aboutsummaryrefslogtreecommitdiff
path: root/gnu
AgeCommit message (Expand)Author
2024-04-10gnu: r-seqarray: Update to 1.42.4....* gnu/packages/bioconductor.scm (r-seqarray): Update to 1.42.4. Change-Id: I3663ed7550bdd11e2f23b0497c7bbeb2d5c6cd41 Ricardo Wurmus
2024-04-10gnu: r-gsva: Update to 1.50.2....* gnu/packages/bioconductor.scm (r-gsva): Update to 1.50.2. Change-Id: I24cb1b80f6afc34c970f402292a326e7ec592534 Ricardo Wurmus
2024-04-10gnu: r-annotationhub: Update to 3.10.1....* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.10.1. Change-Id: Ibe0b4d197a17514072febc97ef8eac684d884b67 Ricardo Wurmus
2024-04-10gnu: r-bambu: Update to 3.4.1....* gnu/packages/bioconductor.scm (r-bambu): Update to 3.4.1. Change-Id: I888802cc0b75876378c59abba72442bb5927010a Ricardo Wurmus
2024-04-10gnu: r-dt: Update to 0.33....* gnu/packages/statistics.scm (r-dt): Update to 0.33. Change-Id: Ice2557633414595dfd4d55d996fa83a7d80a0b3a Ricardo Wurmus
2024-04-10gnu: r-rcpparmadillo: Update to 0.12.8.2.0....* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.8.2.0. Change-Id: I094907765b56a97e59fbfd3a871def732c1965cd Ricardo Wurmus
2024-04-10gnu: r-knitr: Update to 1.46....* gnu/packages/statistics.scm (r-knitr): Update to 1.46. Change-Id: I0f6cfb86353558514fdb0e50f5626ad493e5bf1f Ricardo Wurmus
2024-04-10gnu: r-delaporte: Update to 8.4.0....* gnu/packages/cran.scm (r-delaporte): Update to 8.4.0. Change-Id: Iaa241222b4c4d84bb9ded7603f7e5cdf857e40be Ricardo Wurmus
2024-04-10gnu: r-stars: Update to 0.6-5....* gnu/packages/cran.scm (r-stars): Update to 0.6-5. Change-Id: I459475640f0626136c7c1b72528f9e38f7dd1b19 Ricardo Wurmus
2024-04-10gnu: r-scatterpie: Update to 0.2.2....* gnu/packages/cran.scm (r-scatterpie): Update to 0.2.2. Change-Id: Iefea7b841a419a129ed69d436b80bf59a7ec8c3f Ricardo Wurmus
2024-04-10gnu: r-rsconnect: Update to 1.2.2....* gnu/packages/cran.scm (r-rsconnect): Update to 1.2.2. [propagated-inputs]: Add r-pki. Change-Id: I6dcc1b5566be6117e957366f66e0af35c2242718 Ricardo Wurmus
2024-04-10gnu: r-quanteda: Update to 4.0.1....* gnu/packages/cran.scm (r-quanteda): Update to 4.0.1. [inputs]: Add tbb. [propagated-inputs]: Remove r-rcppparallel; add r-lifecycle. [native-inputs]: Add pkg-config. Change-Id: I988b076f65801c9e9f7ebe3fa6d19566aea6308a Ricardo Wurmus
2024-04-10gnu: r-proxyc: Update to 0.4.1....* gnu/packages/cran.scm (r-proxyc): Update to 0.4.1. [inputs]: Add tbb. [propagated-inputs]: Remove r-rcppparallel. Change-Id: I091b340d9defc5876ab7187b7f890cb839fb23b8 Ricardo Wurmus
2024-04-10gnu: r-dae: Update to 3.2.25....* gnu/packages/cran.scm (r-dae): Update to 3.2.25. [propagated-inputs]: Add r-trycatchlog. Change-Id: I9dfc382185a6f83586fcfa35c9969036cf66193a Ricardo Wurmus
2024-04-10gnu: r-styler: Update to 1.10.3....* gnu/packages/cran.scm (r-styler): Update to 1.10.3. Change-Id: I59909dfd5534863eef1a8502dd76c9c172914d56 Ricardo Wurmus
2024-04-10gnu: r-nor1mix: Update to 1.3-3....* gnu/packages/cran.scm (r-nor1mix): Update to 1.3-3. Change-Id: Ie05b87763a47339c713b3a3c9d4f5c4238f26bd9 Ricardo Wurmus
2024-04-10gnu: r-tmb: Update to 1.9.11....* gnu/packages/cran.scm (r-tmb): Update to 1.9.11. Change-Id: I2168b4a7452ae277eacd7414049ee6fd1429c3ca Ricardo Wurmus
2024-04-10gnu: r-emmeans: Update to 1.10.1....* gnu/packages/cran.scm (r-emmeans): Update to 1.10.1. Change-Id: I8d072fdf667a6a267ddc4aeb173db6b88996ff85 Ricardo Wurmus
2024-04-10gnu: r-ggstance: Update to 0.3.7....* gnu/packages/cran.scm (r-ggstance): Update to 0.3.7. Change-Id: I29c3f248afc717cf6e623db1d9a6e3cd19fe055f Ricardo Wurmus
