| Age | Commit message (Collapse) | Author |
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* gnu/packages/bioconductor.scm (r-champ): Update to 2.30.0.
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* gnu/packages/bioconductor.scm (r-category): Update to 2.66.0.
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* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.48.0.
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* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.68.0.
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* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-biomart): Update to 2.56.0.
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* gnu/packages/bioconductor.scm (r-biobase): Update to 2.60.0.
[native-inputs]: Add r-knitr.
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* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.30.0.
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* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.8.0.
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* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.42.0.
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* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-annotate): Update to 1.78.0.
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* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-affyio): Update to 1.70.0.
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* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.76.0.
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* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.0.
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* gnu/packages/bioconductor.scm (r-italics): Update to 2.60.0.
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* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 1.21.0.
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* gnu/packages/bioconductor.scm (r-iranges): Update to 2.34.0.
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* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.36.0.
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* gnu/packages/bioconductor.scm (r-bluster): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-dss): Update to 2.48.0.
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* gnu/packages/bioconductor.scm (r-drimseq): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-dmrcate): Update to 2.14.0.
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* gnu/packages/bioconductor.scm (r-derfinderhelper): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.25.0.
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* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.46.0.
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* gnu/packages/bioconductor.scm (r-decoupler): Update to 2.6.0.
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* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-decontam): Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-deconrnaseq): Update to 1.42.0.
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* gnu/packages/bioconductor.scm (r-decomptumor2sig): Update to 2.16.0.
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* gnu/packages/bioconductor.scm (r-decipher): Update to 2.28.0.
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* gnu/packages/bioconductor.scm (r-debcam): Update to 1.18.0.
[source]: Delete bundled Java archives.
[arguments]: Add phase 'build-jar; add phase 'strip-jar-timestamps; do a fake
installation and disable tests due to a regression in R 4.3.0.
[inputs]: Replace openjdk with icedtea:jdk; add java-pj.
[native-inputs]: Add zip.
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* gnu/packages/java.scm (java-pj): New variable.
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* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-damefinder): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-dama): Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.42.0.
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* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.38.0.
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* gnu/packages/bioconductor.scm (r-cardelino): Update to 1.2.0.
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* gnu/packages/bioconductor.scm (r-breakpointr): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.46.0.
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* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.17.1.
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