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2023-07-09gnu: avfs: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/file-systems.scm (avfs)[home-page]: Use HTTPS.
2023-07-09gnu: 4ti2: Update home page.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (4ti2)[home-page]: Update.
2023-07-09gnu: aumix: Use Web Archive URLs.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (aumix)[source, home-page]: Use copies archived by the Wayback Machine.
2023-07-09gnu: armadillo: Update to 12.4.1.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (armadillo): Update to 12.4.1.
2023-07-09gnu: aspell-dict-nb: Correct to 0.50-2.Tobias Geerinckx-Rice
* gnu/packages/aspell.scm (aspell-dict-nb): Fix version number. No hash change.
2023-07-09gnu: Use aquamaniac.de/ as home page for its projects.Tobias Geerinckx-Rice
* gnu/packages/gnucash.scm (gwenhywfar, aqbanking)[home-page]: Use top-level directory as done upstream.
2023-07-09gnu: ghostscript: Fix CVE-2023-36664.Tobias Geerinckx-Rice
* gnu/packages/ghostscript.scm (ghostscript/fixed): New variable. (ghostscript)[replacement]: Assign it to new field. * gnu/packages/patches/ghostscript-CVE-2023-36664.patch, gnu/packages/patches/ghostscript-CVE-2023-36664-fixup.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2023-07-09gnu: antiword: Use Web Archive URLs.Tobias Geerinckx-Rice
* gnu/packages/textutils.scm (antiword)[source, home-page]: Use copies archived by the Wayback Machine.
2023-07-09gnu: anthy: Mark up description.Tobias Geerinckx-Rice
* gnu/packages/anthy.scm (anthy)[description]: Use @file{}.
2023-07-09gnu: anthy: Add source mirror URL.Tobias Geerinckx-Rice
* gnu/packages/anthy.scm (anthy)[source]: Add a Japanese Gentoo distfiles mirror.
2023-07-09gnu: altermime: Cross-compile.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (altermime)[arguments]: Use CC-FOR-TARGET. Add a new 'do-not-strip phase.
2023-07-09gnu: altermime: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (altermime)[arguments]: Rewrite as G-expressions. Don't explicitly return #t from phases.
2023-07-09gnu: altermime: Download over HTTPS.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (altermime)[source]: Use HTTPS.
2023-07-09gnu: alpine: Download over HTTPS.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (alpine)[source]: Use HTTPS.
2023-07-09gnu: aiger: Use HTTPS source & home page.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (aiger)[source, home-page]: Use HTTPS.
2023-07-09gnu: borg: Update to 1.2.4.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borg): Update to 1.2.4.
2023-07-14gnu: rumpkernel: Don't error for non x86 systems.Christopher Baines
As the lack of handling other systems, say aarch64-linux here seemed to cause problems with guix pull on these systems. This should work around #64609. * gnu/packages/hurd.scm (rumpkernel)[arguments]: Don't error for any system.
2023-07-14Revert "gnu: mig: Update to 1.8+git20230520."Christopher Baines
As noted in the comment, I think using git-fetch caused problems computing derivaations for i586-linux (Guix would just use more and more memory). This reverts commit 999a6ac0cfd9339e138007ed9e4e544a55e92e3e.
2023-07-14gnu: zig-0.9: Fix building on riscv64-linux.Efraim Flashner
* gnu/packages/zig.scm (zig-0.9)[source]: Add patch. [arguments]: Skip tests when building for riscv64-linux. When building for riscv64-linux add a phase to adjust the tests. * gnu/packages/patches/zig-0.9-riscv-support.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2023-07-13gnu: linux-libre: Update to 6.3.13.Leo Famulari
* gnu/packages/linux.scm (linux-libre-6.3-version): Update to 6.3.13. (linux-libre-6.3-pristine-source): Update hash.
2023-07-13gnu: Add python-plotnine.Ricardo Wurmus
* gnu/packages/python-science.scm (python-plotnine): New variable.
2023-07-13gnu: python-mizani: Fix embedded version string.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-mizani)[native-inputs]: Add python-setuptools-scm to correct embedded version form 0.0.0 to 0.9.2.
