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2020-10-31gnu: r-recipes: Update to 0.1.14.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 0.1.14.
2020-10-31gnu: r-broom: Update to 0.7.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 0.7.2.
2020-10-31gnu: r-squarem: Update to 2020.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-squarem): Update to 2020.5.
2020-10-31gnu: r-sp: Update to 1.4-4.Ricardo Wurmus
* gnu/packages/cran.scm (r-sp): Update to 1.4-4.
2020-10-31gnu: r-ff: Update to 4.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-ff): Update to 4.0.4.
2020-10-31gnu: r-getoptlong: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-getoptlong): Update to 1.0.4.
2020-10-31gnu: r-ps: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ps): Update to 1.4.0.
2020-10-31gnu: r-partykit: Update to 1.2-10.Ricardo Wurmus
* gnu/packages/cran.scm (r-partykit): Update to 1.2-10.
2020-10-31gnu: r-servr: Update to 0.20.Ricardo Wurmus
* gnu/packages/cran.scm (r-servr): Update to 0.20.
2020-10-31gnu: r-callr: Update to 3.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-callr): Update to 3.5.1.
2020-10-31gnu: r-ecp: Update to 3.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ecp): Update to 3.1.3.
2020-10-31gnu: r-clipr: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-clipr): Update to 0.7.1. [native-inputs]: Add r-knitr.
2020-10-31gnu: r-v8: Update to 3.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-v8): Update to 3.3.1.
2020-10-31gnu: Add r-rbibutils.Ricardo Wurmus
* gnu/packages/cran.scm (r-rbibutils): New variable.
2020-10-30gnu: python-pyux: Fix grammar.Vagrant Cascadian
* gnu/packages/python-check (python-pyux)[description]: Remove gratuitous use of "allows to".
2020-10-30gnu: python-pure-protobuf: Fix grammar.Vagrant Cascadian
* gnu/packages/protobuf (python-pure-protobuf)[description]: Remove gratuitous use of "allows to".
2020-10-30gnu: go-github-com-olekukonko-tablewriter: Fix grammar.Vagrant Cascadian
* gnu/packages/golang (go-github-com-olekukonko-tablewriter)[description]: Remove gratuitous use of "allows to" and fix pluralization.
2020-10-30gnu: emacs-org-generate: Fix grammar.Vagrant Cascadian
* gnu/packages/emacs-xyz (emacs-org-generate)[description]: Remove gratiutous use of "allows to".
2020-10-30gnu: python-django-url-filter: Fix grammar.Vagrant Cascadian
* gnu/packages/django (python-django-url-filter)[description]: Remove gratiutous use of "allows to".
2020-10-30gnu: r-vim: Fix grammar.Vagrant Cascadian
* gnu/packages/cran (r-vim)[description]: Remove gratuitous use of "allows to".
2020-10-30gnu: r-adamethods: Fix grammar.Vagrant Cascadian
* gnu/packages/cran (r-adamethods)[description]: Remove gratuitous use of "allow to".
2020-10-30gnu: resample: Fix grammar.Vagrant Cascadian
* gnu/packages/audio (resample)[description]: Fix gramar of "allows designing".
2020-10-30gnu: po4a: Update to 0.61.Julien Lepiller
* gnu/packages/gettext.scm (po4a): Update to 0.61.
2020-10-30system: Fix dependency for grub.cfg generation.Miguel Ángel Arruga Vivas
* gnu/bootloader/grub.scm (eye-candy)[font-file]: Use the bootloader package provided with the configuration.
2020-10-30system: Fix grub keymap with store in btrfs subvolume.Miguel Ángel Arruga Vivas
* gnu/bootloader/grub.scm (grub-configuration-file) [keyboard-layout-config]: Use normalize-file.
2020-10-30gnu: Add r-perfmeas.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-perfmeas): New variable.
2020-10-30gnu: Add python-pydub.Tanguy Le Carrour
* gnu/packages/python-xyz.scm (python-pydub): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-10-30gnu: java-fasterxml-jackson-core: Add synopsis and description.Julien Lepiller
* gnu/packages/java.scm (java-fasterxml-jackson-core): Add synopsis and description.
2020-10-30gnu: linux-libre 4.4: Update to 4.4.241.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.241. (linux-libre-4.4-pristine-source): Update hash.
2020-10-30gnu: linux-libre 4.9: Update to 4.9.241.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.241. (linux-libre-4.9-pristine-source): Update hash.
2020-10-30gnu: linux-libre 4.14: Update to 4.14.203.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.203. (linux-libre-4.14-pristine-source): Update hash.
2020-10-30gnu: linux-libre 4.19: Update to 4.19.154.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.154. (linux-libre-4.19-pristine-source): Update hash.
