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2023-05-06gnu: node-resolve-protobuf-schema: Ignore development dependencies.Jelle Licht
* gnu/packages/node-xyz.scm (node-resolve-protobuf-schema)[arguments]<phases>: Explicitly patch out development dependencies. Re-enable configure phase.
2023-05-06gnu: node-protocol-buffers-schema: Ignore development dependencies.Jelle Licht
* gnu/packages/node-xyz.scm (node-protocol-buffers-schema)[arguments]<phases>: Explicitly patch out development dependencies. Re-enable configure phase.
2023-05-06gnu: node-pbf: Ignore development dependencies.Jelle Licht
* gnu/packages/node-xyz.scm (node-pbf)[arguments]<phases>: Explicitly patch out development dependencies. Re-enable configure phase.
2023-05-06gnu: node-minimist: Ignore development dependencies.Jelle Licht
* gnu/packages/node-xyz.scm (node-minimist)[arguments]<phases>: Explicitly patch out development dependencies. Re-enable configure phase.
2023-05-06gnu: node-crx3: Ignore development dependencies.Jelle Licht
* gnu/packages/node-xyz.scm (node-crx3)[arguments]<phases>: Explicitly patch out development dependencies. Re-enable configure phase.
2023-05-06gnu: node-buffer-crc32: Ignore development dependencies.Jelle Licht
* gnu/packages/node-xyz.scm (node-acorn)[arguments]<phases>: Explicitly patch out development dependencies. Re-enable configure phase.
2023-05-06gnu: node-acorn: Fix broken transpilation.Jelle Licht
* gnu/packages/node-xyz.scm (node-acorn)[native-inputs]: Add `esbuild'. [arguments]<phases>: Replace build phase by custom `esbuild' invocations.
2023-05-06gnu: node-acorn: Remove lifecycle script.Jelle Licht
* gnu/packages/node-xyz.scm (node-acorn)[arguments]<modules>: New argument. <phases>: Patch out unused 'prepare' script that breaks dependents.
2023-05-06gnu: node-acorn: Disable tests.Jelle Licht
* gnu/packages/node-xyz.scm (node-acorn): Explicitly disable tests.
2023-05-06services: guix-build-coordinator: Simpify service startup.Christopher Baines
Take advantage of changes in the build coordinator to reduce the complexity of the service startup script. * gnu/services/guix.scm (make-guix-build-coordinator-start-script): Remove the metrics registry and datastore.
2023-05-06gnu: guix-build-coordinator: Update to 0-80.d030cac.Christopher Baines
* gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-80.d030cac.
2023-05-06gnu: guix-data-service: Update to 0.0.1-40.3734a85Christopher Baines
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-40.3734a85.
2023-05-06gnu: rizin: Fix build.宋文武
* gnu/packages/engineering.scm (rizin)[arguments]: Skip failing tests.
2023-05-06gnu: mupdf: Simplify snippet.Timotej Lazar
* gnu/packages/pdf.scm (mupdf)[source]: Simplify code to remove unused thirdparty libs. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-06gnu: mupdf: Update to 1.22.0.Timotej Lazar
* gnu/packages/pdf.scm (mupdf): Update to 1.22.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-05gnu: git-crypt: Fix build issues on OpenSSL 3.Sergey Trofimov
* gnu/packages/version-control.scm (git-crypt)[arguments]: In 'build' phase, set 'CXXFLAGS'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-05gnu: lttng-tools: Fix build failure.Olivier Dion
* gnu/packages/instrumentation.scm (lttng-tools) [native-inputs]: Add autoconf, automake, libtool. [arguments]: Add 'autoreconf build phase before 'configure. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-05gnu: bear: Build against 'abseil-cpp-cxxstd11'.Andrew Whatson
Fixes a linker error when building bear, caused by incompatibility between abseil-cpp used by bear and abseil-cpp-cxxstd11 used by grpc. * gnu/packages/build-tools.scm (bear)[native-inputs]: Use ABSEIL-CPP-CXXSTD11. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-05gnu: guile2.0-shepherd: Remove.Ludovic Courtès
Version 0.9.x of the Shepherd requires Guile >= 2.2. * gnu/packages/admin.scm (guile2.0-shepherd): Remove.
2023-05-05Revert "gnu: Add python-gimmemotifs."Ricardo Wurmus
This reverts commit dc8b3ebe5d4ba2a39c12f62d836963ffee1e4b47. python-gimmemotifs is not usable without proprietary third-party tools.
2023-05-05gnu: gcc-11: Fix patch-hurd-libpthread phase.Christopher Baines
It didn't work when it was introduced in 08acdd0765b5f4fbfafa699a823ea7985d4d35a7. * gnu/packages/gcc.scm (gcc-11)[arguments]: Remove the procedure arguments, and use %build-inputs rather than inputs. * gnu/packages/commencement.scm (gcc-boot0)[native-inputs]: Add hurd-patch, as this package inherits from gcc-11.
