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2019-05-06gnu: r-beachmat: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0. [inputs]: Remove hdf5 and zlib. [propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.
2019-05-06gnu: r-singlecellexperiment: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.6.0.
2019-05-06gnu: r-scater: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0. [propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr, r-reshape2, and r-rhdf5lib.
2019-05-06gnu: r-scran: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0. [propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.
2019-05-06gnu: r-delayedmatrixstats: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.0.
2019-05-06gnu: Add r-biocfilecache.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
2019-05-06gnu: r-interactivedisplaybase: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.22.0.
2019-05-06gnu: r-edaseq: Update to 2.18.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.18.0.
2019-05-06gnu: r-deseq: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.36.0.
2019-05-06gnu: r-aroma-light: Update to 3.14.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.14.0.
2019-05-06gnu: r-msnid: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.18.0.
2019-05-06gnu: r-msnbase: Update to 2.10.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.10.0.
2019-05-06gnu: r-pcamethods: Update to 1.76.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.76.0.
2019-05-06gnu: r-mzid: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.22.0.
2019-05-06gnu: r-vsn: Update to 3.52.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.52.0.
2019-05-06gnu: r-affy: Update to 1.62.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.62.0.
2019-05-06gnu: r-affyio: Update to 1.54.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.54.0.
2019-05-06gnu: r-mzr: Update to 2.18.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.18.0.
2019-05-06gnu: r-protgenerics: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.16.0.
2019-05-06gnu: r-sva: Update to 3.32.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.0.
2019-05-06gnu: r-copywriter: Update to 2.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.16.0.
2019-05-06gnu: r-chipseq: Update to 1.34.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.34.0.
2019-05-06gnu: r-annotationfilter: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.8.0.
2019-05-06gnu: r-rhdf5: Update to 2.28.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.28.0.
2019-05-06gnu: r-tximport: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.0.
2019-05-06gnu: r-mutationalpatterns: Update to 1.10.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.10.0.
2019-05-06gnu: r-bamsignals: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.16.0.
2019-05-06gnu: r-rhtslib: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1.
2019-05-06gnu: r-zlibbioc: Update to 1.30.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0.
2019-05-06gnu: r-motifrg: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0.
2019-05-06gnu: r-seqlogo: Update to 1.50.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0.
2019-05-06gnu: r-genomation: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.16.0.
2019-05-06gnu: r-seqpattern: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.16.0.
2019-05-06gnu: r-bsgenome: Update to 1.52.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.52.0.
2019-05-06gnu: r-topgo: Update to 2.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.36.0.
2019-05-06gnu: r-genomicfeatures: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.0.
2019-05-06gnu: r-rtracklayer: Update to 1.44.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.0.
2019-05-06gnu: r-genomicalignments: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.0.
2019-05-06gnu: r-summarizedexperiment: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.0.
2019-05-06gnu: r-delayedarray: Update to 0.10.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.10.0. [propagated-inputs]: Add r-matrix.
2019-05-06gnu: r-biostrings: Update to 2.52.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.52.0.
2019-05-06gnu: r-biocparallel: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.0.
2019-05-06gnu: r-biomart: Update to 2.40.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.0.
2019-05-06gnu: r-annotationdbi: Update to 1.46.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.0.
2019-05-06gnu: r-biobase: Update to 2.44.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.44.0.
2019-05-06gnu: r-genomicranges: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.0.
2019-05-06gnu: r-xvector: Update to 0.24.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.24.0.
2019-05-06gnu: r-limma: Update to 3.40.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.0.
2019-05-06gnu: r-variantannotation: Update to 1.30.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.0. [propagated-inputs]: Add r-rhtslib.
2019-05-06gnu: r-edger: Update to 3.26.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.0.
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