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2022-02-01gnu: r-randomizr: Update to 0.22.0....* gnu/packages/cran.scm (r-randomizr): Update to 0.22.0. Ricardo Wurmus
2022-02-01gnu: r-pillar: Update to 1.6.5....* gnu/packages/cran.scm (r-pillar): Update to 1.6.5. [propagated-inputs]: Add r-glue. Ricardo Wurmus
2022-02-01gnu: r-broom: Update to 0.7.12....* gnu/packages/cran.scm (r-broom): Update to 0.7.12. Ricardo Wurmus
2022-02-01gnu: r-energy: Update to 1.7-9....* gnu/packages/cran.scm (r-energy): Update to 1.7-9. Ricardo Wurmus
2022-02-01gnu: r-rcppthread: Update to 2.0.1....* gnu/packages/cran.scm (r-rcppthread): Update to 2.0.1. Ricardo Wurmus
2022-02-01gnu: r-glue: Update to 1.6.1....* gnu/packages/cran.scm (r-glue): Update to 1.6.1. Ricardo Wurmus
2022-02-01gnu: r-datawizard: Update to 0.2.3....* gnu/packages/cran.scm (r-datawizard): Update to 0.2.3. Ricardo Wurmus
2022-02-01gnu: lagrange: Update to 1.10.3....* gnu/packages/web-browsers.scm (lagrange): Update to 1.10.3. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> jgart via Guix-patches via
2022-02-01gnu: git-annex: Update to 10.20220127....* gnu/packages/haskell-apps.scm (git-annex): Update to 10.20220127. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Kyle Meyer
2022-02-01gnu: python-ipython: Fix CVE detection....* gnu/packages/python-xyz.scm (python-ipython)[properties]: New field. Efraim Flashner
2022-02-01gnu: %final-inputs-riscv64: Add comment....* gnu/packages/commencement.scm (%final-inputs-riscv64): Add comment explaining why this variable needs to exist. Efraim Flashner
2022-02-01gnu: libaio: Fix test suite on riscv64-linux....* gnu/packages/linux.scm (libaio)[arguments]: Add phase to adjust test code to properly handle riscv. Efraim Flashner
2022-02-01gnu: openblas: Fix building on riscv64-linux....* gnu/packages/maths.scm (openblas)[arguments]: Adjust make-flags on riscv64-linux to target the correct architecture when building for riscv64-linux. Efraim Flashner
2022-02-01gnu: i3-wm: Add 'upstream-name' and 'release-monitoring-url'....* gnu/packages/wm.scm (i3-wm)[properties]: New field. Ludovic Courtès
2022-02-01gnu: i3-wm: Update to 4.20.1....* gnu/packages/wm.scm (i3-wm): Update to 4.20.1. [build-system]: Change to MESON-BUILD-SYSTEM. [arguments]: Remove #:configure-flags. Yusuf Talha
2022-02-01gnu: Remove 'guile-3.0/libgc-7' variant....This variant had become unnecessary with 0aef94e7bcbd272720f14c5343f74da5201ef90a and related changes. * gnu/packages/guile.scm (guile-3.0/libgc-7): Remove. Ludovic Courtès
2022-02-01gnu: Add Lokke....* gnu/packages/guile.scm (guile-3.0-for-lokke): New variable. * gnu/packages/guile-xyz.scm (lokke): New variable. * gnu/packages/patches/guile-3.0.7-psyntax-nil.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ludovic Courtès
2022-01-31gnu: linux-libre 4.4: Update to 4.4.301....* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.301. (linux-libre-4.4-pristine-source): Update hash. Leo Famulari
2022-01-31gnu: linux-libre 4.9: Update to 4.9.299....* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.299. (linux-libre-4.9-pristine-source): Update hash. Leo Famulari
2022-01-31gnu: linux-libre 4.14: Update to 4.14.264....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.264. (linux-libre-4.14-pristine-source): Update hash. Leo Famulari
2022-01-31gnu: linux-libre 4.19: Update to 4.19.227....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.227. (linux-libre-4.19-pristine-source): Update hash. Leo Famulari
2022-01-31gnu: linux-libre 5.4: Update to 5.4.175....* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.175. (linux-libre-5.4-pristine-source): Update hash. Leo Famulari
2022-01-31gnu: linux-libre 5.10: Update to 5.10.95....* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.95. (linux-libre-5.10-pristine-source, deblob-scripts-5.10): Update hashes. Leo Famulari
2022-01-31gnu: linux-libre: Update to 5.15.18....* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.18. (linux-libre-5.15-pristine-source, deblob-scripts-5.18): Update hashes. Leo Famulari
2022-01-31gnu: linux-libre 5.16: Update to 5.16.4....* gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.4. (linux-libre-5.16-pristine-source, deblob-scripts-5.16): Update hashes. Leo Famulari
