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2024-03-19gnu: r-genomeinfodb: Update to 1.38.8.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.8. [propagated-inputs]: Add r-rcurl. Change-Id: Icd046f9d32486d1ec104d5e564177382616b7290
2024-03-15gnu: r-clusterprofiler: Update to 4.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.10.1. Change-Id: I05b41c27d1e1ac8b2887845df5a4a75d45513929
2024-03-15gnu: r-zlibbioc: Update to 1.48.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-zlibbioc): Update to 1.48.2. [native-inputs]: Add r-knitr. Change-Id: Iee1c599473d30532660eb3770cf471ff979530dd
2024-03-15gnu: r-stringdb: Update to 2.14.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.14.3. [propagated-inputs]: Remove r-rcurl; add r-httr. Change-Id: Id46873bee69cdd1047002db3505ff5420097e9e9
2024-03-15gnu: r-gsva: Update to 1.50.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gsva): Update to 1.50.1. Change-Id: Ib298992cb9ea4615fe3888e799c332e778a7b5be
2024-03-15gnu: r-genomicfeatures: Update to 1.54.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.54.4. [propagated-inputs]: Remove r-rcurl; add r-httr and r-rjson. Change-Id: Iaed5177d04bc1c292dfad607f82401f45cfd02bc
2024-03-15gnu: r-genomeinfodb: Update to 1.38.7.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.7. [propagated-inputs]: Remove r-rcurl. Change-Id: Ifc265a49ed946f3548ff279b930a8346c42025a8
2024-03-15gnu: r-deseq2: Update to 1.42.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.42.1. Change-Id: Ida0b7ad662c44b2b12af487bb6aa8364874ce3da
2024-03-15gnu: r-biostrings: Update to 2.70.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.70.3. Change-Id: I4a921a148d9f54be13967ed0e3092353a683f20f
2024-03-15gnu: r-coregx: Update to 2.6.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-coregx): Update to 2.6.1. Change-Id: Icb0eb5a7697811f4272cda3d42d3c428bb59bd23
2024-03-15gnu: r-asics: Update to 2.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-asics): Update to 2.18.1. Change-Id: I760771fd8fe57984ae1d0c96b72cb63562a1b43e
2024-03-06gnu: r-snprelate: Update to 1.36.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-snprelate): Update to 1.36.1. Change-Id: I5cf14d463c0f4ca3707a8ac33c7a06baa4337789
2024-03-06gnu: r-s4arrays: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.2.1. Change-Id: I68c0ee03264073e8816fc92fbaa97ebb6c5036ed
2024-03-06gnu: r-ggcyto: Update to 1.30.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.30.2. Change-Id: I29c123aa60347b491412631f036923c3bbb7d6c9
2024-03-06gnu: r-ggtree: Update to 3.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.10.1. Change-Id: I62eec59a6be3f806261198a1d39eb38ee86a9a79
2024-03-06gnu: r-nebulosa: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nebulosa): Update to 1.12.1. [propagated-inputs]: Remove r-seurat; add r-ggrastr and r-seuratobject. Change-Id: If301102ec02ce618ed1ebeff17a9d7e0845e847c
2024-03-06gnu: r-conos: Update to 1.5.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-conos): Update to 1.5.2. Change-Id: Ia2192481d7d829ef47fec23d4fc8c028abce7098
2024-02-26gnu: r-dmrseq: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.22.1. Change-Id: I7c05a4927a3984917c6de7bc5daa3f28794894d7
2024-02-26gnu: r-beachmat: Update to 2.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.18.1. Change-Id: I854c4c21cad66e3fb2bfe63fe01c31c3aff7d109
2024-02-26gnu: r-hdf5array: Update to 1.30.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.30.1. Change-Id: I48d733554b9c74e10d29b123008ba6d20fa85641
2024-02-26gnu: r-variancepartition: Update to 1.32.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.5. Change-Id: I9195cbe28f85001bcd91fa3d57f0017db5b352b7
2024-02-26gnu: r-a4: Update to 1.50.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-a4): Update to 1.50.1. Change-Id: If07b255590ad99146a81729af073aac67cd535d4
2024-02-26gnu: r-chippeakanno: Update to 3.36.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.36.1. Change-Id: I133f7ca3032f5f5722a8d5d9cbf1bf1da42ff4a9
2024-02-26gnu: r-seqarray: Update to 1.42.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-seqarray): Update to 1.42.2. Change-Id: I6b4915c8dbdf14054125cac33bfddde4605fbc58
