aboutsummaryrefslogtreecommitdiff
path: root/gnu
AgeCommit message (Collapse)Author
2019-04-19gnu: r-seurat: Update to 3.0.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.0.0. [propagated-inputs]: Remove r-dosnow, r-dplyr, r-dtw, r-foreach, r-fpc, r-gplots, r-hdf5r, r-hmisc, r-httr, r-lars, r-mixtools, r-reshape2, and r-tidyr; add r-future, r-future-apply, r-ggrepel, r-kernsmooth, r-rlang, r-rsvd, r-scales, and r-sctransform.
2019-04-19gnu: Add r-sctransform.Ricardo Wurmus
* gnu/packages/cran.scm (r-sctransform): New variable.
2019-04-19gnu: r-urltools: Update to 1.7.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-urltools): Update to 1.7.3.
2019-04-19gnu: r-rdpack: Update to 0.11-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rdpack): Update to 0.11-0.
2019-04-19gnu: r-sdmtools: Update to 1.1-221.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-sdmtools): Update to 1.1-221.1.
2019-04-19gnu: r-hardyweinberg: Update to 1.6.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.2.
2019-04-19gnu: r-clipr: Update to 0.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-clipr): Update to 0.6.0.
2019-04-19gnu: r-caret: Update to 6.0-83.Ricardo Wurmus
* gnu/packages/statistics.scm (r-caret): Update to 6.0-83.
2019-04-19gnu: klick: Fix build with latest scons.Ricardo Wurmus
* gnu/packages/music.scm (klick)[arguments]: Patch "SConstruct" file to make it compatible with the current version of scons.
2019-04-19gnu: perl-datetime-timezone: Fix missing timezone data.Christopher Baines
I noticed this when using Sqitch, on systems without /usr/share/zoneinfo, actions like deploy fail. * gnu/packages/perl.scm (perl-datetime-timezone)[arguments]: Add 'patch-tzdata phase to replace /usr/share/zoneinfo with a reference to the tzdata package. [inputs]: Add the tzdata package.
2019-04-19gnu: python2-send2trash: Don't inherit properties from python-send2trash.Marius Bakke
This is a follow-up to commit 20b3fde7763a14f605ac8a0aba1abfa73a6e7dda. Commits and beer do not mix well. * gnu/packages/python-xyz.scm (python2-send2trash): Inherit using STRIP-PYTHON2-VARIANT.
2019-04-19gnu: python-send2trash: Really delay Python2 variant.Marius Bakke
This is a follow-up to commit 4782a06f45d515eebc4d1ee8e958def409a0ef9f, which somehow solved my problem, but did so incorrectly. * gnu/packages/python-xyz.scm (python-send2trash)[properties]: Refer to PYTHON2-SEND2TRASH.
2019-04-19gnu: gpgme: Update to 1.13.0.Marius Bakke
* gnu/packages/gnupg.scm (gpgme): Update to 1.13.0. [source](patches): Remove.
2019-04-19gnu: python-send2trash: Properly delay python2 variant.Marius Bakke
* gnu/packages/python-xyz.scm (python2-send2trash)[properties]: Move from here ... (python-send2trash)[properties]: ... to here.
2019-04-19gnu: python-service-identity: Update to 18.1.0.Marius Bakke
* gnu/packages/python-crypto.scm (python-service-identity): Update to 18.1.0.
2019-04-19gnu: python-jsonschema: Update to 3.0.1.Marius Bakke
* gnu/packages/python-xyz.scm (python-jsonschema): Update to 3.0.1. [arguments]: Adjust check phase for Twisted instead of nosetests. [native-inputs]: Remove PYTHON-NOSE and PYTHON-VCVERSIONER. Add PYTHON-SETUPTOOLS-SCM and PYTHON-TWISTED. [propagated-inputs]: Add PYTHON-ATTRS, PYTHON-PYRSISTENT and PYTHON-SIX. (python2-jsonschema)[native-inputs, propagated-inputs]: Inherit.
2019-04-19gnu: Add python-pyrsistent.Marius Bakke
* gnu/packages/python-xyz.scm (python-pyrsistent, python2-pyrsistent): New public variables.
2019-04-19gnu: python-twisted: Update to 19.2.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-twisted): Update to 19.2.0. [propagated-inputs]: Add PYTHON-PYHAMCREST.
2019-04-19gnu: python-automat: Update to 0.7.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-automat): Update to 0.7.0.
2019-04-19gnu: python-m2r: Update to 0.2.1.Marius Bakke
* gnu/packages/python-xyz.scm (python-m2r): Update to 0.2.1.
2019-04-19gnu: python-idna: Update to 2.8.Marius Bakke
* gnu/packages/python-xyz.scm (python-idna): Update to 2.8.
2019-04-19gnu: python-hyperlink: Update to 19.0.0.Marius Bakke
* gnu/packages/python-web.scm (python-hyperlink): Update to 19.0.0.
2019-04-19gnu: python-zope-interface: Update to 4.6.0.Marius Bakke
* gnu/packages/python-web.scm (python-zope-interface): Update to 4.6.0.
2019-04-19gnu: xmlsec: Update to 1.2.28.Marius Bakke
* gnu/packages/xml.scm (xmlsec): Update to 1.2.28.
