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2020-01-27gnu: r-genomicfeatures: Update to 1.38.1....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.38.1. Ricardo Wurmus
2020-01-27gnu: r-s4vectors: Update to 0.24.3....* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.24.3. Ricardo Wurmus
2020-01-27gnu: r-multiassayexperiment: Update to 1.12.2....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.2. Ricardo Wurmus
2020-01-27gnu: r-ropls: Update to 1.18.8....* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.8. Ricardo Wurmus
2020-01-27gnu: r-destiny: Update to 3.0.1....* gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.1. Ricardo Wurmus
2020-01-27gnu: linux-libre@4.19: Update to 4.19.99....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.99. (linux-libre-4.19-pristine-source): Update hash. Mark H Weaver
2020-01-27gnu: linux-libre@4.14: Update to 4.14.168....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.168. (linux-libre-4.14-pristine-source): Update hash. Mark H Weaver
2020-01-27gnu: emacs-gif-screencast: Update to 1.1....* gnu/packages/emacs-xyz.scm (emacs-gif-screencast): Update to 1.1. Pierre Neidhardt
2020-01-27gnu: light: Install udev rules to allow sudo-less invocations....* gnu/packages/linux.scm (light)[arguments]: Substitute the absolute paths of chgrp and chmod in 90-backlight.rules and install the rules file to the special lib/udev/rules.d/ directory of the out output. This allows for any member of the video group to set brightness using light without sudo. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Amin Bandali
2020-01-27build: cargo-build-system: Add pkg-config environment variables....* guix/build/cargo-build-system.scm (configure): Add environment variables to use system libgit2 and libssh2. * gnu/packages/crates-io.scm (rust-libgit2-sys-0.10, rust-libssh2-sys-0.2)[arguments]: Remove LIBGIT2 and LIBSSH2 environment variable settings. * gnu/packages/rust-apps.scm (tokei)[arguments]: Same. Efraim Flashner
2020-01-27gnu: rust-pcre2-sys-0.2: Delete vendored code....* gnu/packages/crates-io.scm (rust-pcre2-sys-0.2)[source]: Delete vendored code. [arguments]: Remove custom phase. (rust-pcre2-0.2, rust-grep-pcre2-0.1)[arguments]: Enable build. [native-inputs]: Add pkg-config, pcre2. Efraim Flashner
2020-01-27gnu: rust-libz-sys-1.0: Remove vendored code....* gnu/packages/crates-io.scm (rust-libz-sys-1.0)[source]: Remove vendored code. [arguments]: Remove custom phase. (rust-libgit2-sys-0.10)[arguments]: Don't unvendor missing code. (rust-libssh2-sys-0.2)[arguments]: Same. * gnu/packages/rust-apps.scm (tokei)[arguments]: Same. Efraim Flashner
2020-01-27gnu: rust-lzma-sys-0.1: Remove vendored code....* gnu/packages/crates-io.scm (rust-lzma-sys-0.1)[source]: Remove vendored code. [arguments]: Remove custom phase. Efraim Flashner
2020-01-27gnu: rust-libssh2-sys-0.2: Remove vendored code....* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2)[source]: Remove vendored code. [arguments]: Don't remove missing vendored code. (rust-libgit2-sys-0.10)[arguments]: Same. * gnu/packages/rust-apps.scm (tokei)[arguments]: Same. Efraim Flashner
2020-01-27gnu: rust-jemalloc-sys-0.3: Remove vendored code....* gnu/packages/crates-io.scm (rust-jemalloc-sys-0.3)[source]: Remove vendored code. [arguments]: Don't remove missing vendored code. Efraim Flashner
2020-01-27gnu: rust-libgit2-sys-0.10: Remove vendored code....* gnu/packages/crates-io.scm (rust-libgit2-sys-0.10)[source]: Remove vendored code. [arguments]: Don't remove missing vendored code. * gnu/packages/rust-apps.scm (tokei)[arguments]: Same. Efraim Flashner
2020-01-27gnu: r-fpc: Update to 2.2-4....* gnu/packages/statistics.scm (r-fpc): Update to 2.2-4. Ricardo Wurmus
2020-01-27gnu: r-rrcov: Update to 1.5-2....* gnu/packages/statistics.scm (r-rrcov): Update to 1.5-2. [propagated-inputs]: Remove r-cluster. Ricardo Wurmus
2020-01-27gnu: r-tidyr: Update to 1.0.2....* gnu/packages/statistics.scm (r-tidyr): Update to 1.0.2. Ricardo Wurmus
