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2019-03-26gnu: docker: Add comment.Danny Milosavljevic
* gnu/packages/patches/docker-use-fewer-modprobes.patch: Add comment.
2019-03-26packages: Adjust to new calling convention for "thunked" fields.Ludovic Courtès
Fixes <https://bugs.gnu.org/34995>. This is a followup to abd4d6b33dba4de228e90ad15a8efb456fcf7b6e. * guix/packages.scm (package->bag): Adjust calls to INPUTS, PROPAGATED-INPUTS, NATIVE-INPUTS, and ARGS, passing them SELF as an argument. * gnu/packages/gnucash.scm (gnucash)[arguments]: Use (package-inputs this-record) intead of (inputs). * gnu/packages/version-control.scm (git)[arguments]: Likewise.
2019-03-25gnu: gzdoom: Update to 3.7.2.nee
* gnu/packages/games.scm (gzdoom): Update to 3.7.2. [source](uri): Update path. [source](snippet): Bundled libjpeg directory has been renamed. Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2019-03-25system: Add 'essential-services' field to <operating-system>.Ludovic Courtès
* gnu/system.scm (<operating-system>)[essential-services]: New field. (operating-system-directory-base-entries): Remove #:container? keyword and keep only the not-container branch. (essential-services): Likewise. (operating-system-services): Likewise, and call 'operating-system-essential-services' instead of 'essential-services'. (operating-system-activation-script): Remove #:container?. (operating-system-boot-script): Likewise. (operating-system-derivation): Likewise. * gnu/system/linux-container.scm (container-essential-services): New procedure. (containerized-operating-system): Use it and set the 'essential-services' field. (container-script): Remove call to 'operating-system-derivation'. * gnu/system/vm.scm (system-docker-image): Likewise. * doc/guix.texi (operating-system Reference): Document 'essential-services'.
2019-03-25accounts: Add default value for the 'home-directory' field of <user-account>.Ludovic Courtès
* gnu/system/accounts.scm (<user-account>)[home-directory]: Mark as thunked and add a default value. (default-home-directory): New procedure. * doc/guix.texi (User Accounts): Remove 'home-directory' from example. * gnu/system/examples/bare-bones.tmpl: Likewise. * gnu/system/examples/beaglebone-black.tmpl: Likewise. * gnu/system/examples/desktop.tmpl: Likewise. * gnu/system/examples/docker-image.tmpl: Likewise. * gnu/system/examples/lightweight-desktop.tmpl: Likewise. * gnu/system/install.scm (installation-os): Likewise. * gnu/tests.scm (%simple-os): Likewise. * gnu/tests/install.scm (%minimal-os, %minimal-os-on-vda): (%separate-home-os, %encrypted-root-os, %btrfs-root-os): Likewise. * tests/accounts.scm ("allocate-passwd") ("allocate-passwd with previous state"): Likewise.
2019-03-25installer: Set the system's 'keyboard-layout' field.Ludovic Courtès
* gnu/installer/newt/keymap.scm (keyboard-layout->configuration): New procedure. * gnu/installer.scm (compute-keymap-step): Return RESULT. (installer-steps) <'keymap>: Add 'configuration-formatter' field. (installer-program): Use (gnu installer newt keymap). * gnu/installer/parted.scm (bootloader-configuration): Set 'keyboard-layout'.
2019-03-25gnu: guix: Update to f970946.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to f970946.
2019-03-25gnu: docker: Use fewer modprobes.Danny Milosavljevic
Fixes <https://bugs.gnu.org/34333>. Reported by Allan Adair <allan@adair.io>. * gnu/packages/patches/docker-use-fewer-modprobes.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/docker.scm (docker)[source]: Use it.
2019-03-25gnu: nano: Update to 4.0.Leo Famulari
* gnu/packages/nano.scm (nano): Update to 4.0.
2019-03-25services: SDDM: Specify absolute path to the X server.Marius Bakke
I'm not sure how this service ever worked, but SDDM started consistently failing on one machine seemingly because of this setting. * gnu/services/sddm.scm (sddm-configuration-file): Append /bin/X to the ServerPath setting.
2019-03-25gnu: Add r-svmisc.Ricardo Wurmus
* gnu/packages/cran.scm (r-svmisc): New variable.
2019-03-25gnu: Add r-rjava.Ricardo Wurmus
* gnu/packages/cran.scm (r-rjava): New variable.
2019-03-25gnu: Add r-r2html.Ricardo Wurmus
* gnu/packages/cran.scm (r-r2html): New variable.
