu: diffoscope: Update to 258.Vagrant Cascadian
* gnu/packages/diffoscope.scm (diffoscope): Update to 258.
2024-02-27gnu: linux-libre 4.19: Update to 4.19.307.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.307. (linux-libre-4.19-pristine-source): Update hash. Change-Id: Ib88b6bac125a919706202a975311201478251030 Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: linux-libre 5.4: Update to 5.4.269.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.269. (linux-libre-5.4-pristine-source): Update hash. Change-Id: I5d0ac105976a12b8233804a35080838099f3f7e4 Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: linux-libre 5.10: Update to 5.10.210.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.210. (linux-libre-5.10-pristine-source): Update hash. Change-Id: I707cd72140fe0f0879082668cd5aa8346df1aab3 Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: linux-libre 5.15: Update to 5.15.149.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.149. (linux-libre-5.15-pristine-source): Update hash. Change-Id: I7c129f78db381e7733d240d77de534f8b5b387ad Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: linux-libre 6.1: Update to 6.1.79.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.79. (linux-libre-6.1-pristine-source, deblob-scripts-6.1): Update hashes. Change-Id: I280553d8efd294ac044765629c920e593185e3c8 Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: linux-libre 6.6: Update to 6.6.18.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.18. (linux-libre-6.6-pristine-source): Update hash. Change-Id: I1167a7aeb1118f8aaf6c74306e82f8e33f73f0e8 Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: linux-libre 6.7: Update to 6.7.6.Wilko Meyer
* gnu/packages/linux.scm (linux-libre-6.7-version): Update to 6.7.6. (linux-libre-6.7-pristine-source): Update hash. Change-Id: Ic1511423b3894c5a80240bebe369c861de6384a3 Signed-off-by: Leo Famulari <leo@famulari.name>
2024-02-27gnu: gdb: Update to 14.1.Greg Hogan
* gnu/packages/gdb.scm (gdb-12): Rename to ... (gdb-14): ... and update to 14.1. (avr-gdb, gdb-minimal, gdb-multiarch): Inherit from GDB-14. Change-Id: I1396ba885fc97a8b0387a4b8e4c04ff018eba23f Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-27gnu: googlebenchmark: Update to 1.8.3.Greg Hogan
* gnu/packages/check.scm (googlebenchmark): Update to 1.8.3. Change-Id: I7fb761304e180f5b1cd5031a970909fba2dca1d7 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-27gnu: Add yambar-wayland.chris
* gnu/packages/wm.scm (yambar-wayland): New variable. Change-Id: I7b1d5d3626b915261b5b3f7fea3a3ace03adbf11 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-27gnu: pspp: Update to 2.0.0.Andy Tai
* gnu/packages/statistics.scm (pspp): Update to 2.0.0 [arguments](phases): Patch test case to make pass due to locale [native-inputs]: Switch from Python 2 to Python 3 Change-Id: I9feeab72789347033d2df8f23bda9ea27aaa7dd9 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-27gnu: petsc: Reduce closure size.Lars Bilke
Reduces closure size from 828 MiB to 463 MiB (44%) by removing references to build dependencies such as GCC. * gnu/packages/maths.scm (petsc)[arguments]: Add ‘clear-reference-to-compiler’ phase. In ‘clean-install’ phase, also remove “configure-hash”. Change-Id: I2e6900747b2118546f0a39ceb109b3f2f90e6949 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-27gnu: libgit2-1.4: Update to 1.4.6.Efraim Flashner
* gnu/packages/version-control.scm (libgit2-1.4): Update to 1.4.6. Change-Id: Ieb470e93d6be9a2e45585b747efb695ef9f33161
2024-02-27gnu: l2md: Fix build on 32-bit systems.Efraim Flashner
* gnu/packages/mail.scm (l2md)[source]: Add snippet to gate macOS build fix to only apply when building for Apple devices. Change-Id: Id303a89ec78ce160cfb6ebed232a841c8283e812
2024-02-27gnu: libgit2-1.7: Update to 1.7.2.Efraim Flashner
* gnu/packages/version-control.scm (libgit2-1.7): Update to 1.7.2. Change-Id: I60ad4aa2a5b29b027755cf8add848bd4a8b71282
2024-02-26gnu: libgit2: Introduce ‘libgit2-1.5’ variable.Ludovic Courtès
* gnu/packages/version-control.scm (libgit2): Rename to… (libgit2-1.5): … this. (libgit2): Alias for ‘libgit2-1.5’. Change-Id: I7f6aff23df3b968d914736fe723dcdd435176ce2
2024-02-26gnu: guile-git: Depend on libgit2 1.7.Ludovic Courtès
* gnu/packages/guile.scm (guile-git)[inputs]: Replace LIBGIT2-1.3 with LIBGIT2-1.7. Change-Id: Ia386f977b0888b7bd9b26443ac6150428fda2155