2022-01-31gnu: OBS: Use new package style....* gnu/packages/video.scm (obs): Use new package style. Signed-off-by: Leo Famulari <leo@famulari.name> Andrew Tropin
2022-01-31gnu: poke: Update to 2.0....* gnu/packages/engineering.scm (poke): Update to 2.0. Efraim Flashner
2022-01-31gnu: ruby-mustache: Fix race condition....* gnu/packages/patches/ruby-mustache-1.1.1-fix-race-condition-tests.patch: New file. * gnu/packages/ruby.scm (ruby-mustache)[source]<#:origin>: Add it. * gnu/local.mk (dist_patch_DATA): Add it. Danny Milosavljevic
2022-01-31gnu: Add scvelo....* gnu/packages/bioinformatics.scm (scvelo): New variable. Ricardo Wurmus
2022-01-31gnu: python-seaborn: Fix build....* gnu/packages/python-xyz.scm (python-seaborn)[source]: Add patch. [arguments]: Add build phase 'patch-more-tests. * gnu/packages/patches/python-seaborn-2690.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ricardo Wurmus
2022-01-31gnu: python-anndata: Update to 0.7.8....* gnu/packages/python-xyz.scm (python-anndata): Update to 0.7.8. [arguments]: Embed the appropriate version string instead of letting it try (and fail) to discover the correct string at load time. [propagated-inputs]: Add python-xlrd-1. Ricardo Wurmus
2022-01-31gnu: Add python-xlrd-1....* gnu/packages/python-xyz.scm (python-xlrd-1): New variable. Ricardo Wurmus
2022-01-31gnu: python-louvain-0.6: Update to 0.7.1....* gnu/packages/graph.scm (python-louvain-0.6): Update to 0.7.1. [arguments]: Add build phases 'find-igraph and 'pretend-version. [native-inputs]: Add python-setuptools-scm and python-wheel. Rename this variable... (python-louvain-0.7): ...to this, naturally. * gnu/packages/bioinformatics.scm (python-scanpy)[propagated-inputs]: Update reference to python-louvain-0.6. Ricardo Wurmus
2022-01-31gnu: python-louvain: Update to 0.16....* gnu/packages/graph.scm (python-louvain): Update to 0.16. Ricardo Wurmus
2022-01-31gnu: bwa-meth: Remove trailing #T from build phase....* gnu/packages/bioinformatics.scm (bwa-meth)[arguments]: Remove trailing #T from build phase. Ricardo Wurmus
2022-01-31gnu: bwa-meth: Update to 0.2.3....* gnu/packages/bioinformatics.scm (bwa-meth): Update to 0.2.3. Ricardo Wurmus
2022-01-31gnu: fontmanager: Add missing input....* gnu/packages/fontutils.scm (fontmanager)[native-inputs]: Add python-wrapper. Julien Lepiller
2022-01-31gnu: java-log4j-api: Update to 2.17.1....* gnu/packages/java.scm (java-log4j-api): Update to 2.17.1. Julien Lepiller
2022-01-31gnu: pre-commit: Update to 2.17.0....* gnu/packages/version-control.scm (pre-commit): Update to 2.17.0. Vinicius Monego
2022-01-31gnu: shotcut: Update to 22.01.30....* gnu/packages/video.scm (shotcut): Update to 22.01.30. Vinicius Monego
2022-01-31gnu: texlive-bin: Fix building on riscv64-linux....* gnu/packages/tex.scm (texlive-bin)[arguments]: Adjust configure-flags for riscv64-linux to skip luajit based binaries. Add phase to skip some tests. Efraim Flashner
2022-01-30gnu: Remove OpenSSL 1.0....This package no longer has any users in Guix. * gnu/packages/tls.scm (openssl-1.0): Remove variable. Marius Bakke
2022-01-30gnu: Remove unused patch....* gnu/packages/patches/openssl-CVE-2019-1559.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-01-30gnu: OpenSSL: Add 3.0....* gnu/packages/tls.scm (openssl-3.0): New variable. * gnu/packages/patches/openssl-3.0-c-rehash-in.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-01-30gnu: util-linux-with-udev: Remove input labels....* gnu/packages/linux.scm (util-linux+udev)[inputs]: Use MODIFY-INPUTS. Marius Bakke
2022-01-30gnu: expat: Update replacement to 2.4.4 [fixes CVE-2022-23852, CVE-2022-23990]....* gnu/packages/xml.scm (expat/fixed): Update to 2.4.4. Marius Bakke
2022-01-30gnu: waylandpp: Update to 0.2.9....* gnu/packages/freedesktop.scm (waylandpp): Update to 0.2.9. Marius Bakke
2022-01-30gnu: Add python-gwcs....* gnu/packages/astronomy.scm (python-gwcs): New variable. Signed-off-by: Vinicius Monego <monego@posteo.net> Sharlatan Hellseher
2022-01-30gnu: Add python-asdf-wcs-schemas....* gnu/packages/astronomy.scm (python-asdf-wcs-schemas): New variable. Signed-off-by: Vinicius Monego <monego@posteo.net> Sharlatan Hellseher
2022-01-30gnu: Add python-asdf-astropy....* gnu/packages/astronomy.scm (python-asdf-astropy): New variable. Signed-off-by: Vinicius Monego <monego@posteo.net> Sharlatan Hellseher