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2022-05-12gnu: Add python-nbdime.Maxim Cournoyer
* gnu/packages/jupyter.scm (python-nbdime): New variable.
2022-05-12gnu: python-notebook: Update to 6.4.10.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-notebook): Update to 6.4.10. [phases]{check}: Remove add-installed-pythonpath. [native-inputs]: python-nest-asyncio.
2022-05-12gnu: python-send2trash: Update to 1.8.0 and update home page.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-send2trash): Update to 1.8.0. [source]: Update Git URL. [phases]{pre-check}: Set HOME to /tmp directly. {check}: Override phase. [native-inputs]: Add python-pytest. [properties]: Delete field. (python2-send2trash): Delete variable. [home-page]: Update URL.
2022-05-12gnu: python-nbval: Fix build.Maxim Cournoyer
* gnu/packages/python-check.scm (python-nbval) [phases]: Delete trailing #t. {check}: Skip newly failing 'test_conf_ignore_stderr' test. Remove INPUTS and OUTPUTS arguments. Add TESTS? and honor it.
2022-05-12gnu: Add python-jupyter-server-mathjax.Maxim Cournoyer
* gnu/packages/jupyter.scm (python-jupyter-server-mathjax): New variable.
2022-05-12gnu: python-nbconvert: Update to 6.5.0.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-nbconvert): Update to 6.5.0. [arguments]: Use gexps. [phases]{fix-paths-and-tests}: Rename to... {fix-paths}: ... this. Find inputs via search-input-file. Patch inskcape file name. Disable tests in... {check}: ... this phase instead. Do not set HOME. Execute installed test suite. Run tests in parallel. Disable and not test_execute_widgets_from_nbconvert and test_execute_multiple_notebooks tests. [inputs]: Add inkscape. [native-inputs]: Delete python-pytest-cov and python-pytest-dependency. Use new style. [propagated-inputs]: Add python-beautifulsoup4. Reduce the texlive packages part of the generated updmap.cfg input, moving them to regular propagated inputs. Add texlive-unicode-math and texlive-lm-math.
2022-05-12gnu: Add texlive-lm-math.Maxim Cournoyer
* gnu/packages/tex.scm (texlive-lm-math): New variable.
2022-05-12gnu: Add texlive-unicode-math.Maxim Cournoyer
* gnu/packages/tex.scm (texlive-unicode-math): New variable.
2022-05-12gnu: python-bleach: Update to 5.0.0.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-bleach): Update to 5.0.0. [propagated-inputs]: Remove python-packaging and python-six. Add python-tinycss2.
2022-05-12gnu: python-nbclient: Update to 0.6.0.Maxim Cournoyer
* gnu/packages/jupyter.scm (python-nbclient): Update to 0.6.0. [tests?]: Update comment. [propagated-inputs]: Remove python-async-generator. [native-inputs]: Delete field. [description]: Fix spacing.
2022-05-12gnu: python-anyio: Replace python-pytest-trio with python-trio.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-anyio) [phases]{check}: Remove extraneous add-installed-pythonpath call. Expound comment about IPv6 issues. [native-inputs]: Use regular python-pytest. Replace python-pytest-trio by python-trio.
2022-05-12gnu: python-ipyparallel: Update to 8.2.1.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-ipyparallel-bootstrap): Update to 8.2.1. [propagated-inputs]: Add python-entrypoints, python-psutil and python-tqdm. Update python-tornado to version 6. (python-ipyparallel)[phases]{check}: Override phase. [native-inputs]: Remove python-mock and python-nose. Add python-pytest-asyncio and python-pytest-tornado.
2022-05-12gnu: Add python-pytest-tornado.Maxim Cournoyer
* gnu/packages/python-check.scm (python-pytest-tornado): New variable.
