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* gnu/packages/bioconductor.scm (r-deds): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-savr): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-destiny): Update to 2.14.0.
[propagated-inputs]: Remove r-fnn and r-hmisc; add r-ggplot2.
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* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.2.0.
[propagated-inputs]: Add r-biocgenerics and r-rcpphnsw.
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* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-inspect): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-plgem): Update to 1.56.0.
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* gnu/packages/bioconductor.scm (r-rots): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-glimma): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-goseq): Update to 1.36.0.
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* gnu/packages/bioconductor.scm (r-ctc): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.18.0.
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* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.46.0.
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* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.
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* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
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* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.
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* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.
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* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.0.
[propagated-inputs]: Replace r-batchjobs with r-batchtools; add r-yaml.
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* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.0.
[propagated-inputs]: Add r-rhtslib.
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* gnu/packages/bioinformatics.scm (r-impute): Update to 1.58.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
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* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.0.
[propagated-inputs]: Add ghc-pandoc.
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* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.10.0.
[propagated-inputs]: Add r-mgcv.
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* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.0.
[propagated-inputs]: Add r-biocfilecache, r-dplyr, and r-rappdirs.
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* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.30.0.
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* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.24.0.
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* gnu/packages/bioinformatics.scm (r-gage): Update to 2.34.0.
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* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.20.0.
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* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.0.0.
[propagated-inputs]: Add r-clue and r-png.
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* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.26.0.
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* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.8.0.
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* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.26.0.
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* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.32.0.
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