2024-04-10gnu: r-promises: Update to 1.3.0....* gnu/packages/cran.scm (r-promises): Update to 1.3.0. Change-Id: I50c005b222d1beac05e14bf98e719c5e0b06eaf4 Ricardo Wurmus
2024-04-10gnu: r-smoother: Update to 1.3....* gnu/packages/cran.scm (r-smoother): Update to 1.3. Change-Id: Ia428b5c8c2896cfdae1445d0dbbe19e75c23ac77 Ricardo Wurmus
2024-04-10gnu: r-argparser: Update to 0.7.2....* gnu/packages/cran.scm (r-argparser): Update to 0.7.2. Change-Id: I2dd93ed20822070b92fe48d4400eb4e87543d5a2 Ricardo Wurmus
2024-04-10gnu: r-hardyweinberg: Update to 1.7.8....* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.8. [native-inputs]: Add r-knitr and r-rmarkdown. Change-Id: I877343e49057c8218adcfcf44ad42c26556829fb Ricardo Wurmus
2024-04-10gnu: r-pvclust: Update to 2.2-0....* gnu/packages/cran.scm (r-pvclust): Update to 2.2-0. Change-Id: Ia3397baada3ca9ca0546be7d717f96004c214566 Ricardo Wurmus
2024-04-10gnu: r-htmltools: Update to 0.5.8.1....* gnu/packages/cran.scm (r-htmltools): Update to 0.5.8.1. Change-Id: Ib40ad8eb79e10247d306196894ad4e03c04a582e Ricardo Wurmus
2024-04-10gnu: r-secretbase: Update to 0.4.0....* gnu/packages/cran.scm (r-secretbase): Update to 0.4.0. Change-Id: I60499def8f224bb93944448e0c23186641c2c892 Ricardo Wurmus
2024-04-10gnu: r-rticles: Update to 0.27....* gnu/packages/cran.scm (r-rticles): Update to 0.27. Change-Id: I7191c908b8df1c98293daa152927a77b91e8dac7 Ricardo Wurmus
2024-04-10gnu: r-ggstatsplot: Update to 0.12.3....* gnu/packages/cran.scm (r-ggstatsplot): Update to 0.12.3. Change-Id: If7ff6313571682ef2380acaca82038539dbca48c Ricardo Wurmus
2024-04-10gnu: r-ggstats: Update to 0.6.0....* gnu/packages/cran.scm (r-ggstats): Update to 0.6.0. Change-Id: I9997cc7342f829339b8461d609d84dc76057692b Ricardo Wurmus
2024-04-10gnu: r-broom-helpers: Update to 1.15.0....* gnu/packages/cran.scm (r-broom-helpers): Update to 1.15.0. Change-Id: I7761a057a694119f56c3e2bd5dd6f0702136d975 Ricardo Wurmus
2024-04-10gnu: r-codedepends: Update to 0.6.6....* gnu/packages/bioconductor.scm (r-codedepends): Update to 0.6.6. [native-inputs]: Add r-knitr. Change-Id: I38378f3c7406166007da48eed749526d6ddb9277 Ricardo Wurmus
2024-04-10gnu: r-valr: Update to 0.8.0....* gnu/packages/bioconductor.scm (r-valr): Update to 0.8.0. Change-Id: I9d5a7d2c3600f82db4b291af1485f9d075d26627 Ricardo Wurmus
2024-04-10gnu: Add r-pki....* gnu/packages/cran.scm (r-pki): New variable. Change-Id: Ic8bd9a449b040e66093939e2d64b05e4f97f9bd3 Ricardo Wurmus
2024-04-10gnu: Add r-trycatchlog....* gnu/packages/cran.scm (r-trycatchlog): New variable. Change-Id: I092c8ada3e139e21e07f000041a5e2fc345af977 Ricardo Wurmus
2024-04-10gnu: plasma: Fix QtQuickControls2 theme....Suggested in <https://github.com/NixOS/nixpkgs/issues/79713>. * gnu/packages/kde-plasma.scm (plasma)[propagated-inputs]: Add qqc2-desktop-style. Change-Id: I6bbed3ddaa339c25a996b6ab74acbc3179e28269 Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Zheng Junjie
2024-04-10gnu: falkon: Enable KDE Frameworks Integration plugin....* gnu/packages/kde-internet.scm (falkon)[inputs]: Add kcoreaddons and kcrash. Change-Id: I5cacc660daea8167bb072c41875d29fbf2caf74b Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Sughosha
2024-04-10gnu: kdelibs4support: Fix tests....Reported in: <https://issues.guix.gnu.org/70100> <https://issues.guix.gnu.org/70176> * gnu/packages/kde-frameworks.scm (kdelibs4support)[source]: Add snippet. Change-Id: I12e16b8003e9b7e857492e51105d7c3580e1c35f 宋文武
