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2022-02-01gnu: r-actuar: Update to 3.2-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-actuar): Update to 3.2-1.
2022-02-01gnu: r-terra: Update to 1.5-17.Ricardo Wurmus
* gnu/packages/cran.scm (r-terra): Update to 1.5-17.
2022-02-01gnu: r-spdep: Update to 1.2-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-spdep): Update to 1.2-2.
2022-02-01gnu: r-lavaan: Update to 0.6-10.Ricardo Wurmus
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-10.
2022-02-01gnu: r-tiff: Update to 0.1-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-tiff): Update to 0.1-11.
2022-02-01gnu: r-admisc: Update to 0.23.Ricardo Wurmus
* gnu/packages/cran.scm (r-admisc): Update to 0.23.
2022-02-01gnu: r-effectsize: Update to 0.6.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-effectsize): Update to 0.6.0.1.
2022-02-01gnu: r-raster: Update to 3.5-15.Ricardo Wurmus
* gnu/packages/cran.scm (r-raster): Update to 3.5-15.
2022-02-01gnu: r-precrec: Update to 0.12.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-precrec): Update to 0.12.8.
2022-02-01gnu: r-reticulate: Update to 1.24.Ricardo Wurmus
* gnu/packages/cran.scm (r-reticulate): Update to 1.24.
2022-02-01gnu: r-renv: Update to 0.15.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-renv): Update to 0.15.2.
2022-02-01gnu: r-rastervis: Update to 0.51.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rastervis): Update to 0.51.2.
2022-02-01gnu: r-randomizr: Update to 0.22.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-randomizr): Update to 0.22.0.
2022-02-01gnu: r-pillar: Update to 1.6.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-pillar): Update to 1.6.5. [propagated-inputs]: Add r-glue.
2022-02-01gnu: r-broom: Update to 0.7.12.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 0.7.12.
2022-02-01gnu: r-energy: Update to 1.7-9.Ricardo Wurmus
* gnu/packages/cran.scm (r-energy): Update to 1.7-9.
2022-02-01gnu: r-rcppthread: Update to 2.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppthread): Update to 2.0.1.
2022-02-01gnu: r-glue: Update to 1.6.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-glue): Update to 1.6.1.
2022-02-01gnu: r-datawizard: Update to 0.2.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-datawizard): Update to 0.2.3.
2022-02-01gnu: lagrange: Update to 1.10.3.jgart via Guix-patches via
* gnu/packages/web-browsers.scm (lagrange): Update to 1.10.3. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-02-01gnu: git-annex: Update to 10.20220127.Kyle Meyer
* gnu/packages/haskell-apps.scm (git-annex): Update to 10.20220127. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-02-01gnu: python-ipython: Fix CVE detection.Efraim Flashner
* gnu/packages/python-xyz.scm (python-ipython)[properties]: New field.
2022-02-01gnu: %final-inputs-riscv64: Add comment.Efraim Flashner
* gnu/packages/commencement.scm (%final-inputs-riscv64): Add comment explaining why this variable needs to exist.
2022-02-01gnu: libaio: Fix test suite on riscv64-linux.Efraim Flashner
* gnu/packages/linux.scm (libaio)[arguments]: Add phase to adjust test code to properly handle riscv.
2022-02-01gnu: openblas: Fix building on riscv64-linux.Efraim Flashner
* gnu/packages/maths.scm (openblas)[arguments]: Adjust make-flags on riscv64-linux to target the correct architecture when building for riscv64-linux.
2022-02-01gnu: i3-wm: Add 'upstream-name' and 'release-monitoring-url'.Ludovic Courtès
* gnu/packages/wm.scm (i3-wm)[properties]: New field.
2022-02-01gnu: i3-wm: Update to 4.20.1.Yusuf Talha
* gnu/packages/wm.scm (i3-wm): Update to 4.20.1. [build-system]: Change to MESON-BUILD-SYSTEM. [arguments]: Remove #:configure-flags.
2022-02-01gnu: Remove 'guile-3.0/libgc-7' variant.Ludovic Courtès
This variant had become unnecessary with 0aef94e7bcbd272720f14c5343f74da5201ef90a and related changes. * gnu/packages/guile.scm (guile-3.0/libgc-7): Remove.
