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2021-05-26gnu: minimap2: Update to 2.18....* gnu/packages/bioinformatics.scm (minimap2): Update to 2.18. [source]: Remove patch. * gnu/packages/patches/minimap2-aarch64-support.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner
2021-05-26gnu: Add r-bayesfactor....* gnu/packages/statistics.scm (r-bayesfactor): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-effects....* gnu/packages/statistics.scm (r-effects): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-logspline....* gnu/packages/statistics.scm (r-logspline): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-kknn....* gnu/packages/statistics.scm (r-kknn): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-hypergeo....* gnu/packages/cran.scm (r-hypergeo): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-elliptic....* gnu/packages/cran.scm (r-elliptic): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-contfrac....* gnu/packages/cran.scm (r-contfrac): New variable. Lars-Dominik Braun
2021-05-26gnu: Add r-decipher....* gnu/packages/bioconductor.scm (r-decipher): New variable. Roel Janssen
2021-05-26gnu: Add r-deepsnv....* gnu/packages/bioconductor.scm (r-deepsnv): New variable. Roel Janssen
2021-05-26gnu: Add r-geneoverlap....* gnu/packages/bioconductor.scm (r-geneoverlap): New variable. Roel Janssen
2021-05-26gnu: cuirass: Update to 1.0.0-20.524b81d....* gnu/packages/ci.scm (cuirass): Update to 1.0.0-20.524b81d. Mathieu Othacehe
2021-05-26gnu: Add minimodem....* gnu/packages/radio.scm (minimodem): New variable. Guillaume Le Vaillant
2021-05-26gnu: Add r-chipseeker....* gnu/packages/bioconductor.scm (r-chipseeker): New variable. Roel Janssen
2021-05-26gnu: Add r-model4you....* gnu/packages/cran.scm (r-model4you): New variable. Roel Janssen
2021-05-26gnu: Add r-pvclust....* gnu/packages/cran.scm (r-pvclust): New variable. Roel Janssen
2021-05-26gnu: Add r-bsgenome-btaurus-ucsc-bostau8....* gnu/packages/bioconductor.scm (r-bsgenome-btaurus-ucsc-bostau8): New variable. Roel Janssen
2021-05-26gnu: Add r-phantompeakqualtools....* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): New variable. Roel Janssen
2021-05-26gnu: Add r-spp....* gnu/packages/bioinformatics.scm (r-spp): New variable. Roel Janssen
2021-05-26gnu: Add r-aneufinder....* gnu/packages/bioconductor.scm (r-aneufinder): New variable. Roel Janssen
2021-05-26gnu: Add r-aneufinderdata....* gnu/packages/bioconductor.scm (r-aneufinderdata): New variable. Roel Janssen
2021-05-25gnu: Add rsync 3.2.3....* gnu/packages/rsync.scm (rsync-next): New variable. Leo Famulari
2021-05-25gnu: nginx: Update to 1.21.0 [fixes CVE-2021-23017]....* gnu/packages/web.scm (nginx, nginx-documentation): Update to 1.21.0. Leo Famulari
2021-05-25gnu: qhull: Build position independent....* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to build code position independent. Efraim Flashner
2021-05-25gnu: cuirass: Update to 1.0.0-19.e1382f0....* gnu/packages/ci.scm (cuirass): Update to 1.0.0-19.e1382f0. Mathieu Othacehe
2021-05-25gnu: qhull: Link binaries to shared library....This drops the package size by nearly 60%. * gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to link binaries to shared library. Efraim Flashner
2021-05-25gnu: Add perl-set-intervaltree....* gnu/packages/perl.scm (perl-set-intervaltree): New variable. Roel Janssen
2021-05-25gnu: Add perl-log-message-simple...* gnu/packages/perl.scm (perl-log-message-simple): New variable. Roel Janssen
2021-05-25gnu: Add perl-log-message....* gnu/packages/perl.scm (perl-log-message): New variable. Roel Janssen
2021-05-25gnu: Add perl-extutils-manifest....* gnu/packages/perl.scm (perl-extutils-manifest): New variable. Roel Janssen
2021-05-25gnu: Add perl-data-uuid....* gnu/packages/perl.scm (perl-data-uuid): New variable. Roel Janssen
2021-05-25gnu: cuirass: Update to 1.0.0-18.b1abb44....* gnu/packages/ci.scm (cuirass): Update to 1.0.0-18.b1abb44. Mathieu Othacehe
2021-05-25gnu: Add perl-const-fast....* gnu/packages/perl.scm (perl-const-fast): New variable. Roel Janssen
2021-05-25gnu: emacs-shell-command+: Update to 2.2.0....* gnu/packages/emacs-xyz.scm (emacs-shell-command+): Update to 2.2.0. Nicolas Goaziou
2021-05-25gnu: Add kanatest....* gnu/packages/education.scm (kanatest): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> nixo
2021-05-25gnu: emacs-vertico: Update to 0.11....* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.11. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Xinglu Chen
2021-05-25gnu: openttd-engine: Update to 1.11.2....* gnu/packages/games.scm (openttd-engine): Update to 1.11.2. [build-system]: Switch to CMake. [arguments]: Enable tests. (openttd)[arguments]<#:configure-flags>: Use CMake flags. <#:phases>: Remove `configure'. Copy assets file before check step to enable tests. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Solene Rapenne via Guix-patches via
2021-05-25gnu: emacs-xyz.scm: Add missing copyright line.Nicolas Goaziou
2021-05-25gnu: Add emacs-geiser-racket....* gnu/packages/emacs-xyz.scm (emacs-geiser-racket): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> David Dashyan
2021-05-25gnu: lagrange: Update to 1.4.2....* gnu/packages/web-browsers.scm (lagrange): Update to 1.4.2. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Solene Rapenne via Guix-patches via
2021-05-25gnu: Remove unnecessary patches for emacs-geiser....* gnu/packages/patches/emacs-geiser-autoload-activate-implementation.patch: * gnu/packages/patches/emacs-geiser-guile-auto-activate.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Apply file removal. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Alexandr Vityazev
2021-05-25gnu: emacs-geiser-guile: Update to 0.17....* gnu/packages/emacs-xyz (emacs-geiser-guile): Update to 0.17. [patches]: Remove. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Alexandr Vityazev
2021-05-25gnu: emasc-geiser: Update to 0.16....* gnu/packages/emacs-xyz (emacs-geiser): Update to 0.16. [patches]: Remove. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Alexandr Vityazev
2021-05-25gnu: Add cl-djula....* gnu/packages/lisp-xyz.scm: (sbcl-djula, ecl-djula, cl-djula): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-05-25gnu: Add cl-slice....* gnu/packages/lisp-xyz.scm (sbcl-cl-slice, ecl-cl-slice, cl-slice): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-05-25gnu: Add cl-locale....* gnu/packages/lisp-xyz.scm (sbcl-cl-locale, ecl-cl-locale, cl-locale): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-05-25gnu: Add cl-parser-combinators....* gnu/packages/lisp-xyz.scm (sbcl-parser-combinators, ecl-parser-combinators, cl-parser-combinators): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-05-25gnu: Add cl-gettext....* gnu/packages/lisp-xyz.scm (sbcl-gettext, ecl-gettext, cl-gettext): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-05-25gnu: Add cl-arnesi....* gnu/packages/lisp-xyz.scm (sbcl-arnesi, ecl-arnesi, cl-arnesi): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-05-25gnu: infamous-plugins: Update to 0.3.0....* gnu/packages/audio.scm (infamous-plugins): Update to 0.3.0. Efraim Flashner