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2018-08-21gnu: python-paramiko: Add some missing dependencies.Leo Famulari
* gnu/packages/python-crypto.scm (python-paramiko, python2-paramiko)[propagated-inputs]: Add python-bcrypt and python-pynacl.
2018-08-21gnu: asymptote: Use minimal texlive-union.Pierre Neidhardt
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Replace texlive with texlive-union.
2018-08-21gnu: texlive-latex-base: Include support files.Pierre Neidhardt
* gnu/packages/tex.scm (texlive-latex-base)[native-inputs]: Include support files.
2018-08-21gnu: mit-scheme: Use minimal texlive-union.Pierre Neidhardt
* gnu/packages/scheme.scm (mit-scheme)[native-inputs]: Replace texlive with texlive-union.
2018-08-21gnu: sl: Don't use unstable tarball.Tobias Geerinckx-Rice
* gnu/packages/toys.scm (sl)[source]: Use GIT-FETCH and GIT-FILE-NAME.
2018-08-21gnu: python-rpy2: Update to 2.9.4.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-rpy2): Update to 2.9.4. [arguments]: Remove obsolete phases and substitute INVOKE for SYSTEM* now that we can.
2018-08-21gnu: python-rpy2: Update home page.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-rpy2)[home-page]: Update URI.
2018-08-21gnu: r-iterators: Update to 1.0.10.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.10.
2018-08-21gnu: r-foreign: Update to 0.8-71.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-71.
2018-08-20gnu: services: Fix pcscd activation bug.Chris Marusich
Fixes: <https://bugs.gnu.org/32478>. * gnu/services/security-token.scm (pcscd-activation): Idempotently create the /var/lib/pcsc symlink so that it does not fail when it already exists.
2018-08-21gnu: r-openssl: Update to 1.0.2.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-openssl): Update to 1.0.2.
2018-08-21gnu: r-modeltools: Update to 0.2-22.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-modeltools): Update to 0.2-22.
2018-08-20gnu: mysql: Update to 5.7.23.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (mysql): Update to 5.7.23.
2018-08-20gnu: mysql: Fix build.Tobias Geerinckx-Rice
MySQL demands boost@1.59.0, and lying about it no longer works: sql/item_geofunc_internal.cc: In function ‘void handle_gis_exception(const char*)’: sql/item_geofunc_internal.cc:37:81: error: expected unqualified-id before ‘&’ token catch (const boost::geometry::detail::self_get_turn_points::self_ip_exception &) ^ [...] * gnu/packages/databases.scm (boost-for-mysql): New variable. (mysql)[inputs]: Use that instead of the regular boost. [arguments]: Remove now-unnecessary ‘patch-boost-version’ phase.
2018-08-20gnu: python-pyodbc: Update to 4.0.24.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.24.
2018-08-20gnu: python-mysqlclient: Update to 1.3.13.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-mysqlclient): Update to 1.3.13.
2018-08-20gnu: perl-dbd-sqlite: Update to 1.58.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.58.
2018-08-20gnu: r-energy: Update to 1.7-5.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-energy): Update to 1.7-5.
2018-08-20gnu: r-tinytex: Update to 0.6.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-tinytex): Update to 0.6. [propagated-inputs]: Add r-xfun.
2018-08-20gnu: r-xfun: Update to 0.3.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-xfun): Update to 0.3.
2018-08-20gnu: r-jomo: Update to 2.6-3.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-jomo): Update to 2.6-3.
2018-08-20gnu: r-trend: Update to 1.1.1.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-trend): Update to 1.1.1.
2018-08-20gnu: r-lava: Update to 1.6.3.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-lava): Update to 1.6.3.
2018-08-20gnu: r-mitml: Update to 0.3-6.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-mitml): Update to 0.3-6.
2018-08-20gnu: r-vgam: Update to 1.0-6.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-vgam): Update to 1.0-6.
2018-08-20gnu: python-py: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-py)[home-page]: Use HTTPS.
2018-08-20gnu: xpad: Update to 5.1.0.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (xpad): Update to 5.1.0. [arguments]: Remove obsolete ‘run-autogen’ phase.
2018-08-20gnu: emacs-f: Update to 0.20.0.Tobias Geerinckx-Rice
* gnu/packages/emacs.scm (emacs-f): Update to 0.20.0.
