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* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20190708.
[inputs]: Add new dependency, ghc-concurrent-output.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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git-annex relies on configuring Git's pre-commit and post-receive hooks.
Avoid patching the shebang that git-annex embeds when generating these hooks
so that the hooks don't fail if garbage collection claims the bash that was
current when the annex repository was initialized.
* gnu/packages/haskell-apps.scm (git-annex):[arguments]: Patch hook shebangs
only temporarily for tests.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.17.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* gnu/packages/ruby.scm (ruby-pg): Update to 1.1.4.
[inputs]: Change from POSTGRESQL-9.6 to POSTGRESQL.
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* gnu/packages/freedesktop.scm (exempi)[home-page]: Update to current.
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* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.15.
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* gnu/packages/databases.scm (postgresql-11): Update to 11.5.
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* gnu/packages/freedesktop.scm (exempi): Update to 2.5.1.
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* gnu/packages/photo.scm (libraw): Update to 0.19.4.
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* gnu/packages/cran.scm (r-modelr): Update to 0.1.5.
[propagated-inputs]: Remove r-lazyeval; add r-rlang.
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* gnu/packages/statistics.scm (r-quantreg): Update to 5.51.
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* gnu/packages/statistics.scm (r-knitr): Update to 1.24.
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* gnu/packages/statistics.scm (r-markdown): Update to 1.1.
[propagated-inputs]: Add r-xfun.
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* gnu/packages/cran.scm (r-ggsignif): Update to 0.6.0.
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* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.2.
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* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.1.
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* gnu/packages/games.scm (tome4)[arguments]: Add <#:parallel-build?>.
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This reverts commit 194e45f90addf5f9bd3e7e2de1dd50b3071f053b.
This commit does not have a good commit message, and it breaks master
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This reverts commit 173e046950e153477a6aaa0f4860d8f080df6843.
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* gnu/packages/bioinformatics.scm (freebayes): New variable.
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* gnu/packages/bioinformatics.scm (vcflib): New variable.
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* gnu/packages/bioinformatics.scm (fastahack): New variable.
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* gnu/packages/bioinformatics.scm (fsom): New variable.
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* gnu/packages/bioinformatics.scm (multichoose): New variable.
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* gnu/packages/bioinformatics.scm (smithwaterman): New variable.
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* gnu/packages/bioinformatics.scm (tabixpp): New variable.
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* gnu/packages/gnome.scm (network-manager-openconnect): New variable.
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* gnu/packages/haskell.scm (ghc-trifecta)[arguments]: Disable tests.
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* gnu/packages/haskell.scm (ghc-yaml)[arguments]: Disable tests.
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* gnu/packages/haskell.scm (ghc-libmpd-haskell)[arguments]: Disable
tests.
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The package has no reverse dependencies and is deprecated upstream.
* gnu/packages/haskell.scm (ghc-packedstring): Remove variable.
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The package doesn't build, has no reverse dependencies, and is
deprecated upstream.
* gnu/packages/haskell.scm (ghc-haddock-test): Remove variable.
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The package doesn't build, has no reverse dependencies, and is deprecated
upstream.
* gnu/packages/haskell.scm (ghc-regex-tdfa-rc): Remove variable.
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* gnu/packages/haskell-web.scm (ghc-snap-server): New variable.
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* gnu/packages/haskell-web.scm (ghc-snap-core): New variable.
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* gnu/packages/haskell-web.scm (ghc-http-streams): New variable.
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* gnu/packages/haskell-web.scm (ghc-http-common): New variable.
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* gnu/packages/haskell-crypto.scm (ghc-openssl-streams): New variable.
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* gnu/packages/haskell-crypto.scm (ghc-hsopenssl): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-io-streams-haproxy): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-io-streams): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-zlib-bindings): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-threads): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-readable): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-concurrent-extra): New variable.
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* gnu/packages/haskell-xyz.scm (ghc-language-glsl): New variable.
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* gnu/package/haskell-xyz.scm: New file.
* gnu/local.mk: Add it.
* gnu/packages/haskell-xyz.scm (ghc-prettyclass): New variable.
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This reverts commits
cbff89d126bf5985cfa4884f543c0908c437ff41,
5a499d0f7d5b98443ed0b2c41f2651f66a84ab5e, and
4e3ebbfb1649063bcc0f350523868c667e6699dd.
* gnu/packages/haskell.scm (ghc-ansi-terminal): Downgrade to 0.8.0.4.
(ghc-ansi-terminal-0.8): Delete variable.
(ghc-ansi-wl-pprint, ghc-concurrent-output)[inputs]: Replace
'ghc-ansi-terminal-0.8' with 'ghc-ansi-terminal'.
* gnu/packages/haskell-check.scm (ghc-hedgehog)[inputs]: Likewise.
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This is the Stackage LTS version, which is compatible with
ansi-terminal 0.8.
* gnu/packages/haskell.scm (ghc-validation): Downgrade to 1.
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This is the Stackage LTS version, which is compatible with
ansi-terminal 0.8.
* gnu/packages/haskell.scm (ghc-concurrent-output): Downgrade to 1.10.9
and use ghc-ansi-terminal-0.8.
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