2022-05-12gnu: python-ipykernel: Update to 6.13.0.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-ipykernel): Update to 6.13.0. [origin]: Fix indentation. [phases]: Use gexps. {check}: Invoke pytest via tini {set-python-file-name}: Adjust to use search-input-file. [propagated-inputs]: Add python-debugpy, python-matplotlib-inline and python-psutil. [native-inputs]{python-nose}: Delete. {python-ipyrallel-bootstrap}: New native input. {python-pytest}: Replace with... {python-pytest-bootstrap}: ... this. {python-pytest-timeout, tini}: New native inputs.
2022-05-12gnu: python-jupyter-client: Update to 7.2.2.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-jupyter-client-bootstrap): Make the base package definition, moving most fields. Update to 7.2.2. [propagated-inputs]: Add python-entrypoints and python-nest-asyncio. (python-jupyter-client): Inherit from python-jupyter-client-bootstrap, adjusting accordingly. [native-inputs]: Add python-pytest-asyncio.
2022-05-12gnu: python-jupyter-core: Update to 4.10.0.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-jupyter-core): Update to 4.10.0. [phases]: Delete trailing #t. {check}: Remove extraneous add-installed-pythonpath. Skip the test_argv0, test_path_priority and test_not_on_path tests. [propagated-inputs, native-inputs]: Fix indentation.
2022-05-12gnu: python-nest-asyncio: Update to 1.5.5.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-nest-asyncio): Update to 1.5.5.
2022-05-12gnu: Add python-ipyparallel-bootstrap.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-ipyparallel): Morph into... (python-ipyparallel-bootstrap): ... this, moving native inputs to a new definition of... (python-ipyparallel): ... this.
2022-05-12gnu: python-pytest-xdist-next: Update to 2.5.0.Maxim Cournoyer
* gnu/packages/check.scm (python-pytest-xdist-next): Update to 2.5.0. [propagated-inputs]: replace python-pytest-forked with python-pytest-forked-next.
2022-05-12gnu: Add python-pytest-forked-next.Maxim Cournoyer
* gnu/packages/check.scm (python-pytest-forked-next): New variable.
2022-05-12gnu: python-greenlet: Update to 1.1.2.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-greenlet): Update to 1.1.2.
2022-05-12gnu: Add python-debugpy.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-debugpy): New variable. * gnu/packages/patches/python-debugpy-unbundle-pydevd.patch: New file. * gnu/local.mk: Register it.
2022-05-12gnu: Add python-pydevd.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-pydevd): New variable.
2022-05-12gnu: python-trio: Update to 0.20.0.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-trio): Update to 0.20.0. [phases]{patch-sleep}: New phase. [change-home]: Delete trailing #t. {check}: Run tests in parallel. Disable the test_cancel_scope_exit_doesnt_create_cyclic_garbage, test_ipython_exc_handler, test_for_leaking_fds and test_static_tool_sees_all_symbols tests. [native-inputs]: Add python-pytest-xdist.
2022-05-12gnu: pylint: Run tests in parallel.Maxim Cournoyer
* gnu/packages/check.scm (python-pylint) [phases]{check}: Add the '-n' option to use xdist with pytest. [native-inputs]: Add python-pytest-xdist.
2022-05-12gnu: python-black: Update to 22.3.0.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-black): Update to 22.3.0. [phases]{relax-version-requirements}: Delete phase. {use-absolute-file-names}: Streamline phase. {disable-broken-tests, remove-entrypoint}: Delete phases.
2022-05-12gnu: Add python-untangle.Maxim Cournoyer
* gnu/packages/xml.scm (python-untangle): New variable.
2022-05-12gnu: python-flask: Update to 2.1.1.Maxim Cournoyer
* gnu/packages/python-web.scm (python-flask): Update to 2.1.1. [propagated-inputs]: Add python-asgiref and python-importlib-metadata. [home-page]: Update.
2022-05-12gnu: python-click: Update to 8.1.2 and honor TESTS?.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-click): Update to 8.1.2. [phases]{fix-paths}: Remove obsolete phase. {check}: Invoke pytest directly and honor TESTS?. (python2-click): Delete variable.
