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2024-05-05gnu: python-pandas: Default to version 2.x.Ricardo Wurmus
* gnu/packages/python-science.scm (python-pandas): Define as alias for python-pandas-2; rename existing definition to... (python-pandas-1): ...this new variable. Change-Id: If359e3b2d42c683d7d0152b1757bbc5a979c999b
2024-05-05gnu: python-scikit-opt: Add missing input.Ricardo Wurmus
* gnu/packages/python-science.scm (python-scikit-opt)[propagated-inputs]: Add python-pytorch. Change-Id: I037cc43bedeaebb05bf038c0bca72919f8c27c40
2024-05-05gnu: python-plastid: Replace nose with pytest.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-plastid)[native-inputs]: Replace python-nose with python-pytest. Change-Id: Ie0e5362d2304d3af0bcb1405fa0c1ad36fb2ace6
2024-05-05gnu: Add python-metacells.Marco Baggio
* gnu/packages/bioinformatics.scm (python-metacells): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I4fc760dc4317bde79c815f441ad0cc453248990a
2024-05-05gnu: Add python-cvxpy.Marco Baggio
* gnu/packages/python-science.scm (python-cvxpy): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I440ab3768cbc4e78364dc31cf9484effd9670f49
2024-05-05gnu: Add python-ecos.Marco Baggio
* gnu/packages/python-science.scm (python-ecos): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I83d9b746f5f3563f417efc5d18911f2eb04f201c
2024-05-05gnu: Add python-osqp.Marco Baggio
* gnu/packages/python-science.scm (python-osqp): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: Id6f1665505469fd6543046636b82d0730b319df3
2024-05-05gnu: Add python-qdldl.Marco Baggio
* gnu/packages/python-science.scm (python-qdldl): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I523ecb2292c9b514b548e2130d0d43bb77317b00
2024-05-05gnu: Add python-scs.Marco Baggio
* gnu/packages/python-science.scm (python-scs): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I6c5ecdac4b558aab4b8ee396dff1dfc9cdec07f0
2024-05-05gnu: Add python-fastcluster.Marco Baggio
* gnu/packages/python-science.scm (python-fastcluster): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: Ifc5229a4d00f581eb358a1f41fc3479fd1c33c2e
2024-05-05gnu: Add python-clarabel.Ricardo Wurmus
* gnu/packages/python-science.scm (python-clarabel): New variable. Change-Id: I28459162460ca9bf9e9557122f611c677afadc27
2024-05-05gnu: Add rust-amd-0.2.Ricardo Wurmus
* gnu/packages/crates-io.scm (rust-amd-0.2): New variable. Change-Id: I28d4e0d6bd9b590ca61df9152f91641408e48e5a
2024-05-05gnu: Add python-param.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-param): New variable. Change-Id: Idad928488d7c306c969b4484a3cd22661c41d488
2024-05-05gnu: Add python-multiscale-spatial-image.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-multiscale-spatial-image): New variable. Change-Id: I05a0b3a93091148917fade831faefb88c13bbc6f
2024-05-05gnu: Add python-colorcet.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-colorcet): New variable. Change-Id: I8b3f6d9a132d028f56330308b034d263e162f0f9
2024-05-05gnu: Add python-nbmake.Ricardo Wurmus
* gnu/packages/python-check.scm (python-nbmake): New variable. Change-Id: If062d0e34329e99b5bb87588e7ddf149c65bfdfb
2024-05-05gnu: Add python-pyct.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pyct): New variable. Change-Id: Ia207d5aa9d66fd2bf3616049c042fbb12e50928d
2024-05-05gnu: Add rust-blas-0.22.Ricardo Wurmus
* gnu/packages/crates-io.scm (rust-blas-0.22): New variable. Change-Id: Ic7bcbde20b6552659255f4ff11adde8fb1eeea45
2024-05-05gnu: Add rust-blas-sys-0.7.Ricardo Wurmus
* gnu/packages/crates-io.scm (rust-blas-sys-0.7): New variable. Change-Id: Ibfa2ab61256527e34e9ff9a8f7d871990ffbeda7
2024-05-05gnu: Add rust-lapack-0.19.Ricardo Wurmus
* gnu/packages/crates-io.scm (rust-lapack-0.19): New variable. Change-Id: I2c32db5e4028432e030005c7ee16773d0f052d21
2024-05-05gnu: Add rust-lapack-sys-0.14.Ricardo Wurmus
* gnu/packages/crates-io.scm (rust-lapack-sys-0.14): New variable. Change-Id: Id8fa94a06c231f3864040d2c428ac81042803adf
2024-05-05gnu: Add python-xarray-schema.Ricardo Wurmus
