aboutsummaryrefslogtreecommitdiff
path: root/gnu/packages
AgeCommit message (Collapse)Author
2016-01-08gnu: i2c-tools: Update source and home-page URLs.Leo Famulari
* gnu/packages/linux.scm (i2c-tools)[source]: Update URL. [home-page]: Update URL.
2016-01-08gnu: lm-sensors: Update source and home-page URLs.Leo Famulari
* gnu/packages/linux.scm (lm-sensors)[source]: Update URL. [home-page]: Update URL.
2016-01-08gnu: nss: Update to 3.21 [fixes CVE-2015-7575].Mark H Weaver
* gnu/packages/gnuzilla.scm (nss): Update to 3.21. [arguments]: In configure phase, setenv CC=gcc. * gnu/packages/patches/nss-pkgconfig.patch: Adapt to NSS 3.21.
2016-01-08gnu: Add missing (gnu packages gcc) import.Mathieu Lirzin
* gnu/packages/bioinformatics.scm: Use (gnu packages gcc). This is required by 'r-impute' for 'gfortran'.
2016-01-08gnu: xterm: Update to 322.Mathieu Lirzin
* gnu/packages/xorg.scm (xterm): Update to 322.
2016-01-08gnu: epiphany: Update to 3.18.2.宋文武
* gnu/packages/gnome.scm (epiphany): Update to 3.18.2.
2016-01-08gnu: webkitgtk: Update to 2.10.4.宋文武
* gnu/packages/webkit.scm (webkitgtk): Update to 2.10.4.
2016-01-07gnu: Add Pfff.Pjotr Prins
* gnu/packages/textutils.scm (pfff): New variable.
2016-01-07gnu: mpv: Remove 'samba' input.Alex Kost
This is a heavy-weight and uncommon feature. See <http://lists.gnu.org/archive/html/guix-devel/2015-12/msg00701.html>. * gnu/packages/video.scm (mpv)[inputs]: Remove 'samba'.
2016-01-07gnu: Add genomation.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomation): New variable.
2016-01-07gnu: Add seqPattern.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seqpattern): New variable.
2016-01-07gnu: Add impute.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-impute): New variable.
2016-01-07gnu: Add BSgenome.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome): New variable.
2016-01-07gnu: Add plotly.Ricardo Wurmus
* gnu/packages/statistics.scm (r-plotly): New variable.
2016-01-07gnu: Add viridis.Ricardo Wurmus
* gnu/packages/statistics.scm (r-viridis): New variable.
2016-01-07gnu: Add topGO.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-topgo): New variable.
2016-01-07gnu: Add matrixStats.Ricardo Wurmus
* gnu/packages/statistics.scm (r-matrixstats): New variable.
2016-01-07gnu: Add R.rsp.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-rsp): New variable.
2016-01-07gnu: Add R.cache.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-cache): New variable.
2016-01-07gnu: Add R.utils.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-utils): New variable.
2016-01-07gnu: Add R.oo.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-oo): New variable.
2016-01-07gnu: Add R.methodsS3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-methodss3): New variable.
2016-01-07gnu: Add base64enc.Ricardo Wurmus
* gnu/packages/statistics.scm (r-base64enc): New variable.
2016-01-07gnu: Add DT.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dt): New variable.
2016-01-07gnu: Add SparseM.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sparsem): New variable.
2016-01-07gnu: Add GO.db.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-go-db): New variable.
2016-01-07gnu: Add GenomicFeatures.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfeatures): New variable.
2016-01-07gnu: Add rtracklayer.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rtracklayer): New variable.
2016-01-07gnu: Add GenomicAlignments.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicalignments): New variable.
2016-01-07gnu: Add SummarizedExperiment.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): New variable.
2016-01-07gnu: Add Rsamtools.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rsamtools): New variable.
2016-01-07gnu: Add Biostrings.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biostrings): New variable.
2016-01-07gnu: Add BiocParallel.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocparallel): New variable.
2016-01-07gnu: Add biomaRt.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biomart): New variable.
2016-01-07gnu: Add AnnotationDbi.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationdbi): New variable.
2016-01-07gnu: Add Biobase.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biobase): New variable.
2016-01-07gnu: Add snow.Ricardo Wurmus
* gnu/packages/statistics.scm (r-snow): New variable.
2016-01-07gnu: Add futile.logger.Ricardo Wurmus
* gnu/packages/statistics.scm (r-futile-logger): New variable.
2016-01-07gnu: Add futile.options.Ricardo Wurmus
* gnu/packages/statistics.scm (r-futile-options): New variable.
2016-01-07gnu: Add lambda.r.Ricardo Wurmus
* gnu/packages/statistics.scm (r-lambda-r): New variable.
2016-01-07gnu: Add r-xml.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xml): New variable.
2016-01-07gnu: Add RCurl.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcurl): New variable.
2016-01-07gnu: Add RSQLite.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rsqlite): New variable.
2016-01-07gnu: Add xmlstarlet.Raimon Grau
* gnu/packages/xml.scm (xmlstarlet): New variable.
2016-01-07gnu: zita-convolver: Drop the '-march=native' optimization.宋文武
* gnu/packages/audio.scm (zita-convolver)[source]: Add snippet.
2016-01-07gnu: zita-resampler: Drop the '-march=native' optimization.宋文武
* gnu/packages/audio.scm (zita-resampler)[source]: Add snippet.
2016-01-07gnu: Add ruby-ansi.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-ansi): New variable.
2016-01-07gnu: edirect: Update to 3.50.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (edirect): Update to 3.50. [native-inputs]: Remove "unzip".
2016-01-07gnu: w3m: Enable SSL, disable broken protocols and ciphers.Leo Famulari
Fixes <http://bugs.gnu.org/16791>. * gnu/packages/patches/w3m-force-ssl_verify_server-on.patch: New file. * gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch: New file. * gnu/packages/patches/w3m-disable-weak-ciphers.patch: New file. * gnu/packages/w3m.scm (w3m)[source]: Add patches. * gnu-system.am (dist_patch_DATA): Add the new files.
2016-01-07gnu: w3m: Update patch to use '-p1'.Leo Famulari
* gnu/packages/patches/w3m-fix-compile.patch: Rename this file... * gnu/packages/patches/w3m-libgc.patch: ...to this, and adjust patch prefix level to '-p1'. * gnu-system.am (dist_patch_DATA): Update patch name. * gnu/packages/w3m.scm (w3m)[source]: Update patch name. [source]: Drop patch flag -p0.
generated by cgit