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2024-01-17gnu: r-gmp: Update to 0.7-4....* gnu/packages/cran.scm (r-gmp): Update to 0.7-4. Change-Id: I8f31a58c57203f5c477093248e540d21075356da Ricardo Wurmus
2024-01-17gnu: r-ks: Update to 1.14.2....* gnu/packages/cran.scm (r-ks): Update to 1.14.2. [propagated-inputs]: Remove r-plot3d. Change-Id: I8c7abbbd691ca0de5da704cbfa170aeb2949d8e1 Ricardo Wurmus
2024-01-17gnu: r-hdf5r: Update to 1.3.9....* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.9. Change-Id: Ib6172699049cf065a2c116fbeb23ef91f7455e64 Ricardo Wurmus
2024-01-17gnu: r-fnn: Update to 1.1.4....* gnu/packages/cran.scm (r-fnn): Update to 1.1.4. Change-Id: I90e2d6f47004f92e8f9d05ffb7e56b7012be6215 Ricardo Wurmus
2024-01-17gnu: r-expm: Update to 0.999-9....* gnu/packages/cran.scm (r-expm): Update to 0.999-9. Change-Id: Ia036cd592e465af3101385d1aff5e0e850f5a8a9 Ricardo Wurmus
2024-01-17gnu: r-uuid: Update to 1.2-0....* gnu/packages/cran.scm (r-uuid): Update to 1.2-0. Change-Id: I3d2356a962353c052871f3876ff3b0b7176c6c30 Ricardo Wurmus
2024-01-17gnu: r-timeseries: Update to 4032.109....* gnu/packages/cran.scm (r-timeseries): Update to 4032.109. Change-Id: I7f70021db91fcc4e23cca07d69e2ea7598a0178b Ricardo Wurmus
2024-01-17gnu: r-statsexpressions: Update to 1.5.3....* gnu/packages/cran.scm (r-statsexpressions): Update to 1.5.3. Change-Id: Ia8fec353102e48f894d57f02ba9dd26196b65b59 Ricardo Wurmus
2024-01-17gnu: r-ddalpha: Update to 1.3.15....* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.15. Change-Id: Ie1d591758470e1dc89c05bf829774a3db4bb8245 Ricardo Wurmus
2024-01-17gnu: r-ff: Update to 4.0.12....* gnu/packages/cran.scm (r-ff): Update to 4.0.12. Change-Id: I8f6c1b2de8eaff593d3521886259015de029ceff Ricardo Wurmus
2024-01-17gnu: r-rcppspdlog: Update to 0.0.16....* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.16. Change-Id: Ie64910ef2c989830b48c84b69b9ceceffccf775a Ricardo Wurmus
2024-01-17gnu: r-pkgload: Update to 1.3.4....* gnu/packages/cran.scm (r-pkgload): Update to 1.3.4. Change-Id: I5aa683b1ce91c3fd6ee9ed5015f9a0dabda88b9e Ricardo Wurmus
2024-01-17gnu: r-ggvenndiagram: Update to 1.5.0....* gnu/packages/cran.scm (r-ggvenndiagram): Update to 1.5.0. [propagated-inputs]: Remove r-tidyr; add r-venn and r-yulab-utils. Change-Id: Ic065aaf5f8e62f8c1f23e6c845dde88bbc682f69 Ricardo Wurmus
2024-01-17gnu: r-proj4: Update to 1.0-14....* gnu/packages/cran.scm (r-proj4): Update to 1.0-14. Change-Id: I97575fc9f094b0e3cedb33dc83bbea286ed6c63d Ricardo Wurmus
2024-01-17gnu: r-ggstatsplot: Update to 0.12.2....* gnu/packages/cran.scm (r-ggstatsplot): Update to 0.12.2. Change-Id: Iafe26006e36b482da64afa5c1ae88176ba2590d0 Ricardo Wurmus
2024-01-17gnu: r-cplm: Update to 0.7-12....* gnu/packages/cran.scm (r-cplm): Update to 0.7-12. Change-Id: I59dee59bdf25589ffe866f69996facfe39234b39 Ricardo Wurmus
2024-01-17gnu: r-collapse: Update to 2.0.9....* gnu/packages/cran.scm (r-collapse): Update to 2.0.9. Change-Id: I748bd138cb79ea3af4d90788544e8f1cecb91440 Ricardo Wurmus
2024-01-17gnu: Add r-venn....* gnu/packages/cran.scm (r-venn): New variable. Change-Id: I6ec3e890cab6e9042686148b7c52988f0dbb878e Ricardo Wurmus
2024-01-17gnu: python-snaptools: Disable tests....* gnu/packages/bioinformatics.scm (python-snaptools)[arguments]: Disable tests. Change-Id: I4934bda3cfbaf42a87f57035ec12d084112dcc24 Ricardo Wurmus
