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2021-04-12services: Add ipfs-service-type...* gnu/services/networking.scm (ipfs-service-type) (%ipfs-home-mapping, %ipfs-environment) (%ipfs-accounts, %ipfs-home): New variables. (ipfs-configuration, ipfs-configuration?) (ipfs-configuration-package, ipfs-configuration-gateway) (ipfs-configuration-api, ipfs-shepherd-service) (ipfs-binary, %ipfs-activation): New procedures. * doc/guix.texi (Networking Services): Document it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2021-04-12gnu: racket: Don't inject store paths into Racket files....Apparently, during grafting, Guix can somehow mangle compiled Racket CS files (.zo) such that Racket will refuse to load them. (Maybe it has something to do with compression?) So, we stop patching Racket sources with absolute paths to store files (i.e. for foreign libraries to dlopen). Instead, we put them in a data file that doesn't get compiled or, in one case, embed it in C. Fixes https://issues.guix.gnu.org/47064 * gnu/packages/patches/racket-sh-via-rktio.patch: New file. Adds a special case at the C level, controlled by a preprocessor macro, to handle attempts to execute "/bin/sh". * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/scheme.scm (racket)[source](patches): Apply it. (racket)[arguments](#:configure-flags): Add the CPP flag to enable it. (racket)[arguments](#:modules): Use srfi-1. (racket)[arguments](#:phases): Remove 'patch-/bin/sh and 'pre-configure. Change 'pre-configure-minimal to just change directory. Add 'patch-config.rktd-lib-search-dirs after 'build and before 'install to configure Racket's "lib-search-dirs". (racket, racket-minimal)[inputs]: Add bash-minimal as an explicit input. (racket-minimal)[source]: Adjust to inherit patches from racket. (racket-minimal)[arguments]: Inherit from racket: changes no longer needed. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Philip McGrath
2021-04-12gnu: Add r-txdb-dmelanogaster-ucsc-dm6-ensgene....* gnu/packages/bioconductor.scm (r-txdb-dmelanogaster-ucsc-dm6-ensgene): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> hli
2021-04-12services: Support DELETE in MODIFY-SERVICES macro....* gnu/services.scm (%modify-service): Add clause for DELETE syntax. (modify-services): Use FILTER-MAP; adjust docstring. * doc/guix.texi (System Services): Mention alternative syntax. (X Window): Use MODIFY-SERVICES syntax. Ricardo Wurmus
2021-04-12gnu: Add cl-bodge-queue....* gnu/packages/lisp-xyz.scm (sbcl-bodge-queue, cl-bodge-queue, ecl-bodge-queue): New variables. Co-authored-by: Guillaume Le Vaillant <glv@posteo.net> Adam Kandur
2021-04-12gnu: hydrogen: Update to 1.0.2....* gnu/packages/music.scm (hydrogen): Update to 1.0.2. Nicolas Goaziou
2021-04-12gnu: Add openvdb....* gnu/packages/graphics.scm (openvdb): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Ekaitz Zarraga
2021-04-12gnu: Add texlive-newtx....* gnu/packages/tex.scm: New variable. Paul Garlick
2021-04-12gnu: java-eclipse-jetty-util: Update to 9.4.39 [security fixes]....Fixes CVE-2021-28165 - jetty server high CPU when client send data length > 17408, CVE-2021-28164 - Normalize ambiguous URIs and CVE-2021-28163 - Exclude webapps directory from deployment scan. * gnu/packages/java.scm (java-eclipse-jetty-util): Update to 9.4.39. (java-eclipse-jetty-util-ajax): New variable. (java-eclipse-jetty-util, java-eclipse-jetty-io, java-eclipse-jetty-http) (java-eclipse-jetty-jmx, java-eclipse-jetty-server) (java-eclipse-jetty-security, java-eclipse-jetty-servlet) (java-eclipse-jetty-xml, java-eclipse-jetty-webapp): Disable tests. [native-inputs]: Remove test dependencies. Julien Lepiller
2021-04-12gnu: hangups: Run test suite....* gnu/packages/messaging.scm (hangups)[arguments]: Use custom 'check phase. Efraim Flashner
