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2021-03-05gnu: Add r-rcppthread.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-rcppthread): New variable.
2021-03-05gnu: camlboot: Raise max-silent-time timeout value to 4 hours.Julien Lepiller
* gnu/packages/ocaml.scm (camlboot)[properties]: Add a 'max-silent-time' property, with a value of 4 hours.
2021-03-05gnu: Add r-cellchat.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-cellchat): New variable.
2021-03-05gnu: Add r-gg-gap.Ricardo Wurmus
* gnu/packages/cran.scm (r-gg-gap): New variable.
2021-03-05gnu: virtualpg: Update to 2.0.1.Felix Gruber
* gnu/packages/geo.scm (virtualpg): Update to 2.0.1. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-05gnu: racket: Update to 8.0.Philip McGrath
* gnu/packages/scheme.scm (racket): Update to 8.0. [arguments]: Add #:configure-flags. Add 'patch-chez-configure' phase. [inputs]: Add "zlib", "zlib:static", "lz4", and "lz4:static". [synopsis, description]: Tweak. (racket-minimal): Update to 8.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-03-05gnu: hamlib: Update to 4.1.Guillaume Le Vaillant
* gnu/packages/radio.scm (hamlib): Update to 4.1.
2021-03-04gnu: mupdf: Fix CVE-2021-3407.Kei Kebreau
* gnu/packages/pdf.scm (mupdf)[source]: Add patch. * gnu/packages/patches/mupdf-CVE-2021-3407.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2021-03-04gnu: linux-libre 4.19: Update to 4.19.178.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.178. (linux-libre-4.19-pristine-source): Update hash.
2021-03-04gnu: linux-libre 5.4: Update to 5.4.102.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.102. (linux-libre-5.4-pristine-source): Update hash.
2021-03-04gnu: linux-libre 5.10: Update to 5.10.20.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.20. (linux-libre-5.10-pristine-source): Update hash.
2021-03-04gnu: linux-libre: Update to 5.11.3.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.3. (linux-libre-5.11-pristine-source, deblob-scripts-5.11): Update hashes.
2021-03-04gnu: ruby-minitest: Update to 5.12.2.Efraim Flashner
* gnu/packages/ruby.scm (ruby-minitest): Update to 5.12.2.
2021-03-04gnu: ruby-builder: Update to 3.2.4.Efraim Flashner
* gnu/packages/ruby.scm (ruby-builder): Update to 3.2.4.
2021-03-04gnu: ripgrep: Fix build.Nicolas Goaziou
* gnu/packages/rust-apps.scm (ripgrep)[arguments]: Disable tests for now. Some are failing due to recent rust-bstr upgrade.
2021-03-04gnu: mariadb-connector-c: Fix source tarball file name.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (mariadb-connector-c)[source]: Add a FILE-NAME.
2021-03-04gnu: mariadb-connector-c: Update to 3.1.12.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (mariadb-connector-c): Update to 3.1.12.
2021-03-04gnu: pigz: Update to 2.6.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (pigz): Update to 2.6.
2021-03-04gnu: clzip: Update to 1.12.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (clzip): Update to 1.12.
2021-03-04gnu: simde: Update to 0.7.2.Tobias Geerinckx-Rice
* gnu/packages/assembly.scm (simde): Update to 0.7.2.
2021-03-04gnu: fasm: Update to 1.73.27.Tobias Geerinckx-Rice
* gnu/packages/assembly.scm (fasm): Update to 1.73.27.
2021-03-04gnu: libolm: Update to 3.2.2.Tobias Geerinckx-Rice
* gnu/packages/crypto.scm (libolm): Update to 3.2.2.
2021-03-04gnu: indi: Update to 1.8.9.Tobias Geerinckx-Rice
* gnu/packages/astronomy.scm (indi): Update to 1.8.9.
2021-03-04gnu: oath-toolkit: Update to 2.6.6.Tobias Geerinckx-Rice
* gnu/packages/authentication.scm (oath-toolkit): Update to 2.6.6.
2021-03-04gnu: libisofs: Update to 1.5.4.Tobias Geerinckx-Rice
* gnu/packages/cdrom.scm (libisofs): Update to 1.5.4.