* gnu/packages/python-science.scm (python-xarray-schema): New variable. Change-Id: I4ca650f2c2872698fc22392add169f44b9e2e035
2024-05-05gnu: python-xarray-datatree: Add missing input.Ricardo Wurmus
* gnu/packages/python-science.scm (python-xarray-datatree)[native-inputs]: Add python-setuptools-scm. Change-Id: I86a7280ba687385edb15f30dae1a20e3811a0beb
2024-05-05gnu: python-pooch: Update to 1.8.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pooch): Update to 1.8.1. [arguments]: Enable tests, but not all of them. [build-system]: Use pyproject-build-system. [native-inputs]: Add python-pytest and python-setuptools-scm. [propagated-inputs]: Add python-platformdirs; remove python-appdirs and python-packaging. Change-Id: I3a0f73db5c0d78c9cee24c73402e9b1e34e26b4a
2024-05-05gnu: Add python-dask-image.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-dask-image): New variable. Change-Id: I77c22bba69d73ce39681064bfdcc05b2b360ea26
2024-05-05gnu: Revmoe go-github-com-syndtr-goleveldb.Sharlatan Hellseher
This package is a duplicate to go-github-com-syndtr-goleveldb-leveldb. * gnu/packages/ipfs.scm: Revmoe (gnu packages syncthing) module. (kubo) [inputs]: Replace go-github-com-syndtr-goleveldb with go-github-com-syndtr-goleveldb-leveldb. * gnu/packages/syncthing.scm (go-github-com-syndtr-goleveldb): Remove variable. Change-Id: I8641a18a3d97f570f3bbbd849f7dabdea4e41b01
2024-05-05gnu: go-go-uber-org-atomic: Update to 1.11.0.Sharlatan Hellseher
The upstream suggested to update to the latest version to resolve failing tests on RISK-V, see <https://github.com/uber-go/atomic/issues/164>. * gnu/packages/golang-xyz.scm (go-go-uber-org-atomic): Update to 1.11.0. [arguments]: <#:tests?>: Enable tests on all platforms. Change-Id: I6df21cfaebb9e4d4a609e93f3fe4bfea2bff5e8d
2024-05-05gnu: zsnes: Relocate to (gnu packages emulator).Maxim Cournoyer
* gnu/packages/games.scm (zsnes): Move to... * gnu/packages/emulators.scm (zsnes): ... here. Change-Id: I739e0f3b221790b6f780362d884209fff0aed3d7
2024-05-05gnu: mupen64plus-ui-console: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-ui-console): Update to 2.5.9. Change-Id: I9794dc81e0417c9879820400dbdb002faec35cdc
2024-05-05gnu: mupen64plus-video-z64: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-video-z64): Update to 2.5.9. [source]: Delete patches. * gnu/packages/patches/mupen64plus-video-z64-glew-correct-path.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. Change-Id: Ic8022c3a88f88f48644cc694e0a18c0b0a6745a1
2024-05-05gnu: mupen64plus-video-rice: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-video-rice): Update to 2.5.9. Change-Id: Ie2d26d6c62a09c0077e4c28869bf33b2c275d01f
2024-05-05gnu: mupen64plus-video-glide64mk2: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-video-glide64mk2): Update to 2.5.9. Change-Id: I77afdd1c954411203e75248d0d4bf4709db375bb
2024-05-05gnu: mupen64plus-video-arachnoid: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-video-arachnoid): Update to 2.5.9. Change-Id: I2751cca9a553029fbceba59762e498931a1f9946
2024-05-05gnu: mupen64plus-rsp-z64: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-rsp-z64): Update to 2.5.9. Change-Id: Ibf9b67d37506f742c50397ff269586df1636af4d
2024-05-05gnu: mupen64plus-rsp-hle: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-rsp-hle): Update to 2.5.9. Change-Id: I68c1f92fd2be820ba437696d61d064a97ed4581e
2024-05-05gnu: mupen64plus-input-sdl: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-input-sdl): Update to 2.5.9. Change-Id: Idec4c3633767d151101beeba3ef2317e54d3f6f4
2024-05-05gnu: mupen64plus-audio-sdl: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-audio-sdl): Update to 2.5.9. Change-Id: If888cf62ee2247438d47cd385d7812ad22fb8068
2024-05-05gnu: mupen64plus-core: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-core): Update to 2.5.9. [native-inputs]: Add nasm. Change-Id: I9960b697124c130e75f765d55e1ce8a56dda168b
2024-05-05gnu: mupen64plus-video-glide64: Update to 2.5.9.Maxim Cournoyer