2024-01-17gnu: Add linux-libre 6.7....* gnu/packages/linux.scm (linux-libre-6.7-version, linux-libre-6.7-gnu-revision, deblob-scripts-6.7, linux-libre-6.7-pristine-source, linux-libre-6.7-source, linux-libre-headers-6.7, linux-libre-6.7): New variables. * gnu/packages/aux-files/linux-libre/6.7-arm.conf, gnu/packages/aux-files/linux-libre/6.7-arm64.conf, gnu/packages/aux-files/linux-libre/6.7-i686.conf, gnu/packages/aux-files/linux-libre/6.7-x86.conf: New files. * Makefile.am (AUX_FILES): Add them. * Makefile.am: Update my copyright header. Change-Id: I88b633933875f64bd2859774419e077d8f36d75b Signed-off-by: Leo Famulari <leo@famulari.name> Wilko Meyer
2024-01-17gnu: gmid: Update to 2.0....* gnu/packages/web.scm (gmid): Update it. Change-Id: I8f1bcd36130a63d07e934093b5b12cc01a6d5022 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> cage
2024-01-17gnu: perl-image-exiftool: Update to 12.70....* gnu/packages/photo.scm (perl-image-exiftool): Update to 12.70. Change-Id: If8e26b7e92cb530391cdd1dd12e78b371494a6b3 kiasoc5
2024-01-17gnu: Add go-github-com-charmbracelet-harmonica....* gnu/packages/golang.scm (go-github-com-charmbracelet-harmonica): New variable. Change-Id: I7e08006571be4e6b21eb4df3df8f3c92a412c0ca Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Artyom V. Poptsov
2024-01-17gnu: ngtcp2: Build libngtcp2_crypto_gnutls....* gnu/packages/networking.scm (ngtcp2)[arguments]<#:configure-flags>: Add --with-gnutls. [native-inputs]: Add pkg-config. [inputs]: Add gnutls. Change-Id: Id3a9210992d203a57a9b791f3c3752f2ebd3e634 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Tomas Volf
2024-01-17gnu: ngtcp2: Update to 1.1.0....* gnu/packages/networking.scm (ngtcp2): Update to 1.1.0. Change-Id: I7f6b08952ba508207c8dedbd68c7c48dd17dd0ff Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Tomas Volf
2024-01-17gnu: Add nghttp3....* gnu/packages/web.scm (nghttp3): New variable. Change-Id: I4ed318506f6d3bdd0c47a367b1dcc1b4454c09b2 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Tomas Volf
2024-01-17gnu: web: Delete trailing whitespace....* gnu/packages/web.scm (krona-tools): Delete trailing whitespace. Change-Id: Ide601b011d3e2c3c736bf041571f9ab00b5b5b1d Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Tomas Volf
2024-01-17gnu: Add r-caic4....* gnu/packages/cran.scm (r-caic4): New variable. Change-Id: Ifdfb6e69c7d1801b347ce16b4ee48a4950963fe4 Signed-off-by: Ricardo Wurmus <rekado@elephly.net> nafkhamdc
2024-01-17gnu: powertop: Correct package description....* gnu/packages/linux.scm (powertop): Correct package description. Change-Id: Ifc81ed62158df8b3c235d335731590e977dcc725 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Ian Eure
2024-01-17gnu: Add tgif....* gnu/packages/image.scm (tgif): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Change-Id: I4fd6bf5ae25806775e75dcca680a067f5d80ef5e spacecadet
2024-01-17gnu: Add python-pandera....* gnu/packages/python-science.scm (python-pandera): New variable. Troy Figiel
2024-01-17gnu: Add python-pandas-stubs....* gnu/packages/python-science.scm (python-pandas-stubs): New variable. Troy Figiel
2024-01-17gnu: Add python-typeguard-4....* gnu/packages/python-xyz.scm (python-typeguard-4): New variable. Change-Id: Ic5728766e8171dc31a82056f55a8c00680db5870 Troy Figiel
2024-01-17gnu: Add python-concurrent-log-handler....* gnu/packages/python-xyz.scm (python-concurrent-log-handler): New variable. Troy Figiel
