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2019-04-25gnu: ocaml@4.02: Remove the package, affected by a CVE, and its dependentJulien Lepiller
packages. This fixes <https://bugs.gnu.org/27462>. * gnu/packages/ocaml.scm (ocaml-4.02, camlp4-4.02, ocaml4.02-menhir) (ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit) (ocaml4.02-camlzip, ocaml4.02-ocamlmod, ocaml4.02-zarith) (ocaml4.02-qcheck, ocaml4.02-qtest, ocaml4.02-stringext) (ocaml4.02-bisect, ocaml4.02-bitstring, ocaml4.02-result) (ocaml4.02-topkg, ocaml4.02-rresult, ocaml4.02-sqlite3, ocaml4.02-csv) (ocaml4.02-mtime, ocaml4.02-cmdliner, ocaml4.02-fmt, ocaml4.02-astring) (ocaml4.02-alcotest, ocaml4.02-ppx-tools, ocaml4.02-react, ocaml4.02-ssl) (ocaml4.02-lwt, ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath) (ocaml4.02-bos, ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar) (ocaml4.02-uutf, ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64) (ocaml4.02-omake, ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis) (ocaml4.02-js-build-tools, ocaml4.02-bin-prot, ocaml4.02-fieldslib) (ocaml4.02-ppx-core, ocaml4.02-ppx-optcomp, ocaml4.02-ppx-driver) (ocaml4.02-cppo, ocaml4.02-ppx-deriving, ocaml4.02-ppx-type-conv) (ocaml4.02-ppx-inline-test, ocaml4.02-ppx-bench, ocaml4.02-ppx-compare) (ocaml4.02-sexplib, ocaml4.02-typerep, ocaml4.02-variantslib) (ocaml4.02-ppx-sexp-conv, ocaml4.02-ppx-variants-conv) (ocaml4.02-ppx-here, ocaml4.02-ppx-assert, ocaml4.02-ppx-enumerate) (ocaml4.02-ppx-let, ocaml4.02-ppx-typerep-conv, ocaml4.02-ppx-sexp-value) (ocaml4.02-ppx-pipebang, ocaml4.02-ppx-bin-prot, ocaml4.02-ppx-fail) (ocaml4.02-ppx-custom-printf, ocaml4.02-ppx-sexp-message) (ocaml4.02-ppx-fields-conv, ocaml4.02-seq, ocaml4.02-re) (ocaml4.02-ppx-expect, ocaml4.02-ppx-jane, ocaml4.02-core-kernel) (ocaml4.02-async-kernel, ocaml4.02-async-rpc-kernel, ocaml4.02-core) (ocaml4.02-async-unix, ocaml4.02-async-extra, ocaml4.02-async) (ocaml4.02-ocplib-endian, ocaml4.02-easy-format, optcomp) (ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi) (ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): Remove variables. * guix/build-system/ocaml.scm (default-ocaml4.02) (default-ocaml4.02-findlib, package-with-ocaml4.02) (strip-ocaml4.02-variant): Remove variables.
2019-04-25gnu: ocamlify: Downgrade to 0.0.1.Julien Lepiller
Version 0.0.2 cannot be built with the latest OCaml, whereas this version does. This is also the version used by opam. * gnu/packages/ocaml.scm (ocamlify): Downgrade to 0.0.1. [arguments]: Do not use ocaml-4.02.
2019-04-25gnu: Remove ocaml-jbuilder.Julien Lepiller
Jbuilder is deprecated and replaced by dune. * gnu/packages/ocaml.scm (ocaml-jbuilder): Remove variable. (ocaml-zed, ocaml-utop): Use dune-build-system.
2019-04-25gnu: bap: Update to 1.6.0.Julien Lepiller
* gnu/packages/ocaml.scm (bap): Update to 1.6.0. (ocaml-frontc): Update to 3.4.1. (ocaml-fileutils, ocaml-cstruct, ocaml-hex, ocaml-ezjsonm, ocaml-uri): New variables. (ocaml4.02-fileutils, ocaml4.02-cstruct, ocaml4.02-hex, ocaml4.02-ezjsonm, ocaml4.02-uri): Remove variables.
