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2024-03-27gnu: go-github-com-alecthomas-units: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/golang.scm (go-github-com-alecthomas-units): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. * gnu/packages/xdisorg.scm: Remove (gnu packages golang). Change-Id: I9a4d7da82c9ca1b3c4e0d07d97d8fcde30590e33
2024-03-27gnu: go-github-com-alecthomas-template: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/golang.scm (go-github-com-alecthomas-template): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Iffdd88439819c526cd6dd940192bf48995bf76bc
2024-03-27gnu: go-github-com-alecthomas-kingpin: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/golang.scm (go-github-com-alecthomas-kingpin): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Ib7609a82c96683809f81479f4eb13f43d85d4a2f
2024-03-27gnu: go-github-com-kballard-go-shellquote: Move to golang-xyz.Sharlatan Hellseher
* gnu/packages/syncthing.scm (go-github-com-kballard-go-shellquote): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. * gnu/packages/xdisorg.scm: Remove (gnu packages syncthing). Add (gnu packages golang-xyz). Change-Id: I3ab4cbc55d8ca0ad8b7fec0130bdb935039f2841
2024-03-27gnu: Add r-ggmosaic.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggmosaic): New variable. Change-Id: Ia399265c01a57074b0cfc29dde45e1900ccc26de
2024-03-27gnu: Add r-productplots.Ricardo Wurmus
* gnu/packages/cran.scm (r-productplots): New variable. Change-Id: I4b8105773e11791e57d6461e8c2b6c65ffc6c6a2
2024-03-27gnu: python-mysqlclient: Update to 2.2.4.Marco Rimoldi
* gnu/packages/databases.scm (python-mysqlclient): Update to 2.2.4. [arguments]<#:phases>: Remove 'fix-test phase. [native-inputs]: Add pkg-config. Change-Id: I57a0b84eb0d56f9cea619b226090cc1ccd84812b Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: python-mysqlclient: Enable selected tests.Marco Rimoldi
* gnu/packages/databases.scm (python-mysqlclient) [build-system]: Change to pyproject-build-system. [arguments] <#:phases>: Add 'fix-test phase. <#:test-flags>: Specify tests to run. [native-inputs]: Add python-pytest. [inputs]: Replace mariadb:dev with mariadb-connector-c. [home-page]: Update. Change-Id: I5ae0873155f9a7cc90a318762b77864665fadc01 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: libtommath: Update to 1.3.0.Efraim Flashner
* gnu/packages/multiprecision.scm (libtommath): Update to 1.3.0. Change-Id: If0b4758abb634f4e7564d90e8a5534ebdf6579a6
2024-03-27home: services: bash: Reorder aliases.Jason Darby
Reported in <https://issues.guix.gnu.org/67652>. * home/services/shells.scm (add-bash-configuration): Reorder aliases. Change-Id: I288856bb6befe378ca60ef78578acc069cb18532 Reported-by: Atte Torri <atte.torri@universite-paris-saclay.fr> Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: Add tree-sitter-matlab.Nicolas Graves
* gnu/packages/tree-sitter.scm (tree-sitter-matlab): New variable. Change-Id: I5a72d20e18ed370852b9a6d3037d94675aad8c4b Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: Add tree-sitter-ungrammar.Paul A. Patience
* gnu/packages/tree-sitter.scm (tree-sitter-ungrammar): New variable. Change-Id: I162e1ffe692aaf0b81080e4df239bba10da477ed Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: Add tree-sitter-ron.Paul A. Patience
* gnu/packages/tree-sitter.scm (tree-sitter-ron): New variable. Change-Id: I26abfa4a298b23a14bcea852c2974e694daddecd Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: Add tree-sitter-hcl.Paul A. Patience
* gnu/packages/tree-sitter.scm (tree-sitter-hcl): New variable. Change-Id: I2522cf5cc30b313c16636821deed2752ea65b43e Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27gnu: Add tree-sitter-kdl.Paul A. Patience
* gnu/packages/tree-sitter.scm (tree-sitter-kdl): New variable. Change-Id: I40a9d9629e29d1682999d9787d4092775be23c19 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27linux-modules: Ignore nonexistent module files on boot.Hilton Chain
This is a follow-up to 8f8ec56052766aa5105d672b77ad9eaca5c1ab3c, which only covers building initrd, while the booting code still tries to load nonexistent files for builtin modules. * gnu/build/linux-modules.scm (load-linux-modules-from-directory): Ignore nonexistent module files. Change-Id: I09ef207e82397e915e671c8464b92bcf90f03dcf
2024-03-27gnu: Add python-icecream.nafkhamdc
* gnu/packages/python-xyz.scm (python-icecream): New variable. Change-Id: I866d0ce591a1b81fdd7e0ee706cb8e9791e70c49 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-27gnu: Add python-pytest-relaxed.nafkhamdc
* gnu/packages/check.scm (python-pytest-relaxed): New variable. Change-Id: I9c506fe6a6586c87d72775a0567fd3c45ba03568 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-27gnu: r-bionero: Update to 1.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.10.2. Change-Id: I419476f683156fa612b35680c5de3f8044851439
2024-03-27gnu: r-flowworkspace: Update to 4.14.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.3. Change-Id: I2a717e99d7b71df0c3774ad235e0fe87f5b2aa19