2022-05-12gnu: Add font-gfs-ambrosia.Maxim Cournoyer
* gnu/packages/fonts.scm (font-gfs-ambrosia): New variable.
2022-05-12gnu: Add texlive-bidi.Maxim Cournoyer
* gnu/packages/tex.scm (texlive-bidi): New variable.
2022-05-12gnu: Add font-sil-ezra.Maxim Cournoyer
* gnu/packages/fonts.scm (font-sil-ezra): New variable.
2022-05-12gnu: Add font-amiri.Maxim Cournoyer
* gnu/packages/fonts.scm (font-amiri): New variable.
2022-05-12gnu: Add python-sfdlib.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-sfdlib): New variable.
2022-05-12gnu: Add python-ufo2ft.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-ufo2ft): New variable.
2022-05-12gnu: Add python-compreffor.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-compreffor): New variable.
2022-05-12gnu: Add python-ufolib2.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-ufolib2): New variable.
2022-05-12gnu: Add python-skia-pathops.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-skia-pathops): New variable.
2022-05-12gnu: Add skia.Maxim Cournoyer
* gnu/packages/graphics.scm (skia): New variable.
2022-05-12gnu: Add python-cffsubr.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-cffsubr): New variable.
2022-05-12gnu: Add python-afdko.Maxim Cournoyer
* gnu/packages/fontutils.scm (python-afdko): New variable.
2022-05-12gnu: Add python-fonttools-next.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-fonttools-next): New variable.
2022-05-12gnu: Add java-antlr4-runtime-cpp.Maxim Cournoyer
* gnu/packages/java.scm (java-antlr4-runtime-cpp): New variable.
2022-05-12gnu: python-scipy: Update to 1.8.0 and enable parallel build.Maxim Cournoyer
* gnu/packages/python-science.scm (python-scipy): Update to 1.8.0. [modules]: New argument. [phases]{disable-broken-tests}: Delete phase. {configure-openblas}: Streamline configuration template. {parallelize-build}: New phase. {install-doc}: Move before 'check phase. Remove now extraneous 'add-installed-pythonpath' call. Remove the SPHINXBUILD and PYVER Make variables, as well as conf.py patching. Provide SPHINXOPTS to build doc in parallel. Simply recursively copy the 'html' output directory to install the doc. {check}: Remove extraneous INPUTS and OUTPUTS arguments. Start tests with the 'runtests.py' launcher, which accepts a '-j' argument to run the tests in parallel. [native-inputs]: Sort inputs. Add python-pytest-xdist and python-threadpoolctl. [home-page]: Update.
2022-05-12gnu: python-scipy: Move input fields below arguments field.Maxim Cournoyer
* gnu/packages/python-science.scm (python-scipy): Move inputs fields below the arguments field. [phases]: Use gexp. {configure-openblas}: Use this-package-input. {check}: Remove extraneous 'add-installed-pythonpath' call. {install-doc}: Adjust accordingly.
2022-05-12gnu: python-jupyter-packaging: Update to 0.12.0, run test suite.Maxim Cournoyer
* gnu/packages/jupyter.scm (python-jupyter-packaging): Update to 0.12.0. [arguments]: New field.
2022-05-12gnu: Add python-scikit-build.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-scikit-build): New variable.
2022-05-12gnu: python-pytest-cov: Update to 3.0.0.Maxim Cournoyer
This restores the package compatibility with python-pytest-xdist. * gnu/packages/check.scm (python-pytest-cov): Update to 3.0.0. (python2-pytest-cov): Delete package.
2022-05-12gnu: python-pytest-shutil: Adjust to use python-path.Maxim Cournoyer
* gnu/packages/python-check.scm (python-pytest-shutil) [phases]{use-path-instead-of-path.py}: New phase. [propagated-inputs]: Replace python-path.py with python-path.
2022-05-12gnu: python-pathpy: Deprecate by python-path.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-pathpy): Mark as deprecated by python-path.
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