2019-04-25gnu: Add ocaml-bigarray-compat.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml-bigarray-compat): New variable.
2019-04-25gnu: fltk: Update to 1.3.5.Nicolas Goaziou
* gnu/packages/fltk.scm (fltk): Update to 1.3.5.
2019-04-24gnu: Add python-yubikey-manager and python2-yubikey-manager.Chris Marusich
* gnu/packages/security-token.scm (python-yubikey-manager) (python2-yubikey-manager): New variables.
2019-04-24gnu: Add python-fido2 and python2-fido2.Chris Marusich
* gnu/packages/security-token.scm (python-fido2, python2-fido2): New variables.
2019-04-24gnu: Add public-suffix-list.Chris Marusich
* gnu/packages/dns.scm (public-suffix-list): New variable.
2019-04-24gnu: Add libu2f-host.Chris Marusich
* gnu/packages/security-token.scm (libu2f-host): New variable.
2019-04-24gnu: Add python-pyscard and python2-pyscard.Chris Marusich
* gnu/packages/security-token.scm (python-pyscard, python2-pyscard): New variables.
2019-04-24gnu: Add python-pyfakefs and python2-pyfakefs.Chris Marusich
* gnu/packages/patches/python-pyfakefs-remove-bad-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add the patch. * gnu/packages/check.scm (python-pyfakefs, python2-pyfakefs): New variables.
2019-04-25gnu: bind: Update to 9.12.4-P1 [fixes CVE-2018-5743, CVE-2019-6467].Tobias Geerinckx-Rice
* gnu/packages/dns.scm (isc-bind): Update to 9.12.4-P1. [source]: Add patch. [inputs]: Add python and python-ply. * packages/patches/bind-fix-unused-pk11-ecc-constants.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2019-04-25gnu: r-yamss: Fix typo in description.Tobias Geerinckx-Rice
* gnu/packages/bioconductor.scm (r-yamss)[description]: Fix typo.
2019-04-25gnu: python-dill: Fix typo in description.Tobias Geerinckx-Rice
* gnu/packages/python-xyz.scm (python-dill)[description]: Fix typo.
2019-04-25gnu, guix: Yearly ritual purging of the filesystems.Tobias Geerinckx-Rice
* gnu/packages/android.scm (android-ext4-utils)[synopsis]: Fix ‘file system’ spelling. * gnu/packages/disk.scm (rmlint)[synopsis, description]: Likewise. * gnu/packages/golang.scm (go-github-com-kr-fs)[synopsis, description]: Likewise & edit for grammar. * gnu/packages/ipfs.scm (gx, go-ipfs)[description]: Likewise. * /gnu/packages/java.scm (java-commons-vfs)[synopsis]: Likewise. * gnu/packages/linux.scm (fuseiso)[description]: Likewise. (genext2fs)[synopsis, description]: Likewise. * gnu/packages/package-management.scm (libostree)[description]: Likewise. * gnu/packages/python-xyz.scm (python-requests-file)[description]: Likewise & mark up. * gnu/packages/rails.scm (ruby-with-advisory-lock)[description]: Likewise. * gnu/packages/ruby.scm (ruby-rerun)[description]: Likewise. * guix/build/go-build-system.scm (setup-go-environment)<docstring>: Likewise. * guix/store/deduplication.scm (get-temp-link)<docstring>: Likewise.
2019-04-25gnu: bubblewrap: Edit description.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (bubblewrap)[description]: Mark up & edit.
2019-04-25gnu: perl-filesys-notify-simple: Edit description.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-filesys-notify-simple)[description]: Mark up & edit.
2019-04-25gnu: libimobiledevice: Edit description.Tobias Geerinckx-Rice
* gnu/packages/libusb.scm (libimobiledevice)[description]: Fix grammar & spelling.
2019-04-25gnu: libsvm: Update to 3.23.Tobias Geerinckx-Rice
* gnu/packages/machine-learning.scm (libsvm): Update to 3.23.