2020-10-30gnu: linux-libre 5.4: Update to 5.4.73.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.73. (linux-libre-5.4-pristine-source): Update hash.
2020-10-30gnu: linux-libre: Update to 5.9.2.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.9-version): Update to 5.9.2. (deblob-scripts-5.9, linux-libre-5.9-pristine-source): Update hashes. * gnu/packages/aux-files/linux-libre/5.9-arm.conf, gnu/packages/aux-files/linux-libre/5.9-arm64.conf, gnu/packages/aux-files/linux-libre/5.9-i686.conf, gnu/packages/aux-files/linux-libre/5.9-x86_64.conf: Update kernel configurations for 5.9.2.
2020-10-30gnu: dune-configurator: Add synopsis and description.Julien Lepiller
* gnu/packages/ocaml.scm (dune-configurator): Add synopsis and description.
2020-10-30gnu: ccls: Update to 0.20201025.Brett Gilio
* gnu/packages/cpp.scm (ccls): Update to 0.20201025.
2020-10-30guix: pack: Fix offset calculation for store directory mount point.Eric Bavier
Fixes wrapping of non-package things, where the target store directory may differ in length from the original. * guix/scripts/pack.scm (wrapped-package)<build-wrapper>: Define WRAPPER_PROGRAM macro with wrapper's file name. * gnu/packages/aux-files/run-in-namespace.c (main): Offset index by len of that file name.
2020-10-30gnu: Add lcdf-typetools.Julien Lepiller
* gnu/packages/fontutils.scm (lcdf-typetools): New variable.
2020-10-30services: guix-publish: Add 'cache-bypass-threshold' field.Ludovic Courtès
This is a followup to ecaa102a58ad3ab0b42e04a3d10d7c761c05ec98. * gnu/services/base.scm (<guix-publish-configuration>)[cache-bypass-threshold]: New field. (guix-publish-shepherd-service): Honor it.
2020-10-30gnu: guix: Update to 1c6d985.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to 1c6d985.
2020-10-30gnu: php: Update to 7.4.12 [security fixes].Tobias Geerinckx-Rice
* gnu/packages/php.scm (php): Update to 7.4.12. [arguments]: Disable two more failing tests.
2020-10-30gnu: cloud-utils: Update to 0.32.Christopher Baines
* gnu/packages/admin.scm (cloud-utils): Update to 0.32.
2020-10-30installer: Use UUIDs in the 'swap-devices' field.Ludovic Courtès
Note: This change requires an updated 'guix' package that contains Linux-swap support in (gnu build file-systems). * gnu/installer/parted.scm (user-partitions->configuration): Use UUIDs in the 'swap-devices' field. * gnu/installer/newt/final.scm (run-final-page)[wait-for-clients]: New procedure. Use it. * gnu/installer/tests.scm (choose-partitioning): Wait for 'starting-final-step' message and move configuration file dialog handling to... (conclude-installation): ... here. Send over PORT the reply corresponding to 'starting-final-step'. * gnu/tests/install.scm (gui-test-program): When ENCRYPTED? is false, invoke 'swaplabel' in the marionette. (installation-target-os-for-gui-tests): When ENCRYPTED? is false, except a fixed UUID.
2020-10-30services: swap: Allow for UUIDs and file system labels.Ludovic Courtès
* gnu/services/base.scm (swap-service-type)[device-lookup, device-name]: New variables. Add 'modules' field to 'shepherd-service'. In 'start' and 'stop', use 'device-lookup' to resolve UUIDs and labels. * doc/guix.texi (operating-system Reference): Adjust accordingly.
2020-10-30file-systems: Allow swap space lookup by UUID/label.Ludovic Courtès
* gnu/build/file-systems.scm (%linux-swap-magic, %page-size): New variables. (linux-swap-superblock?, read-linux-swap-superblock) (linux-swap-superblock-uuid, linux-swap-superblock-volume-name): New procedures. (%partition-label-readers, %partition-uuid-readers): Add them.
2020-10-30gnu: r-calculus: Fix typo in home-page.zimoun
* gnu/packages/cran.scm (r-calculus)[home-page]: Fix typo. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-10-30gnu: tome4: Update to 1.7.0.Oleg Pykhalov
* gnu/packages/games.scm (tome4): Update to 1.7.0.
2020-10-29gnu: emacs-tramp: Update to 2.4.4.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.4.4.3.
2020-10-29gnu: dropbear: Update to 2020.81.Tobias Geerinckx-Rice
* gnu/packages/ssh.scm (dropbear): Update to 2020.81.
2020-10-29gnu: Update samtools to 1.11.Roel Janssen
* gnu/packages/bioinformatics.scm (samtools): Update to 1.11.
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