2023-07-13gnu: gnumach: Disable builtin networking.Janneke Nieuwenhuizen
See also https://logs.guix.gnu.org/hurd/2023-05-25.log#163610 * gnu/packages/hurd.scm (gnumach)[arguments]: Add --disable-net-group, --disable-pcmcia-group, and --disable-wireless-group. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13services: static-networking: Support netdde for the Hurd.Janneke Nieuwenhuizen
As suggested by Sergey Bugaev on bug-hurd https://lists.gnu.org/archive/html/bug-hurd/2023-05//msg00455.html * gnu/services/base.scm (static-networking->hurd-pfinet-options): Use /DEV/ethX. Use long options for settrans. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13system: hurd: Add netdde to %base-packages/hurd.Janneke Nieuwenhuizen
* gnu/system/hurd.scm (%base-packages/hurd): Add netdde. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13hurd-boot: Cater for netdde.Janneke Nieuwenhuizen
* gnu/build/hurd-boot.scm (set-hurd-device-translators): Setup translators for netdde, eth{0,1}. Create /servers/socket/{inet,inet6} symlinks. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: netdde: Resurrect and update to 2.6.32.65-2-e67c284ac1.Janneke Nieuwenhuizen
* gnu/packages/patches/netdde-build-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/hurd.scm (netdde)[source]: Update to e67c284ac113d939b10b4578334f27dab29d5b08 and use it. [inputs]: Add zlib:static. [arguments]: Remove #true from build phases. In 'build' phase, remove obsolete CFLAGS, and also build static version. In 'install' phase, install them in <out>/hurd. There is no check target, so set #:tests? to #false. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: gnumach: Support "noide" argument.Janneke Nieuwenhuizen
* gnu/packages/patches/gnumach-support-noide.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/hurd.scm (gnumach-headers): Use it. * doc/guix.texi (Bootloader Configuration): Document it. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13bootloader: grub: Use rumpdisk-style root when booting with "noide".Janneke Nieuwenhuizen
* gnu/bootloader/grub.scm (make-grub-configuration): When "noide" is in arguments, use device name "wd0" rather than "hd0". Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13system: hurd: Boot with pci.arbiter and rumpdisk.Janneke Nieuwenhuizen
* gnu/system.scm (hurd-multiboot-modules): Add commands for pci.arbiter and rumpdisk. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13services: childhurd: Bump default qemu memory to 2048MB.Janneke Nieuwenhuizen
When booting with pci-arbiter and rumpdisk and using 1024MB of memory for qemu, booting hangs, or seems to hang, at the end of the rumpdisk boot messages. At least 1200MB is required, currently. * gnu/services/virtualization.scm (<hurd-vm-configuration>)[memory-size]: Bump to 2048. * gnu/system/examples/bare-hurd.tmpl: Suggest using 2048 here too. Update example `guix system image' and "qemu" command lines too. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13hurd-boot: Setup pci-arbiter and rumpdisk translators.Janneke Nieuwenhuizen
* gnu/build/hurd-boot.scm (make-hurd-device-nodes): Create "servers/bus/pci. (set-hurd-device-translators): Create transators for pci-arbiter, rumpdisk, and /dev/wd0..3s1..4. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: hurd: Add rumpkernel.Janneke Nieuwenhuizen
* gnu/packages/patches/hurd-fix-rumpdisk-build.patch, gnu/packages/patches/hurd-rumpdisk-no-hd.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/hurd.scm (hurd): Use them. (hurd)[inputs]: Replace util-linux with util-linux:static, add parted, rumpkernel. [arguments]: Rename `prepare-dde' phase to 'prepare-addons'. Add "rumpdisk" directory. Add --enable-static-progs=... option to #:configure-flags, and remove --without-parted. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: parted: Support building for the Hurd.Janneke Nieuwenhuizen
* gnu/packages/disk.scm (parted)[inputs]: Remove lvm2, add hurd-minimal when building for the Hurd. [arguments]: Add configure-flag '--disable-device-mapper' when building for the Hurd. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: hurd-minimal: Include libshouldbeinlibc and libstore.Janneke Nieuwenhuizen
* gnu/packages/hurd.scm (hurd-minimal)[inputs]: Add gnumach-headers. [arguments]: Rewrite to include libshouldbeinlibc and libstore. * gnu/packages/cross-base.scm (cross-kernel-headers*): Update xhurd-minimal accordingly: Add xgnumach-headers, add them to cpath, use gexps for modify-phases, add delete-shared-target phase. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: Add rumpkernel.Janneke Nieuwenhuizen
This uses the Debian Salsa rumpkernel package git as upstream as that is where delopment happens. Once things have stabalized upstream may change to the NetBSD git from where Debian takes their snapshots. * gnu/packages/hurd.scm (rumpkernel): New variable. (hurd-headers)[native-inputs]: Use cross-mig directly. (gnumach)[native-inputs]: Likewise. (hurd)[native-inputs]: Likewise. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: hurd: Update libpciaccess to 0.17.Janneke Nieuwenhuizen
As suggested by youpi on IRC https://logs.guix.gnu.org/hurd/2023-05-17.log#132259 libpciaccess-0.16 is too old for the Hurd and would need Hurd-specific patches while libpciaccess-0.17 works out of the box. * gnu/packages/hurd.scm (hurd)[inputs]: Use libpciaccess-0.17. (netdde)[inputs]: Likewise. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: Add libpciaccess-0.17.Janneke Nieuwenhuizen
* gnu/packages/xorg.scm (libpciaccess-0.17): New variable. Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
2023-07-13gnu: hurd: Update to v0.9.git20230216.Josselin Poiret
* gnu/packages/hurd.scm (hurd-headers): Update to v0.9.git20230216.