2019-04-25gnu: openfst: Update to 1.7.2.Tobias Geerinckx-Rice
* gnu/packages/machine-learning.scm (openfst): Update to 1.7.2.
2019-04-24gnu: r-xtable: Update to 1.8-4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xtable): Update to 1.8-4.
2019-04-24gnu: r-dbplyr: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.0.
2019-04-24gnu: r-testthat: Update to 2.1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-testthat): Update to 2.1.1.
2019-04-24gnu: r-igraph: Update to 1.2.4.1.Ricardo Wurmus
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.1.
2019-04-24gnu: r-pamr: Update to 1.56.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-pamr): Update to 1.56.1.
2019-04-24gnu: r-ggforce: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggforce): Update to 0.2.2.
2019-04-24gnu: r-rms: Update to 5.1-3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rms): Update to 5.1-3.1.
2019-04-24gnu: r-genetics: Update to 1.3.8.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-genetics): Update to 1.3.8.1.2.
2019-04-24gnu: r-fields: Update to 9.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-fields): Update to 9.7.
2019-04-24gnu: r-splitstackshape: Update to 1.4.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-splitstackshape): Update to 1.4.8.
2019-04-24gnu: r-emmeans: Update to 1.3.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.4.
2019-04-24gnu: r-sys: Update to 3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-sys): Update to 3.2.
2019-04-24gnu: zynaddsubfx: Update to 3.0.5.Tobias Geerinckx-Rice
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.5.
2019-04-24gnu: padthv1: Update to 0.9.7.Tobias Geerinckx-Rice
* gnu/packages/music.scm (padthv1): Update to 0.9.7.
2019-04-24gnu: samplv1: Update to 0.9.7.Tobias Geerinckx-Rice
* gnu/packages/music.scm (samplv1): Update to 0.9.7.
2019-04-24gnu: synthv1: Update to 0.9.7.Tobias Geerinckx-Rice
* gnu/packages/music.scm (synthv1): Update to 0.9.7.
2019-04-24gnu: drumkv1: Update to 0.9.7.Tobias Geerinckx-Rice
* gnu/packages/music.scm (drumkv1): Update to 0.9.7.
2019-04-24gnu: pdfpc: Update to 4.3.2.Tobias Geerinckx-Rice
* gnu/packages/pdf.scm (pdfpc): Update to 4.3.2.
2019-04-24gnu: gphoto2: Update to 2.5.20.Tobias Geerinckx-Rice
* gnu/packages/photo.scm (gphoto2): Update to 2.5.20.
2019-04-24gnu: rawtherapee: Update to 5.6.Tobias Geerinckx-Rice
* gnu/packages/photo.scm (rawtherapee): Update to 5.6. [inputs]: Add librsvg.
2019-04-24gnu: youtube-dl: Update to 2019.04.24.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-dl): Update to 2019.04.24.
2019-04-24gnu: emacs-ledger-mode: Use ledger as input.Pierre Neidhardt
* gnu/packages/finance.scm (emacs-ledger-mode)[inputs]: Add ledger. [arguments]: Patch path to ledger executable.
2019-04-24gnu: xl2tpd: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (xl2tpd)[source]: Hard-code NAME.
2019-04-24gnu: xl2tpd: Update to 1.3.14.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (xl2tpd): Update to 1.3.14.
2019-04-24gnu: ristretto: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (ristretto)[source]: Hard-code NAME.
2019-04-24gnu: ristretto: Update to 0.8.4.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (ristretto): Update to 0.8.4.
2019-04-24gnu: inxi-minimal: Update to 3.0.33-1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.33-1.
2019-04-24gnu: python2-sh: Fix build.Nicolas Goaziou
* gnu/packages/python-xyz.scm (python-sh): Fix build error with Python 2 due to failing tests.
2019-04-23gnu: libseccomp: Update to 2.4.1.Marius Bakke
* gnu/packages/linux.scm (libseccomp): Update to 2.4.1.
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