2022-02-01gnu: Add Lokke.Ludovic Courtès
* gnu/packages/guile.scm (guile-3.0-for-lokke): New variable. * gnu/packages/guile-xyz.scm (lokke): New variable. * gnu/packages/patches/guile-3.0.7-psyntax-nil.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2022-01-31gnu: linux-libre 4.4: Update to 4.4.301.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.301. (linux-libre-4.4-pristine-source): Update hash.
2022-01-31gnu: linux-libre 4.9: Update to 4.9.299.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.299. (linux-libre-4.9-pristine-source): Update hash.
2022-01-31gnu: linux-libre 4.14: Update to 4.14.264.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.264. (linux-libre-4.14-pristine-source): Update hash.
2022-01-31gnu: linux-libre 4.19: Update to 4.19.227.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.227. (linux-libre-4.19-pristine-source): Update hash.
2022-01-31gnu: linux-libre 5.4: Update to 5.4.175.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.175. (linux-libre-5.4-pristine-source): Update hash.
2022-01-31gnu: linux-libre 5.10: Update to 5.10.95.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.95. (linux-libre-5.10-pristine-source, deblob-scripts-5.10): Update hashes.
2022-01-31gnu: linux-libre: Update to 5.15.18.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.18. (linux-libre-5.15-pristine-source, deblob-scripts-5.18): Update hashes.
2022-01-31gnu: linux-libre 5.16: Update to 5.16.4.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.4. (linux-libre-5.16-pristine-source, deblob-scripts-5.16): Update hashes.
2022-01-31gnu: OBS: Use new package style.Andrew Tropin
* gnu/packages/video.scm (obs): Use new package style. Signed-off-by: Leo Famulari <leo@famulari.name>
2022-01-31gnu: poke: Update to 2.0.Efraim Flashner
* gnu/packages/engineering.scm (poke): Update to 2.0.
2022-01-31gnu: ruby-mustache: Fix race condition.Danny Milosavljevic
* gnu/packages/patches/ruby-mustache-1.1.1-fix-race-condition-tests.patch: New file. * gnu/packages/ruby.scm (ruby-mustache)[source]<#:origin>: Add it. * gnu/local.mk (dist_patch_DATA): Add it.
2022-01-31gnu: Add scvelo.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (scvelo): New variable.
2022-01-31gnu: python-seaborn: Fix build.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-seaborn)[source]: Add patch. [arguments]: Add build phase 'patch-more-tests. * gnu/packages/patches/python-seaborn-2690.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2022-01-31gnu: python-anndata: Update to 0.7.8.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-anndata): Update to 0.7.8. [arguments]: Embed the appropriate version string instead of letting it try (and fail) to discover the correct string at load time. [propagated-inputs]: Add python-xlrd-1.
2022-01-31gnu: Add python-xlrd-1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-xlrd-1): New variable.
2022-01-31gnu: python-louvain-0.6: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/graph.scm (python-louvain-0.6): Update to 0.7.1. [arguments]: Add build phases 'find-igraph and 'pretend-version. [native-inputs]: Add python-setuptools-scm and python-wheel. Rename this variable... (python-louvain-0.7): ...to this, naturally. * gnu/packages/bioinformatics.scm (python-scanpy)[propagated-inputs]: Update reference to python-louvain-0.6.
2022-01-31gnu: python-louvain: Update to 0.16.Ricardo Wurmus
* gnu/packages/graph.scm (python-louvain): Update to 0.16.
2022-01-31gnu: bwa-meth: Remove trailing #T from build phase.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bwa-meth)[arguments]: Remove trailing #T from build phase.
2022-01-31gnu: bwa-meth: Update to 0.2.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bwa-meth): Update to 0.2.3.
2022-01-31gnu: fontmanager: Add missing input.Julien Lepiller
* gnu/packages/fontutils.scm (fontmanager)[native-inputs]: Add python-wrapper.
2022-01-31gnu: java-log4j-api: Update to 2.17.1.Julien Lepiller
* gnu/packages/java.scm (java-log4j-api): Update to 2.17.1.
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