2024-04-09gnu: netpbm: Fix build on powerpc-linux....* gnu/packages/netpbm.scm (netpbm)[arguments]: Adjust the 'setup-check phase to skip 2 tests when building for powerpc-linux. Change-Id: Ie8f23bed0f5d442df3a19e227bbdc3a17fa77511 Efraim Flashner
2024-04-09gnu: vale: Unbundle more packages....* gnu/packages/textutils.scm (vale): [source]: Remove more vendored modules. [native-inputs]: Add go-github-com-fatih-color, go-github-com-gobwas-glob, go-github-com-mitchellh-go-homedir, go-github-com-yuin-goldmark, go-golang-org-x-net-html, go-gopkg-in-ini-v1, and go-gopkg-in-yaml-v2. Change-Id: Ia7e87888fd286b54157382d01c8a3ca8475e3cb0 Sharlatan Hellseher
2024-04-09gnu: vale: Refresh package style....* gnu/packages/textutils.scm (vale): [source]: Remove some packaged module from vendor. [arguments]: Move above native-inputs. Swap to list style, do not install source. [description]: Fix indentation. Change-Id: I3efbffc74e76ba2c88467bfc7e79b06d4d05ee18 Sharlatan Hellseher
2024-04-09gnu: csvdiff: Adjust inputs....* gnu/packages/textutils.scm (csvdiff): Adjust inputs. [arguments]: Swap to list style, do not install sources. [native-inputs]: Swap from propagated-inputs to native-inputs. Remove indirect Golang modules: go-github-com-mattn-go-colorable, go-github-com-oneofone-xxhash, go-github-com-spaolacci-murmur3, and go-golang-org-x-sys. Change-Id: I903d8869b8c468c15a2e78a565bcaaf34594e34b Sharlatan Hellseher
2024-04-09gnu: Add miller....* gnu/packages/textutils.scm (miller): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: Ic381b5e28e561382c49f843aa1baadf2d2d6f294 Wilko Meyer
2024-04-09gnu: Add go-github-com-facette-natsort....* gnu/packages/golang-xyz.scm (go-github-com-facette-natsort): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: I23ab432b5a7f35d2f3144cfd68cfff75683eb592 Wilko Meyer
2024-04-09gnu: Add go-github-com-johnkerl-lumin....* gnu/packages/golang-xyz.scm (go-github-com-johnkerl-lumin): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Wilko Meyer
2024-04-09gnu: Add go-github-com-lestrrat-go-strftime....* gnu/packages/golang-xyz.scm (go-github-com-lestrrat-go-strftime): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: I8f4fcc42608357c409dc38e63c1b2b1d3083b268 Wilko Meyer
2024-04-09gnu: Add go-github-com-lestrrat-go-envload....* gnu/packages/golang-xyz.scm (go-github-com-lestrrat-go-envload): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: I6bdf0b026779556bf5a0a89de0c7e868f13c286d Wilko Meyer
2024-04-09gnu: diffoscope: Update to 263....* gnu/packages/diffoscope.scm (diffoscope): Update to 263. Change-Id: I8c9fce87dcf78fbc0f5ed319fa9e8b6d2e37fee1 Signed-off-by: Christopher Baines <mail@cbaines.net> Wilko Meyer
2024-04-09gnu: nyxt: Update to 3.11.6....* gnu/packages/web-browsers.scm (nyxt): Update to 3.11.6. Signed-off-by: Christopher Baines <mail@cbaines.net> Andre A. Gomes
2024-04-09gnu: tracy: Update to 0.10....* gnu/packages/profiling.scm (tracy, tracy-wayland): Update to 0.10. Change-Id: Iee2d306e97aff88575286e2da78430be8014b35c Signed-off-by: Christopher Baines <mail@cbaines.net> VÖRÖSKŐI András
2024-04-09gnu: python-deeptools: Update to 3.5.5....* gnu/packages/bioinformatics.scm (python-deeptools): Update to 3.5.5. [build-system]: Replace by pyproject-build-system. [arguments]: Add phase that fixes 'test/test_tools.py'. Change-Id: Ibb51939275c96df2c4a1e248a03d683f2f4904ac Signed-off-by: Christopher Baines <mail@cbaines.net> Simon Tournier