2018-08-20gnu: emacs-f: Don't use unstable tarball.Tobias Geerinckx-Rice
* gnu/packages/emacs.scm (emacs-f)[source]: Use GIT-FETCH and GIT-FILE-NAME.
2018-08-20gnu: gimp: Report bugs to Guix.Tobias Geerinckx-Rice
Upstream prints this when running ./configure. Take the hint. NOTE: if you plan on packaging GIMP for distribution, it is recommended to override the bug report URL with option: --with-bug-report-url=https://example.com/ so that you can filter packaging bugs from core bugs before reporting upstream. * gnu/packages/gimp.scm (gimp)[arguments]: Customise bug report URI.
2018-08-20gnu: gimp: Update to 2.10.6.Tobias Geerinckx-Rice
* gnu/packages/gimp.scm (gimp): Update to 2.10.6.
2018-08-20gnu: gegl: Update to 0.4.8.Tobias Geerinckx-Rice
* gnu/packages/gimp.scm (gegl): Update to 0.4.8.
2018-08-20gnu: babl: Update to 0.1.56.Tobias Geerinckx-Rice
* gnu/packages/gimp.scm (babl): Update to 0.1.56.
2018-08-20gnu: guile-ssh: Update to 0.11.3.Ludovic Courtès
* gnu/packages/ssh.scm (guile-ssh): Update to 0.11.3.
2018-08-20gnu: guile-json: Update to 1.1.1.Ludovic Courtès
* gnu/packages/guile.scm (guile-json): Update to 1.1.1. [source]: Remove snippet. [native-inputs]: Add PKG-CONFIG.
2018-08-20gnu: guile-redis: Update to 1.0.0.Ludovic Courtès
* gnu/packages/guile.scm (guile-redis): Update to 1.0.0. [source]: Fetch from github.com. Remove snippet. [native-inputs]: Add AUTOCONF, AUTOMAKE, and PKG-CONFIG.
2018-08-20gnu: Update virtuoso-ose to 7.2.5.Roel Janssen
* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.5.
2018-08-20gnu: xpra: Update to 2.3.3.Rutger Helling
* gnu/packages/xorg.scm (xpra): Update to 2.3.3.
2018-08-20gnu: wine-staging: Update to 3.14.Rutger Helling
* gnu/packages/wine.scm (wine-staging): Update to 3.14.
2018-08-20gnu: wine-staging-patchset-data: Update to 3.14.Rutger Helling
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.14.
2018-08-19gnu: syncthing: Invoke build steps with INVOKE.Leo Famulari
* gnu/packages/syncthing.scm (syncthing)[arguments]: Use INVOKE.
2018-08-19gnu: libconfuse: Update to 3.2.2 [fixes CVE-2018-14447].Marius Bakke
* gnu/packages/wm.scm (libconfuse): Update to 3.2.2.
2018-08-19gnu: gcc@4.8: Fix libsanitizer build issue.Ludovic Courtès
Fixes <https://bugs.gnu.org/32397>. Reported by fis trivial <ybbs.daans@hotmail.com>. * gnu/packages/patches/gcc-4.8-libsanitizer-fix.patch: New file. * gnu/packages/gcc.scm (gcc-4.8)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2018-08-19gnu: libchop: Fix build and test errors.Ludovic Courtès
* gnu/packages/backup.scm (libchop)[arguments]: New field.
2018-08-19gnu: libchop: Require gperf 3.0.Ludovic Courtès
Fixes <https://bugs.gnu.org/32382>. Reported by Björn Höfling <bjoern.hoefling@bjoernhoefling.de>. * gnu/packages/backup.scm (libchop)[native-inputs]: Use GPERF-3.0 instead of GPERF.
2018-08-19Merge branch 'staging'Marius Bakke
2018-08-19gnu: mescc-tools: Update to 0.5.2.Jan Nieuwenhuizen
* gnu/packages/mes.scm (mescc-tools): Update to 0.5.2.
2018-08-19gnu: linux-libre: Update to 4.18.3.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.3. (%linux-libre-hash): Update hash. (%linux-libre-patches): Rename to ... (%linux-libre-4.18-patches): ... this. (linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus): Apply %linux-libre-4.18-patches.
2018-08-19gnu: linux-libre@4.14: Update to 4.14.65.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.65. (%linux-libre-4.14-hash): Update hash.
2018-08-19gnu: linux-libre@4.9: Update to 4.9.122.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.122.
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