2023-05-05gnu: Add python-gimmemotifs.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-gimmemotifs): New variable.
2023-05-05gnu: Add python-norns.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-norns): New variable.
2023-05-05gnu: Add python-xdg.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-xdg): New variable.
2023-05-05gnu: Add python-qnorm.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-qnorm): New variable.
2023-05-05gnu: Add python-biofluff.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-biofluff): New variable.
2023-05-05gnu: Add python-genomepy.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-genomepy): New variable.
2023-05-05gnu: Add python-filelock-3.5.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-filelock-3.5): New variable.
2023-05-05gnu: Add python-logomaker.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-logomaker): New variable.
2023-05-05gnu: Add python-mysql-connector-python.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-mysql-connector-python): New variable.
2023-05-05gnu: Add protobuf-3.20.Ricardo Wurmus
* gnu/packages/protobuf.scm (protobuf-3.20): New variable.
2023-05-05gnu: Add python-palettable.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-palettable): New variable.
2023-05-05gnu: python-pyfaidx: Update to 0.7.2.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pyfaidx): Update to 0.7.2.1. [build-system]: Use pyproject-build-system. [arguments]: Ignore tests that require large downloads. [native-inputs]: Remove python-six; add python-fsspec, python-pytest, python-pytest-cov, python-mock, and python-numpy.
2023-05-05gnu: python-sanic: Disable failing SSL tests.Lars-Dominik Braun
Best guess is that they check for broken behavior in one of the dependencies, which has changed. * gnu/packages/python-web.scm (python-sanic)[arguments]: Disable more tests.
2023-05-05gnu: python-gssapi: Update to 1.8.2.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-gssapi): Update to 1.8.2. [native-inputs]: Add python-cython.
2023-05-05gnu: python-k5test: Update to 0.10.3.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-k5test): Update to 0.10.3.
2023-05-05gnu: python-atpublic: Update to 3.1.1.Lars-Dominik Braun
* gnu/packages/python-check.scm (python-atpublic): Update to 3.1.1. [build-system]: Switch to pyproject-build-system. [arguments]: Remove #:phases, override build backend. [native-inputs]: Replace nose2 with pytest, add python-pdm-backend, python-sybil and python-pytest-cov.
2023-05-05gnu: Add python-pdm-backend.Lars-Dominik Braun
* gnu/packages/python-build.scm (python-pdm-backend): New variable.
2023-05-05gnu: guix: Update to dc5430c.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to dc5430c.
2023-05-04gnu: python-fs: Remove indirect dependency on Rust when unsupported.Ludovic Courtès
This allows to build font-abattis-cantarell on aarch64-linux. * gnu/packages/python-xyz.scm (python-fs)[arguments]: Add #:tests?. [native-inputs]: Turn into the empty list when cross-compiling or when PYTHON-PYFTPDLIB is not supported.
2023-05-04gnu: psautohint: Remove unneeded dependencies.Ludovic Courtès
* gnu/packages/fontutils.scm (psautohint)[native-inputs]: Remove PYTHON-FS and PYTHON-PYTEST-RANDOMLY.
2023-05-04services: qemu-binfmt: Add more targets.Efraim Flashner
* gnu/services/virtualization.scm (%i486, %sparc64, %aarch64be, %xtensa, %xtensaeb, %microblaze, %microblazeel, %or1k, %hexagon, %loongson64): New variables. (%armeb): Correct family field. (%qemu-platforms): Add them.
2023-05-04services: earlyoom: Rotate log files.Efraim Flashner
* gnu/services/linux.scm (%earlyoom-log-rotation): New variable. (earlyoom-service-type): Add service-extension for log rotation.
2023-05-04gnu: vifm: Update to 0.13.Efraim Flashner
* gnu/packages/vim.scm (vifm): Update to 0.13. [arguments]: Adjust substitutions in custom 'patch-test-shebangs phase.
2023-05-04gnu: python-screed: Update to 1.1.2.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (python-screed): Update to 1.1.2. [build-system]: Use pyproject-build-system. [native-inputs]: Remove python-pytest. [inputs]: Remove python-bz2file. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-05-04gnu: Add python-goatools.Navid Afkhami
* gnu/packages/bioinformatics.scm (python-goatools): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-05-04gnu: Add r-rcircos.Navid Afkhami
* gnu/packages/cran.scm (r-rcircos): New variable.
2023-05-04gnu: Add python-diff-cover.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-diff-cover): New variable.
2023-05-04gnu: Add python-loguru.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-loguru): New variable.
2023-05-04gnu: Add python-pytest-mypy-plugins.Ricardo Wurmus
* gnu/packages/check.scm (python-pytest-mypy-plugins): New variable.
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