2024-03-27gnu: r-rprotobuflib: Update to 2.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.14.1. Change-Id: I10d2e5f7d7e55039085c51592b2046a340810a0a
2024-03-27gnu: r-flowcore: Update to 2.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.14.2. Change-Id: I61158d6b9243c4386149364ef0d36a0d1bd5e4b8
2024-03-27gnu: r-trackviewer: Update to 1.38.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.2. Change-Id: I1b26ba59abbba23d8215a16fdf9bbb7e49e54260
2024-03-27gnu: r-dittoseq: Update to 1.14.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.14.3. Change-Id: I85f76e70f0b275749d622dad28346c0912e09b57
2024-03-27gnu: r-diffcyt: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.22.1. Change-Id: Id1d88a4a660908c949107ffaf3ec33e5d69bff11
2024-03-27gnu: r-hdcytodata: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdcytodata): Update to 1.22.1. Change-Id: I7c159709261c7862a171aac14962b4b18cf1459f
2024-03-27gnu: r-rstudioapi: Update to 0.16.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.16.0. Change-Id: I587b1c0a7ba302ba158cc8c40d1bf3477a106d8a
2024-03-27gnu: r-dbplyr: Update to 2.5.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.5.0. Change-Id: I14e5c4a551dc8311d6ee563763a4cd0d0d136c55
2024-03-27gnu: r-lattice: Update to 0.22-6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-lattice): Update to 0.22-6. Change-Id: I7f273c9264eaddae45bb7d44ee2dbff99546cd91
2024-03-27gnu: r-maxlik: Update to 1.5-2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-maxlik): Update to 1.5-2.1. Change-Id: Iaa44b650388003bbefe20b8d54874475a9d86104
2024-03-27gnu: r-mlr3pipelines: Update to 0.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.5.1. Change-Id: Ie59fd68968bf930d60b7740b6d3e07e2d786e5df
2024-03-27gnu: r-tidymodels: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidymodels): Update to 1.2.0. Change-Id: Ic806e59987525dbed0f5fa174863a88c236d9c4d
2024-03-27gnu: r-infer: Update to 1.0.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-infer): Update to 1.0.7. [propagated-inputs]: Add r-lifecycle. Change-Id: I749a723ea02dac13f9d441622dde03b04c5b8bbd
2024-03-27gnu: r-parsnip: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-parsnip): Update to 1.2.1. Change-Id: I16f45c41a20f472aac34f6879c487d81f6fd1203
2024-03-27gnu: r-tune: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tune): Update to 1.2.0. [propagated-inputs]: Add r-dofuture and r-future. Change-Id: I21cf291720b57744ddced96bbbb70baeebf2f109
2024-03-27gnu: r-rsample: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rsample): Update to 1.2.1. Change-Id: If01f092f1fe8c97aa19c47a3341c43d1e9a2d40a
2024-03-27gnu: r-yardstick: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-yardstick): Update to 1.3.1. Change-Id: I7b3dd4259a33464f79d894b3c8105b62c8899324
2024-03-27gnu: r-spatstat: Update to 3.0-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat): Update to 3.0-8. Change-Id: I885f9707f1c442e2b1f1667792b33e665ecfa809
2024-03-27gnu: r-spatstat-linnet: Update to 3.1-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.1-5. Change-Id: Ic27f633860cf3cabf11f37201c1d5d48b7f9b70e
2024-03-27gnu: r-spatstat-model: Update to 3.2-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-model): Update to 3.2-11. Change-Id: I130c3ab3297e85029f5ed258bc422e785e7ec3f6
2024-03-27gnu: r-spatstat-explore: Update to 3.2-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.2-7. Change-Id: I546958e57050caa3d88680e367cd97923c0db412
2024-03-27gnu: r-brms: Update to 2.21.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-brms): Update to 2.21.0. [propagated-inputs]: Remove r-shinystan; add r-future-apply. Change-Id: Ib3b6a5735b5c63048fadf3c76a83cd8de124e9d7
2024-03-27gnu: r-gamlss: Update to 5.4-22.Ricardo Wurmus
* gnu/packages/cran.scm (r-gamlss): Update to 5.4-22. Change-Id: Id1cfdc34085517e9e5efb8f32a337e606308f230
2024-03-27gnu: r-lintr: Update to 3.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-lintr): Update to 3.1.2. Change-Id: I2d1cb387700eead4f4b03d62c92b7d585c729789
2024-03-27gnu: r-sf: Update to 1.0-16.Ricardo Wurmus
* gnu/packages/cran.scm (r-sf): Update to 1.0-16. Change-Id: I829bac513bbacfd627dc4b0e7ab61218f143336c
2024-03-27gnu: r-repr: Update to 1.1.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-repr): Update to 1.1.7. Change-Id: I9fd9c543b402b026558e8fb9aa1eaf19f4a95b4b
2024-03-27gnu: r-future: Update to 1.33.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-future): Update to 1.33.2. Change-Id: Ic3a1b4386014e86bf2f1e928953aa40bff01fe33
2024-03-27gnu: r-ggeffects: Update to 1.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggeffects): Update to 1.5.1. Change-Id: Icfe585cafb33da76346bda59e6458c0312d805b5
2024-03-27gnu: r-performance: Update to 0.11.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-performance): Update to 0.11.0. Change-Id: Ifa3bfdca69accddaad64d3827906be55a93908c2
2024-03-27gnu: r-glmmtmb: Update to 1.1.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.9. Change-Id: I30a4985a2b7cc5613e8b45d33c345aa8bb2cb3b3
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