2024-01-17gnu: Add python-pdf2image....* gnu/packages/python-xyz.scm (python-pdf2image): New variable. Troy Figiel
2024-01-16gnu: abjad-ext-ipython: Fix build....* gnu/packages/music.scm (abjad-ext-ipython): Fix build. [propagated-inputs]: Add python-sphinx-autodoc-typehints. Change-Id: Id20c0527e61b8be194c5387c6c43fdf82ab5ff09 Sharlatan Hellseher
2024-01-16gnu: python-deepdish: Fix build....* gnu/packages/python-science.scm (python-deepdish): Fix build. [build-system]: Swap to pyproject-build-system. [arguments]<#:test-flags>: Silent failing tests. Change-Id: I4c4df66fc80434aaf5b95a7a62b83e0c1c02a4c6 Sharlatan Hellseher
2024-01-16gnu: Add samtools-1.14....* gnu/packages/bioinformatics.scm (samtools-1.14): New variable. Change-Id: I0bd35b3865d7a417f55f1f768f7eb0c78a795e0f Ricardo Wurmus
2024-01-16gnu: samtools: Update to 1.19....* gnu/packages/bioinformatics.scm (samtools): Update to 1.19. [source]: Simplify snippet. Change-Id: If0e02bbbc8e0443eb418c078dc47525f432d7ebe Ricardo Wurmus
2024-01-16gnu: htslib: Update to 1.19....* gnu/packages/bioinformatics.scm (htslib): Update to 1.19. Change-Id: I4d66d8ce37bfd335411a2acc6060f9a8c20c9e4a Ricardo Wurmus
2024-01-16gnu: htscodecs: Update to 1.6.0....* gnu/packages/bioinformatics.scm (htscodecs): Update to 1.6.0. Change-Id: Ibd5be30e8fbe7fe5d0ef494c1b1e0cd9ec3333cc Ricardo Wurmus
2024-01-16gnu: Add python-prisma....* gnu/packages/databases.scm (python-prisma): New variable. Change-Id: I7df9b5600fb49ef46a73678323bc29993f35fae2 Ricardo Wurmus
2024-01-16gnu: Add python-strenum....* gnu/packages/python-xyz.scm (python-strenum): New variable. Change-Id: I6b6d64024db9358ea0a65cfd6c7cd6f94747de42 Ricardo Wurmus
2024-01-16gnu: python-readpaf: Explicitly disable tests....* gnu/packages/bioinformatics.scm (python-readpaf)[arguments]: Disable tests. Change-Id: I28ddfa46675b74bd5073c12e5d33bcbf9dee8252 Ricardo Wurmus
2024-01-16gnu: python-pyls-black: Fix build....* gnu/packages/patches/python-pyls-black-41.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python-xyz.scm (python-pyls-black)[source]: Add patch. [build-system]: Use pyproject-build-system. [arguments]: Disable one failing test. Change-Id: I14b2982644e58c0b43d76838febc6dfceb220b15 Ricardo Wurmus
2024-01-16gnu: debian-ports-archive-keyring: Update to 2024.01.05....* gnu/packages/debian.scm (debian-ports-archive-keyring): Update to 2024.01.05. Change-Id: Ibaa279a91d9e39804eb5cc1bf759ca3afd69e962 Efraim Flashner
2024-01-16gnu: debootstrap: Update to 1.0.134....* gnu/packages/debian.scm (debootstrap): Update to 1.0.134. [arguments]: Remove obsolete substitution in 'patch-source phase. Change-Id: I2a50ae75a43c0970e3ef866e02c49d87094e14eb Efraim Flashner
2024-01-16gnu: gourmet: Add missing input....* gnu/packages/nutrition.scm (gourmet)[inputs]: Add python-toml. Change-Id: I53bc9b0247c6dc32c5ec6e3cc518dbc982362bd2 Ricardo Wurmus
2024-01-16gnu: python-pyrdfa3: Update to 3.6.2....* gnu/packages/rdf.scm (python-pyrdfa3): Update to 3.6.2. [build-system]: Use pyproject-build-system. [arguments]: Remove custom build phases. [propagated-inputs]: Add python-requests. Change-Id: Ie8a1a369a569d29c8f43248d03f024e6cc19c004 Ricardo Wurmus
2024-01-16gnu: python-clingraph: Update to 1.1.2....* gnu/packages/potassco.scm (python-clingraph): Update to 1.1.2. Change-Id: I5910853d39389ff9ad981543204fd8ef1445e495 Ricardo Wurmus