2024-02-26gnu: guile-git: Update to 0.6.0.Ludovic Courtès
* gnu/packages/guile.scm (guile-git): Update to 0.6.0. [source]: Remove ‘patches’ field. * gnu/packages/patches/guile-git-adjust-for-libgit2-1.2.0.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it. Change-Id: I49300461389bc24a9802fbda5e374a330ffc3715
2024-02-26gnu: libgit2: Set ‘GITTEST_FLAKY_STAT’ when running tests on GNU/Hurd.Ludovic Courtès
* gnu/packages/version-control.scm (libgit2)[arguments]: Install ‘pre-check’ phase when ‘target-hurd?’ returns true. Change-Id: I664d4aa2a0ad76a10a47ae7bc3c5912756972b46
2024-02-26gnu: Remove python-nltk-3.4.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-nltk-3.4): Remove variable. Change-Id: I865380c0428d459147c0980065719c32bf67075a
2024-02-26gnu: python-lunr: Update to 0.7.0.post1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-lunr): Update to 0.7.0.post1. [build-system]: Use pyproject-build-system. [arguments]: Disable tests that need nodejs. [native-inputs]: Remove python-mock; add python-coverage, python-hatch-fancy-pypi-readme, python-hatchling, python-pytest-timeout, and python-tox. [propagated-inputs]: Remove python-nltk-3.4; add python-importlib-metadata and python-typing-extensions. Change-Id: Ide9b0d98878dd8972d883c1c0e391a9a4b660eba
2024-02-26gnu: Add pass-coffinChristian Miller via Guix-patches via
* gnu/packages/password-utils.scm (pass-coffin): New variable. Reviewed-by: Steve George <steve@futurile.net> Change-Id: I2fdf6c755b9b75780c5a3c0304e5b961a15640a4 Signed-off-by: Andreas Enge <andreas@enge.fr>
2024-02-26gnu: Add paritwine.Andreas Enge
* gnu/packages/algebra.scm (paritwine): New variable. Change-Id: If2a55dd4a42d4d27a67249bd11592635ade20351
2024-02-26gnu: cm: Update to 0.4.3.Andreas Enge
* gnu/packages/algebra.scm (cm): Update to 0.4.3. [inputs]: Add flint. Change-Id: Icb1a01a2abcdf6a0685503a0d032a21b42d464d6
2024-02-26gnu: r-dmrseq: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.22.1. Change-Id: I7c05a4927a3984917c6de7bc5daa3f28794894d7
2024-02-26gnu: r-beachmat: Update to 2.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.18.1. Change-Id: I854c4c21cad66e3fb2bfe63fe01c31c3aff7d109
2024-02-26gnu: r-hdf5array: Update to 1.30.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.30.1. Change-Id: I48d733554b9c74e10d29b123008ba6d20fa85641
2024-02-26gnu: r-variancepartition: Update to 1.32.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.5. Change-Id: I9195cbe28f85001bcd91fa3d57f0017db5b352b7
2024-02-26gnu: r-a4: Update to 1.50.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-a4): Update to 1.50.1. Change-Id: If07b255590ad99146a81729af073aac67cd535d4
2024-02-26gnu: r-chippeakanno: Update to 3.36.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.36.1. Change-Id: I133f7ca3032f5f5722a8d5d9cbf1bf1da42ff4a9
2024-02-26gnu: r-seqarray: Update to 1.42.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-seqarray): Update to 1.42.2. Change-Id: I6b4915c8dbdf14054125cac33bfddde4605fbc58
2024-02-26gnu: r-edger: Update to 4.0.16.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.16. Change-Id: I542bbe7f290a5282f76eea7b88f605f6fa714624
2024-02-26gnu: r-anf: Update to 1.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anf): Update to 1.24.1. Change-Id: I5843d257e4312101fb1b0dc9bbb49bd088bb3b91
2024-02-26gnu: r-anvil: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.14.2. Change-Id: I91fa1253e5f174d9d1d445edd873ceb23a783787
2024-02-26gnu: r-mclust: Update to 6.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mclust): Update to 6.1. Change-Id: I52a5bd83b26e0d1d35e494e6dab1e6dec594fdfc
2024-02-26gnu: r-runit: Update to 0.4.33.Ricardo Wurmus
* gnu/packages/statistics.scm (r-runit): Update to 0.4.33. Change-Id: I0690643ff91f9ec7e41d1dba68d23eae1d981d8b
2024-02-26gnu: r-gdtools: Update to 0.3.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.6. Change-Id: I87b02d5665f60c80d28085895b2693cda94f95bc
2024-02-26gnu: r-ggdendro: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggdendro): Update to 0.2.0. Change-Id: I2a046a754ff08c83367e39e8692722611ebcb500
2024-02-26gnu: r-ggplot2: Update to 3.5.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.5.0. Change-Id: I65435f9ddb69a9c62c79edd4eadd8c3d601251c6
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