2019-04-18gnu: gnuastro: Update to 0.9.Efraim Flashner
* gnu/packages/astronomy.scm (gnuastro): Update to 0.9. [native-inputs]: Add libtool.
2019-04-18gnu: nano: Update to 4.1.Efraim Flashner
* gnu/packages/nano.scm (nano): Update to 4.1.
2019-04-18gnu: xpra: Update to 2.5.1.Rutger Helling
* gnu/packages/xorg.scm (xpra): Update to 2.5.1.
2019-04-17gnu: rclone: Update to 1.47.0.Tobias Geerinckx-Rice
* gnu/packages/sync.scm (rclone): Update to 1.47.0.
2019-04-17gnu: console-setup: Update to 1.191.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (console-setup): Update to 1.191.
2019-04-17installer: Sort keyboard layouts according to language and translations.Ludovic Courtès
Previously, we would always (1) put English first, and (2) sort the other layouts based on their English description. This fixes both issues. * gnu/installer/newt/keymap.scm (sort-layouts)[layout<?]: New procedure. [preferred]: New variable. Partition according to both the 'name' and 'synopsis' fields. Sort both the main layouts and the other layouts according to 'layout<?'.
2019-04-17installer: Parse the 'shortDescription' field from xkeyboard-config.Ludovic Courtès
* gnu/installer/keymap.scm (<x11-keymap-layout>)[synopsis]: New field. (xkb-rules->models+layouts): Fill out the 'synopsis' field.
2019-04-17installer: Translate keyboard layout names.Ludovic Courtès
* gnu/installer.scm (installer-program)[installer-builder]: Call 'bindtextdomain' for "xkeyboard-config". * gnu/installer/newt/keymap.scm (run-keymap-page): Add calls to 'gettext'.
2019-04-17installer: Sort items with 'string-locale<?'.Ludovic Courtès
That way "Österreich" comes before "Schweiz" in a German locale (or pretty much any sane locale.) * gnu/installer/newt/page.scm (run-listbox-selection-page)[sort-listbox-items]: Use 'string-locale<?' instead of 'string<=?'.
2019-04-17installer: Look up timezone name translations in "iso_3166-1".Ludovic Courtès
* gnu/installer/newt/timezone.scm (run-timezone-page): Add call to 'gettext' for timezone names.
2019-04-17installer: Display language and territory names natively.Ludovic Courtès
* gnu/installer.scm (installer-program): Add calls to 'bindtextdomain'. * gnu/installer/newt/locale.scm (run-locale-page) <language, territory>: Add calls to 'gettext'.
2019-04-17installer: Change language as soon as it has been chosen.Ludovic Courtès
Previously we'd call 'setlocale' only after the complete 'locale' step had finished. * gnu/installer/newt/locale.scm (run-language-page): Set the 'LANGUAGE' environment variable before returning.
2019-04-17gnu: guix: Update to b8b1e4d.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to b8b1e4d.
2019-04-17installer: Desktop environment page now includes window managers.Ludovic Courtès
* gnu/installer/services.scm (<system-service>)[snippet]: Change to be a list of sexps and add default value. [packages]: New field. (%system-services): Adjust 'snippet' fields to be lists of sexps. Add Openbox, awesome, i3, and ratpoison. (system-services->configuration): Adjust 'snippet' handling. Honor 'packages' field.
2019-04-17gnu: guix: Don't pass '--with-libgcrypt-prefix'.Ludovic Courtès
* gnu/packages/package-management.scm (guix)[arguments]: Remove "--with-libgcrypt-prefix" from the configure flags.
2019-04-17gnu: awesome: Update home page.Ludovic Courtès
* gnu/packages/wm.scm (awesome)[home-page]: Update.
2019-04-17services: fprintd: Fix service.Danny Milosavljevic
* gnu/services/authentication.scm (<fprintd-configuration>)[ntp]: Rename to... [fprintd]: ...this. (fprintd-dbus-service): New procedure. (fprintd-service-type): Use it. [default-value]: Add value.
2019-04-17gnu: gtkwave: Update to 3.3.100.Tobias Geerinckx-Rice
* gnu/packages/fpga.scm (gtkwave): Update to 3.3.100.
2019-04-17gnu: qsynth: Update to 0.5.6.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (qsynth): Update to 0.5.6.
2019-04-17gnu: qjackctl: Update to 0.5.7.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (qjackctl): Update to 0.5.7.
2019-04-17gnu: csound: Update to 6.12.2.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (csound): Update to 6.12.2.
2019-04-17gnu: gtkwave: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/fpga.scm (gtkwave)[source]: Hard-code NAME.
2019-04-17gnu: calf: Update to 0.90.2.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (calf): Update to 0.90.2.
2019-04-17gnu: the-legend-of-edgar: Update to 1.31.Tobias Geerinckx-Rice
* gnu/packages/games.scm (the-legend-of-edgar): Update to 1.31. [inputs]: Use SDL 2 union. [arguments]: Adjust accordingly.
2019-04-17gnu: dungeon-crawl-stone-soup: Update to 0.23.2.Tobias Geerinckx-Rice
* gnu/packages/games.scm (dungeon-crawl-stone-soup): Update to 0.23.2.
2019-04-17gnu: minetest: Update to 5.0.1.Tobias Geerinckx-Rice
* gnu/packages/games.scm (minetest): Update to 5.0.1. games minetest
generated by cgit