2024-02-26gnu: r-edger: Update to 4.0.16.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.16. Change-Id: I542bbe7f290a5282f76eea7b88f605f6fa714624
2024-02-26gnu: r-anf: Update to 1.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anf): Update to 1.24.1. Change-Id: I5843d257e4312101fb1b0dc9bbb49bd088bb3b91
2024-02-26gnu: r-anvil: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.14.2. Change-Id: I91fa1253e5f174d9d1d445edd873ceb23a783787
2024-02-19gnu: r-pscbs: Update to 0.67.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-pscbs): Update to 0.67.0. Change-Id: Ib60a434d40ede5f0c24590c65c45fb7e99affb2a
2024-02-15gnu: r-sparsearray: Update to 1.2.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.4. Change-Id: If4a2fe3e569de4bbeb3d32f9426cfe0dda8b3a63
2024-02-15gnu: r-variancepartition: Update to 1.32.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.3. Change-Id: I1ae9506043ac4d8ac8f71464849150fee8df53d6
2024-02-15gnu: r-glmgampoi: Update to 1.14.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-glmgampoi): Update to 1.14.3. Change-Id: Ia30075034acb164459d04bde7d25d0a6f8f85202
2024-02-15gnu: r-edger: Update to 4.0.15.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.15. Change-Id: I8d7f513f2458d14096332040dc37219d69fb44d0
2024-02-15gnu: r-annotationhubdata: Update to 1.32.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-annotationhubdata): Update to 1.32.1. Change-Id: Ic906e18c55fd269a6ebf4c959b9605fd1a90a054
2024-02-11gnu: r-bionero: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.10.1. Change-Id: I26b6c35d8966744bbcb79d98328c9734360f04f3
2024-02-11gnu: r-biocset: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.16.1. Change-Id: Ib758189b9439ec822edb2e85d261b4ccd8618609
2024-02-11gnu: r-bgx: Update to 1.68.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.68.3. Change-Id: I8aa747dd0a725f84dca1441693ce573a4567f70c
2024-02-11gnu: r-gofuncr: Update to 1.22.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.22.2. Change-Id: Iba4be0c63d792caddcea69ee77aa94ce6869c1d2
2024-02-11gnu: r-glmgampoi: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-glmgampoi): Update to 1.14.2. Change-Id: Id7265b49246e75d23086dc159da9b4f69a756a7d
2024-02-11gnu: r-trajectoryutils: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-trajectoryutils): Update to 1.10.1. Change-Id: I18a94851cd139951c2987054c22f01809d2479b3
2024-02-11gnu: r-rcas: Update to 1.28.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rcas): Update to 1.28.3. [propagated-inputs]: Remove r-ggseqlogo and pandoc; add r-seqlogo. Change-Id: I8be7d8fc4278c8ec2db6932935f70292a4f47049
2024-02-11gnu: r-genomeinfodb: Update to 1.38.6.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.6. Change-Id: I57a53d4a73e9b4ce36d97092dab0789d6509484f
2024-02-11gnu: r-dittoseq: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.14.2. Change-Id: I8930f72b47ff92b3b798d9a45fc0598bec1ba53e
2024-02-11gnu: r-bsgenome: Update to 1.70.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.70.2. Change-Id: I45ba28279e0b843bcd635c2e30fb696e85195ce7
2024-02-11gnu: r-animalcules: Update to 1.18.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.18.3. Change-Id: I4f8d5897af796afbce269748c6a5676db72e4baf
2024-02-11gnu: r-curatedtcgadata: Update to 1.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.24.1. Change-Id: I42ae64544b53d6ddd72b948af4093ef4dd31a9c6
2024-02-11gnu: r-rhdf5lib: Update to 1.24.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.24.2. [propagated-inputs]: Remove r-biocstyle and r-stringr. [native-inputs]: Remove r-rmarkdown. Change-Id: I76b1601397bc69651c0b788404c6b0c67d830830
2024-02-10gnu: r-nmf: Update to 0.27.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.27. Change-Id: I85f44258abaaceeef6d20e3b3f29512560f5efbb
2024-02-01gnu: r-tximeta: Update to 1.20.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.3. Change-Id: I0438d403e659f361e5bb3d24ccedd301ec5d59d5
2024-02-01gnu: r-basilisk: Update to 1.14.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.3. Change-Id: I605e5a1df4047a17b631398f0db6ccdfea1638ce
2024-02-01gnu: r-genomicfeatures: Update to 1.54.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.54.3. Change-Id: I8c503aa209692357a7830b618f6dd0ac86b5e65c
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