2021-04-12gnu: hangups: Loosen version restrictions further....* gnu/packages/messaging.scm (hangups)[arguments]: Adjust custom 'relax-dependencies phase to allow more dependency versions. Efraim Flashner
2021-04-12gnu: python-mechanicalsoup: Update to 1.0.0....* gnu/packages/python-web.scm (python-mechanicalsoup): Update to 1.0.0. [arguments]: Enable tests. [native-inputs]: Add python-pytest-flake8, python-pytest-httpbin, python-pytest-cov, python-pytest-mock, python-pytest-runner, python-requests-mock. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Ekaitz Zarraga
2021-04-12tests: docker: Increase VM building memory size to 1024MiB....This fixes the following error when running the "docker-system" test: In ice-9/ftw.scm: 553:30 1 (_ #<directory stream db6660>) In unknown file: 0 (readdir #<directory stream db6660>) ERROR: In procedure readdir: In procedure readdir: Cannot allocate memory * gnu/tests/docker.scm (%test-docker-system): Bump image building VM memory size to 1024 MiB. Mathieu Othacehe
2021-04-12system: vm: Add a memory-size argument to system-docker-image....* gnu/system/vm.scm (system-docker-image): Add a memory-size argument and pass it to expression->derivation-in-linux-vm. Mathieu Othacehe
2021-04-12gnu: renpy: Update to 7.4.4....* gnu/packages/game-development.scm (python2-renpy): Update to 7.4.4. (python2-pygame-sdl2)[renpy-version]: Likewise. Leo Prikler
2021-04-12gnu: nginx: Enable stream module....* gnu/packages/web.scm (nginx)[arguments]: Add --with-stream option in the 'configure phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> methuselah-0
2021-04-12gnu: Add prips....gnu/packages/admin.scm (prips): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> methuselah-0
2021-04-12gnu: blis: Add deprecated aliases....Add deprecated aliases for packages removed in the parent commit. * gnu/packages/maths.scm (blis-sandybridge, blis-haswell, blis-knl): New variables. Ludovic Courtès
2021-04-12gnu: blis: Update to 0.8.1....* gnu/packages/maths.scm (make-blis): Remove internal function. Inline into ... (bliss): ... this variable. Update to 0.8.1. [native-inputs]: Add "python" and "perl". [arguments]: Adjust 'configure' phase to take advantage of new support for "configuration families" with runtime hardware detection. Select configuration automatically based on target systems, and allow "--blis-config=" in #:configure-flags to override the default. When building for x86_64, include all supported microarchetecture specializations. Add "--enable-verbose-make" configure flag for better build logs. Stop ignoring other flags from #:configure-flags. Remove explicit #:substitutable? argument: the package is now always substitutable. Add (srfi srfi-1) to #:modules. (blis/x86_64): Remove internal macro. (blis-sandybridge): Remove package: included in 'blis'. (blis-haswell): Remove package: included in 'blis'. (blis-knl): Remove package: included in 'blis'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Philip McGrath
2021-04-12ci: Fix system-tests subset....* gnu/ci.scm (system-test-jobs): Make sure that "all-system-tests" is also covered by the "current-guix-package" parameter. Mathieu Othacehe
2021-04-12gnu: monero-gui: Update to 0.17.2.0....* gnu/packages/finance.scm (monero-gui): Update to 0.17.2.0. Guillaume Le Vaillant
2021-04-12gnu: monero: Update to 0.17.2.0....* gnu/packages/finance.scm (monero): Update to 0.17.2.0. Guillaume Le Vaillant
2021-04-12gnu: newlib-nano: Fix nano lib and header paths....* gnu/packages/embedded.scm (newlib-nano-arm-none-eabi)[arguments]: Hard link library files from *.a to *_nano.a. Hard link newlib.h to a common location. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Morgan Smith
2021-04-12gnu: electron-cash: Add missing input....Fixes <https://bugs.gnu.org/47654>. * gnu/packages/finance.scm (electron-cash)[inputs]: Add python-pathvalidate. Guillaume Le Vaillant