2020-01-27gnu: r-rngtools: Update to 1.5....* gnu/packages/statistics.scm (r-rngtools): Update to 1.5. [propagated-inputs]: Remove r-pkgmaker and r-stringr. Ricardo Wurmus
2020-01-27gnu: r-pkgmaker: Update to 0.31....* gnu/packages/statistics.scm (r-pkgmaker): Update to 0.31. [propagated-inputs]: Add r-assertthat. Ricardo Wurmus
2020-01-27gnu: r-xml: Update to 3.99-0.3....* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.3. Ricardo Wurmus
2020-01-27gnu: r-blob: Update to 1.2.1....* gnu/packages/statistics.scm (r-blob): Update to 1.2.1. [propagated-inputs]: Remove r-prettyunits. Ricardo Wurmus
2020-01-27gnu: r-rmarkdown: Update to 2.1....* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.1. Ricardo Wurmus
2020-01-27gnu: r-catools: Update to 1.18.0....* gnu/packages/statistics.scm (r-catools): Update to 1.18.0. Ricardo Wurmus
2020-01-27gnu: r-rcpparmadillo: Update to 0.9.800.4.0....* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.800.4.0. Ricardo Wurmus
2020-01-27gnu: r-rlang: Update to 0.4.3....* gnu/packages/statistics.scm (r-rlang): Update to 0.4.3. Ricardo Wurmus
2020-01-27gnu: r-knitr: Update to 1.27....* gnu/packages/statistics.scm (r-knitr): Update to 1.27. Ricardo Wurmus
2020-01-27gnu: r-foreign: Update to 0.8-75....* gnu/packages/statistics.scm (r-foreign): Update to 0.8-75. Ricardo Wurmus
2020-01-27gnu: r-shinycssloaders: Update to 0.3....* gnu/packages/cran.scm (r-shinycssloaders): Update to 0.3. Ricardo Wurmus
2020-01-27gnu: r-idpmisc: Update to 1.1.20....* gnu/packages/cran.scm (r-idpmisc): Update to 1.1.20. Ricardo Wurmus
2020-01-27gnu: r-rngwell: Update to 0.10-6....* gnu/packages/cran.scm (r-rngwell): Update to 0.10-6. Ricardo Wurmus
2020-01-27gnu: r-bio3d: Update to 2.4-1....* gnu/packages/cran.scm (r-bio3d): Update to 2.4-1. Ricardo Wurmus
2020-01-27gnu: r-parameters: Update to 0.4.1....* gnu/packages/cran.scm (r-parameters): Update to 0.4.1. Ricardo Wurmus
2020-01-27gnu: r-leiden: Update to 0.3.2....* gnu/packages/cran.scm (r-leiden): Update to 0.3.2. Ricardo Wurmus
2020-01-27gnu: r-rhpcblasctl: Update to 0.20-17....* gnu/packages/cran.scm (r-rhpcblasctl): Update to 0.20-17. Ricardo Wurmus
2020-01-27gnu: r-threejs: Update to 0.3.3....* gnu/packages/cran.scm (r-threejs): Update to 0.3.3. [native-inputs]: Use jquery 1.12.4 and threejs version r111. [arguments]: Adjust. Ricardo Wurmus
2020-01-27gnu: r-farver: Update to 2.0.3....* gnu/packages/cran.scm (r-farver): Update to 2.0.3. Ricardo Wurmus
2020-01-27gnu: r-adegenet: Update to 2.1.2....* gnu/packages/cran.scm (r-adegenet): Update to 2.1.2. Ricardo Wurmus
2020-01-27gnu: r-cobs: Update to 1.3-4....* gnu/packages/cran.scm (r-cobs): Update to 1.3-4. Ricardo Wurmus
2020-01-27gnu: r-dorng: Update to 1.8.2....* gnu/packages/cran.scm (r-dorng): Update to 1.8.2. [propagated-inputs]: Remove r-pkgmaker. Ricardo Wurmus
2020-01-27gnu: r-future: Update to 1.16.0....* gnu/packages/cran.scm (r-future): Update to 1.16.0. Ricardo Wurmus
2020-01-27gnu: r-rmpfr: Update to 0.8-1....* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-1. [inputs]: Add gmp. [native-inputs]: Add pkg-config. Ricardo Wurmus
2020-01-27gnu: r-gmp: Update to 0.5-13.6....* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.6. Ricardo Wurmus
2020-01-27gnu: r-afex: Update to 0.26-0....* gnu/packages/cran.scm (r-afex): Update to 0.26-0. Ricardo Wurmus
2020-01-27gnu: r-gh: Update to 1.1.0....* gnu/packages/cran.scm (r-gh): Update to 1.1.0. [propagated-inputs]: Add r-cli. Ricardo Wurmus
2020-01-27gnu: r-sjplot: Update to 2.8.2....* gnu/packages/cran.scm (r-sjplot): Update to 2.8.2. [propagated-inputs]: Remove r-ggrepel, r-glmmtmb, r-lme4, r-magrittr, r-modelr, and r-psych. Ricardo Wurmus
2020-01-27gnu: r-effectsize: Update to 0.1.1....* gnu/packages/cran.scm (r-effectsize): Update to 0.1.1. Ricardo Wurmus
2020-01-27gnu: r-performance: Update to 0.4.3....* gnu/packages/cran.scm (r-performance): Update to 0.4.3. Ricardo Wurmus
2020-01-27gnu: r-bayestestr: Update to 0.5.1....* gnu/packages/cran.scm (r-bayestestr): Update to 0.5.1. Ricardo Wurmus
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