2019-03-25gnu: Add r-sampling.Ricardo Wurmus
* gnu/packages/cran.scm (r-sampling): New variable.
2019-03-25gnu: r-gsl: Update to 2.1-6.Ricardo Wurmus
* gnu/packages/cran.scm (r-gsl): Update to 2.1-6.
2019-03-25gnu: Add r-sigpathway.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sigpathway): New variable.
2019-03-25gnu: Add r-anota.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anota): New variable.
2019-03-25gnu: Add r-gosemsim.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gosemsim): New variable.
2019-03-25gnu: Add r-heatplus.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-heatplus): New variable.
2019-03-25gnu: Add r-varianttools.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-varianttools): New variable.
2019-03-25gnu: Add r-triform.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-triform): New variable.
2019-03-25gnu: Add r-hapassoc.Ricardo Wurmus
* gnu/packages/cran.scm (r-hapassoc): New variable.
2019-03-25gnu: Add r-hierfstat.Ricardo Wurmus
* gnu/packages/cran.scm (r-hierfstat): New variable.
2019-03-25gnu: Add brightnessctl.Vagrant Cascadian
* gnu/packages/linux.scm (brightnessctl): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-25gnu: r-gkmsvm: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gkmsvm): Move from here... * gnu/packages/bioconductor.scm (r-gkmsvm): ...to here.
2019-03-25gnu: r-kernlab: Move to (gnu packages cran).Ricardo Wurmus
* gnu/packages/machine-learning.scm (r-kernlab): Move from here... * gnu/packages/cran.scm (r-kernlab): ...to here.
2019-03-25gnu: r-wgcna: Move to (gnu packages cran).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-wgcna): Move from here... * gnu/packages/cran.scm (r-wgcna): ...to here.
2019-03-25gnu: r-optparse: Move to (gnu packages cran).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-optparse): Move from here... * gnu/packages/cran.scm (r-optparse): ...to here.
2019-03-25gnu: r-bookdown: Move to (gnu packages cran).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bookdown): Move from here... * gnu/packages/cran.scm (r-bookdown): ...to here.
2019-03-25gnu: r-sparql: Move to (gnu packages cran).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-sparql): Move from here... * gnu/packages/cran.scm (r-sparql): ...to here.
2019-03-25gnu: Add r-tdthap.Ricardo Wurmus
* gnu/packages/cran.scm (r-tdthap): New variable.
2019-03-25gnu: Add r-hwde.Ricardo Wurmus
* gnu/packages/cran.scm (r-hwde): New variable.
2019-03-25gnu: Add r-ldheatmap.Ricardo Wurmus
* gnu/packages/cran.scm (r-ldheatmap): New variable.
2019-03-25gnu: Add r-dlmap.Ricardo Wurmus
* gnu/packages/cran.scm (r-dlmap): New variable.
2019-03-25gnu: Add r-ibdreg.Ricardo Wurmus
* gnu/packages/cran.scm (r-ibdreg): New variable.
2019-03-25gnu: Add r-bqtl.Ricardo Wurmus
* gnu/packages/cran.scm (r-bqtl): New variable.
2019-03-25gnu: perl-svg: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-svg)[source]: Update URL.
2019-03-25gnu: perl-class-date: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-class-date)[source]: Update URL.
2019-03-25gnu: perl-mouse: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-mouse)[source]: Update URL.
2019-03-25gnu: perl-carp: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-carp)[source]: Update URL.
2019-03-25gnu: perl-class-accessor-grouped: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-class-accessor-grouped)[source]: Update URL.
2019-03-25gnu: perl-base: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-base)[source]: Update URL.
2019-03-25gnu: perl-datetime-calendar-julian: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-datetime-calendar-julian)[source]: Update URL.
2019-03-25gnu: perl-carp-clan: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-carp-clan)[source]: Update URL.
2019-03-25gnu: perl-class-c3-componentised: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-class-c3-componentised)[source]: Update URL.
2019-03-25gnu: perl-plack-test-externalserver: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-plack-test-externalserver)[source]: Update URL.
2019-03-25gnu: perl-moosex-emulate-class-accessor-fast: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-moosex-emulate-class-accessor-fast) [source]: Update URL.
2019-03-25gnu: perl-log-any: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-log-any)[source]: Update URL.
2019-03-25gnu: perl-file-temp: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-file-temp)[source]: Update URL.
2019-03-25gnu: perl-object-signature: Update source URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-object-signature)[source]: Update URL.
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