2021-04-12gnu: Add python-pathvalidate....* gnu/packages/python-xyz.scm (python-pathvalidate): New variable. Guillaume Le Vaillant
2021-04-12gnu: Add python-allpairspy....* gnu/packages/python-check.scm (python-allpairspy): New variable. Guillaume Le Vaillant
2021-04-11gnu: Syncthing: Update to 1.15.1 [fixes CVE-2021-21404]....* gnu/packages/syncthing.scm (syncthing): Update to 1.15.1. [source]: Use bundled dependencies. [inputs]: Remove field. [arguments]: Adjust the custom 'build' and 'install' phases for 1.15.1. Signed-off-by: Leo Famulari <leo@famulari.name> Leo Famulari
2021-04-12gnu: python-cython: Update to 0.29.22....* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.22. Tobias Geerinckx-Rice
2021-04-12gnu: python-fastimport: Update to 0.9.9....* gnu/packages/python-xyz.scm (python-fastimport): Update to 0.9.9. Tobias Geerinckx-Rice
2021-04-12gnu: minetest: Update to 5.4.1....* gnu/packages/games.scm (minetest, minetest-data): Update to 5.4.1. Tobias Geerinckx-Rice
2021-04-12gnu: ghq: Update to 1.1.7....* gnu/packages/version-control.scm (ghq): Update to 1.1.7. Tobias Geerinckx-Rice
2021-04-11gnu: lagrange: Update to 1.3.2....* gnu/packages/web-browsers.scm (lagrange): Update to 1.3.2. Tobias Geerinckx-Rice
2021-04-11gnu: irssi: Update to 1.2.3....* gnu/packages/irc.scm (irssi): Update to 1.2.3. Tobias Geerinckx-Rice
2021-04-11gnu: edgar: Update to 1.34....* gnu/packages/games.scm (edgar): Update to 1.34. Tobias Geerinckx-Rice
2021-04-11gnu: libime: Update to 1.0.6....* gnu/packages/fcitx5.scm (libime): Update to 1.0.6. Tobias Geerinckx-Rice
2021-04-11gnu: acpica: Update to 20210331....* gnu/packages/admin.scm (acpica): Update to 20210331. Tobias Geerinckx-Rice
2021-04-11gnu: python-skyfield: Update to 1.38....* gnu/packages/astronomy.scm (python-skyfield): Update to 1.38. Tobias Geerinckx-Rice
2021-04-11gnu: librsync: Update to 2.3.2....* gnu/packages/rsync.scm (librsync): Update to 2.3.2. Tobias Geerinckx-Rice
2021-04-11gnu: Add python-pysctp....* gnu/packages/networking.scm(python-pysctp): New variable. Hartmut Goebel
2021-04-11gnu: lksctp-tools: Fix build of include file....* gnu/packages/patches/lksctp-tools-1.0.18-fix-header-file-name.patch: New file. * gnu/local.mk[patches]: Add it. * gnu/packages/networking.scm(/lksctp-tools)[source]: Use this patch. Hartmut Goebel
2021-04-11gnu: gpodder: Update to 3.10.18....* gnu/packages/gpodder.scm (gpodder): Update to 3.10.18. [native-inputs]: Add python-pytest, python-pytest-cov, python-pytest-httpserver and which. [inputs]: Add python-requests. Pierre Langlois
2021-04-11gnu: Add python-pytest-httpserver....* gnu/packages/check.scm (python-pytest-httpserver): New variable. Pierre Langlois
2021-04-11gnu: scintilla: Update to 5.0.1....* gnu/packages/text-editors.scm (scintilla): Update to 5.0.1. Nicolas Goaziou
2021-04-11gnu: emacs-ivy-posframe: Update to 0.6.0....* gnu/packages/emacs-xyz.scm (emacs-ivy-posframe): Update to 0.6.0. Nicolas Goaziou
2021-04-11gnu: emacs-posframe: Update to 1.0.0....* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.0.0. Nicolas Goaziou
2021-04-11gnu: Add abook....* gnu/packages/mail.scm (abook): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Alexandru-Sergiu Marton
2021-04-11gnu: Add python-plumbum....* gnu/packages/python-xyz.scm (python-plumbum): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> LibreMiami
2021-04-11gnu: Add lagrange....* gnu/packages/web-browsers.scm (lagrange): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Alexander Krotov
2021-04-11gnu: Add emacs-ghq....* gnu/packages/emacs-xyz.scm (emacs-ghq): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Joseph LaFreniere
2021-04-11gnu: Add emacs-elfeed-protocol....* gnu/packages/emacs-xyz.scm (emacs-elfeed-protocol): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> nixo