* gnu/packages/emulators.scm (mupen64plus-video-glide64): Update to 2.5.9. [phases]: Delete use-sdl2 phase. Change-Id: Ic7359fb764f40fa25c553ab15e39f47963d3301b
2024-05-05services: guix: Use Shepherd 0.10 API for actions.Ludovic Courtès
The ‘action’ method was deprecated in Shepherd 0.10.0. * gnu/services/base.scm (shepherd-set-http-proxy-action) (shepherd-discover-action): Use ‘perform-service-action’ instead of the now-deprecated ‘action’ method. Change-Id: Ibe1c79a44148596292c2c8907011ec787f8a9ddd
2024-05-04gnu: guix-configuration: Improve offload build-machines.Ian Eure
It’s currently difficult to programmatically add a build-machine, because the `service-extension' mechanism is the only facility which can do that. It relies on the `guix-service-type', ala: (service-extension guix-service-type (guix-extension (build-machines (list ...)))) ...but `guix-service-type' is already instantiated as part of `%base-services', and replacing it may lose other configuration, like substitute servers and authorized keys. Additionally, a default value of `#f' for the build-machines field requires guarding uses of the field with: (or (guix-build-machines config) '()) Changing the default to be the empty list avoids that. One can now add build-machines with code such as: (modify-services %base-services (guix-service-type config => (guix-configuration (inherit config) (authorized-keys (cons %build-machine-key (guix-configuration-authorized-keys config))) (build-machines (cons #~(build-machine ...) (guix-configuration-build-machines config)))))) * gnu/services/base.scm (guix-configuration): Rename `guix-build-machines' to `guix-configuration-build-machines' and export it. Change the default from `#f' to the empty list. * gnu/services/base.scm (guix-activation): Update the build-machines test and reverse the conditions. Change-Id: I6780c6a5579fd9d4b4f22ee2b2bf7ba7a0454407 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: gnucash: Update to 5.6.Steve George
* gnu/packages/gnucash.scm (gnucash): Update to 5.6. Change-Id: I3646082d628470327fbd9deec6111de8c1eec921 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: perl-finance-quote: Update perl-finance-quote.Steve George
* gnu/packages/web.scm (perl-finance-quote): Update to 1.59. [source] remove patch * gnu/packages/patches/perl-finance-quote-unuse-mozilla-ca.patch: Remove file. Change-Id: I3646082d628470327fbd9deec6111de8c1eec921 Change-Id: Ibe50f9736bcbe4e628c05f86c0e0be8bd335d4c8 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-spreadsheet-xlsx.Steve George
* gnu/packages/perl.scm (perl-spreadsheet-xlsx): New variable. Change-Id: Iec4fc26945bd2f154587d4b13b593fd947bb0e5a Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-spreadsheet-parseexcel.Steve George
* gnu/packages/perl.scm (perl-spreadsheet-parseexcel): New variable. Change-Id: I0dfbf49f4b8b1865a738edc805d3dc83b038a124 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-digest-perl-md5.Steve George
* gnu/packages/perl.scm (perl-digest-perl-md5): New variable. Change-Id: Ic656fef7bbc77790d114812f0c9dcafa1586e357 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-html-tokeparser-simple.Steve George
* gnu/packages/web.scm (perl-html-tokeparser-simple): New variable. Change-Id: If779dbe29de05697d87143b38d986d5ff7fa2c8f Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-sub-override.Steve George
* gnu/packages/crates-io.scm (perl-sub-override): New variable. Change-Id: I5a366862bb5bfd777094e2d58239d50aad95577c -- >8 -- Originally part of https://issues.guix.gnu.org/44447 Change-Id: Ib4542ceedcff114e1184fc8bafac0f76985b78be Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-string-util.Steve George
* gnu/packages/perl.scm (perl-string-util): New variable. Change-Id: Iaef13963efb3d795bcc0c16bcdd72c112894f886 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-05-04gnu: Add perl-web-scraper.Steve George
* gnu/packages/web.scm (perl-web-scraper): New variable. Change-Id: I3d0a476ca6c09bc20391303f99b260410f16de65 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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