2021-03-04gnu: python-jedi: Allow test phase to be skipped.Efraim Flashner
* gnu/packages/python-xyz.scm (python-jedi)[arguments]: Wrap custom 'check phase tests with check for tests? keyword.
2021-03-04gnu: dovecot-pigeonhole: Update to 0.5.14.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot-pigeonhole): Update to 0.5.14.
2021-03-04gnu: dovecot: Update to 2.3.14.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot): Update to 2.3.14.
2021-03-04gnu: python-plotly: Allow test phase to be skipped.Efraim Flashner
* gnu/packages/graph.scm (python-plotly)[arguments]: Wrap custom 'check phase tests with test with tests? keyword.
2021-03-04gnu: python-plotly: Update to 4.14.3.Efraim Flashner
* gnu/packages/graph.scm (python-plotly): Update to 4.14.3. [propagated-inputs]: Remove python-decorator. Add python-ipython, python-pillow. Move python-ipywidgets, python-xarray ... [native-inputs]: ... to here.
2021-03-04gnu: Add tinmop.cage
* gnu/packages/web-browsers.scm (tinmop): New variable. Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: sbcl-esrap: Update to 0.18-1.da6b24f.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-esrap): Update to 0.18-1.da6b24f. [source, home-page]: Update to new maintainer's URL. [native-inputs]: Remove eos, add fiveam. [description]: Add new features.
2021-03-04gnu: Add cl-percent-encoding.cage
* gnu/packages/lisp-xyz.scm (cl-percent-encoding, ecl-percent-encoding, sbcl-percent-encoding): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-html5-parser.cage
* gnu/packages/lisp-xyz.scm (cl-html5-parser, ecl-cl-html5-parser, sbcl-cl-html5-parser): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-crypto-shortcuts.cage
* gnu/packages/lisp-xyz.scm (cl-crypto-shortcuts, ecl-crypto-shortcuts, sbcl-crypto-shortcuts): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-i18n.cage
* gnu/packages/lisp-xyz.scm (cl-i18n, ecl-cl-i18n, sbcl-cl-i18n): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-sxql-composer.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (cl-sxql-composer, ecl-sxql-composer, sbcl-sxql-composer): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-access.cage
* gnu/packages/lisp-xyz.scm (cl-access, ecl-access, sbcl-access): New variables. Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-spark.cage
* gnu/packages/lisp-xyz.scm (cl-spark, ecl-cl-spark, sbcl-cl-spark): New variables. Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: Add cl-croatoan.cage
* gnu/packages/lisp-xyz.scm (cl-croatoan, ecl-croatoan, sbcl-croatoan): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-03-04gnu: 389-ds-base: Update to 1.4.0.31 [security fixes].Léo Le Bouter
* gnu/packages/openldap.scm (389-ds-base): Update to 1.4.0.31.
2021-03-04gnu: screen-message: Update to 0.26.Tobias Geerinckx-Rice
* gnu/packages/xdisorg.scm (screen-message): Update to 0.26.
2021-03-04gnu: xonsh: Update to 0.9.26.Tobias Geerinckx-Rice
* gnu/packages/shells.scm (xonsh): Update to 0.9.26.
2021-03-04gnu: squid: Update to 4.14.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (squid): Update to 4.14.
2021-03-04gnu: highlight: Update to 3.62.Tobias Geerinckx-Rice
* gnu/packages/pretty-print.scm (highlight): Update to 3.62.
2021-03-04gnu: wofi: Update to 1.2.4.Tobias Geerinckx-Rice
* gnu/packages/xdisorg.scm (wofi): Update to 1.2.4.
2021-03-04gnu: socat: Update to 1.7.4.1.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (socat): Update to 1.7.4.1.
2021-03-04gnu: zyre: Update to 2.0.1.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (zyre): Update to 2.0.1.
2021-03-04gnu: czmq: Update to 4.2.1.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (czmq): Update to 4.2.1.
2021-03-04gnu: meld: Update to 3.20.3.Tobias Geerinckx-Rice
* gnu/packages/patchutils.scm (meld): Update to 3.20.3.
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