2023-07-13gnu: mig: Update to 1.8+git20230520.Josselin Poiret
* gnu/packages/hurd.scm (mig)[source]: Update to 1.8+git20230520. * gnu/packages/patches/gnumach-add-missing-const_mach_port_name_array_t-type.patch: Drop patch. * gnu/local.mk (dist_patch_DATA): Unregister it.
2023-07-13gnu: gnumach: Update to 1.8+git20221224.Josselin Poiret
* gnu/packages/hurd.scm (gnumach-headers): Update to 1.8+git20221224.
2023-07-13gnu: Add libc-for-target and glibc/hurd.Josselin Poiret
* gnu/packages/patches/glibc-2.37-hurd-clock_t_centiseconds.patch * gnu/packages/patches/glibc-2.37-hurd-local-clock_gettime_MONOTONIC.patch * gnu/packages/patches/glibc-2.37-versioned-locpath.patch: New patches. * gnu/local.mk (dist_patch_DATA): Register them. * gnu/packages/base.scm (glibc/hurd, libc-for-target): New variables. (glibc/hurd-headers): Use glibc/hurd. * gnu/packages/commencement.scm (glibc-final-with-bootstrap-bash)[outputs, source, arguments] (glibc-final)[source]: Use libc-for-target instead of glibc. * gnu/packages/cross-base.scm (cross-libc/deprecated, cross-libc*): Use libc-for-target. This part fixes https://issues.guix.gnu.org/63641#25 * gnu/packages/commencement.scm (%final-inputs): Change to memoized lambda taking "system". * gnu/packages/commencement.scm (canonical-package): Likewise, and update user, passing (%current-system). (make-gcc-toolchain): Update user, passing (%current-system). * gnu/packages/base.scm (%final-inputs): Likewise. * guix/scripts/refresh.scm (options->update-specs): Likewise. * guix/build-system/gnu.scm (standard-packages): Add optional "system" parameter. (lower): Update caller. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Co-authored-by: Janneke Nieuwenhuizen <janneke@gnu.org>
2023-07-13gnu: hurd: Update supported systems.Josselin Poiret
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal, hurd-core-headers, gnumach): Update supported systems to %hurd-systems.
2023-07-13gnu: gnumach-headers: Cross-build without relying on x86.Josselin Poiret
* gnu/packages/hurd.scm (gnumach-headers): Remove configure flags where we say the builder is running x86. * gnu/packages/cross-base.scm (cross-gnumach-headers): Work around limitation of build system, by manually changing the target host_cpu without relying on --host, because we don't have a working cross-compiler yet.
2023-07-13gnu: glibc/hurd-headers: Properly cross-build.Josselin Poiret
* gnu/packages/base.scm (glibc/hurd-headers): Rely on cross-mig, and remove hardcoded configure flag `--host=i586-pc-gnu`. * gnu/packages/cross-base.scm (cross-kernel-headers*): Add `--host` and `--build` configure flags.
2023-07-13gnu: arpack-ng: Update to 3.9.0.Ludovic Courtès
* gnu/packages/maths.scm (arpack-ng): Update to 3.9.0. [source]: Add 'patches'. [build-system]: Switch to CMAKE-BUILD-SYSTEM. [native-inputs]: Remove AUTOCONF, AUTOMAKE, and LIBTOOL. (arpack-ng-openmpi)[inputs]: Use 'modify-inputs'. [arguments]: Use gexps. * gnu/packages/patches/arpack-ng-propagate-rng-state.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2023-07-13gnu: sssd: Update to 2.9.1.Timotej Lazar
* gnu/packages/sssd.scm (sssd): Update to 2.9.1. [native-inputs]: Add bc. * gnu/packages/patches/sssd-system-directories.patch: Adjust for new version. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-07-13gnu: clang-runtime-15: Fix address sanitizer supportTobias Kortkamp
$ guix shell clang-toolchain@15 -- clang -o test -fsanitize=address test.c ld: cannot find /gnu/store/i429h17s15g48ir9vl1bzp3cv39l5pib-clang-runtime-15.0.7/lib/linux/libclang_rt.asan_static-x86_64.a: No such file or directory ld: cannot find /gnu/store/i429h17s15g48ir9vl1bzp3cv39l5pib-clang-runtime-15.0.7/lib/linux/libclang_rt.asan-x86_64.a: No such file or directory clang-15: error: linker command failed with exit code 1 (use -v to see invocation) * gnu/packages/llvm.scm (clang-runtime-15): Fix address sanitizer support by bringing back the static libraries. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-07-13gnu: libleak: Update to 0.3.6.fanquake
* gnu/packages/debug.scm (libleak): Update to 0.3.6.
2023-07-12gnu: Add r-numbat.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-numbat): New variable.
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