aboutsummaryrefslogtreecommitdiff
path: root/gnu/packages
AgeCommit message (Collapse)Author
2019-12-15gnu: r-rhisat2: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.2.0. [arguments]: Add phase to make package reproducible and to avoid shelling out to 'which'. [native-inputs]: Remove which.
2019-12-15gnu: r-quasr: Update to 1.26.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.26.0.
2019-12-15gnu: r-rqc: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.20.0.
2019-12-15gnu: r-birewire: Update to 3.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.18.0.
2019-12-15gnu: r-birta: Update to 1.30.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-birta): Update to 1.30.0.
2019-12-15gnu: r-ropls: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.0. [propagated-inputs]: Add r-multidataset.
2019-12-15gnu: r-biosigner: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.0. [propagated-inputs]: Add r-multidataset.
2019-12-15gnu: r-annotatr: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.12.1.
2019-12-15gnu: r-rsubread: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.0.0.
2019-12-15gnu: r-flowutils: Update to 1.50.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.50.0.
2019-12-15gnu: r-consensusclusterplus: Update to 1.50.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.50.0.
2019-12-15gnu: r-flowcore: Update to 1.52.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowcore): Update to 1.52.1. [propagated-inputs]: Remove r-corpcor, r-graph, r-mass, and r-rrcov; add r-cytolib.
2019-12-15gnu: r-flowmeans: Update to 1.46.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.46.0.
2019-12-15gnu: r-flowsom: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowsom): Update to 1.18.0. [propagated-inputs]: Add r-cytoml, r-flowworkspace, and r-rcolorbrewer; remove r-flowutils.
2019-12-15gnu: r-mixomics: Update to 6.10.6.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.6.
2019-12-15gnu: r-rcistarget: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.6.0.
2019-12-15gnu: r-cicero: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.0.
2019-12-15gnu: r-genie3: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.8.0.
2019-12-15gnu: r-roc: Update to 1.62.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-roc): Update to 1.62.0. [propagated-inputs]: Add r-knitr.
2019-12-15gnu: r-watermelon: Update to 1.30.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-watermelon): Update to 1.30.0.
2019-12-15gnu: r-gdsfmt: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.22.0.
2019-12-15gnu: r-bigmelon: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.12.0.
2019-12-15gnu: r-seqbias: Update to 1.34.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.34.0.
2019-12-15gnu: r-reqon: Update to 1.32.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.32.0.
2019-12-15gnu: r-wavcluster: Update to 2.20.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.20.0.
2019-12-15gnu: r-timeseriesexperiment: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.4.0.
2019-12-15gnu: r-variantfiltering: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.22.0.
2019-12-15gnu: r-genomegraphs: Update to 1.46.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomegraphs): Update to 1.46.0.
2019-12-15gnu: r-wavetiling: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-wavetiling): Update to 1.28.0.
2019-12-15gnu: r-variancepartition: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.16.0.
2019-12-15gnu: r-htqpcr: Update to 1.40.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.40.0.
2019-12-15gnu: r-unifiedwmwqpcr: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.22.0.
2019-12-15gnu: r-genefilter: Update to 1.68.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.68.0. [propagated-inputs]: Remove r-s4vectors and add r-biocgenerics.
2019-12-15gnu: r-deseq2: Update to 1.26.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.26.0.
2019-12-15gnu: r-dexseq: Update to 1.32.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.32.0.
2019-12-15gnu: r-annotationforge: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.28.0.
2019-12-15gnu: r-rbgl: Update to 1.62.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.62.1.
2019-12-15gnu: r-gseabase: Update to 1.48.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.48.0.
2019-12-15gnu: r-category: Update to 2.52.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-category): Update to 2.52.1.
2019-12-15gnu: r-gostats: Update to 2.52.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.52.0.
2019-12-15gnu: r-shortread: Update to 1.44.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.0.
2019-12-15gnu: r-systempiper: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.20.0.
2019-12-15gnu: r-grohmm: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.20.0.
2019-12-15gnu: r-biocviews: Update to 1.54.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.54.0.
2019-12-15gnu: r-biocstyle: Update to 2.14.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.14.2.
2019-12-15gnu: r-bioccheck: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.22.0.
2019-12-15gnu: r-s4vectors: Update to 0.24.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.24.1.
2019-12-15gnu: r-iranges: Update to 2.20.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.20.1.
2019-12-15gnu: r-genomeinfodb: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.22.0.
2019-12-15gnu: r-edger: Update to 3.28.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.28.0.
generated by cgit