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2021-10-15gnu: libhx: Update to 4.1.Guillaume Le Vaillant
* gnu/packages/patches/libhx-fix-double-free-bug.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/c.scm (libhx): Update to 4.1. [source]: Remove patch.
2021-10-13gnu: ganeti: Prepare for Sphinx 4.0.Marius Bakke
* gnu/packages/patches/ganeti-sphinx-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/virtualization.scm (ganeti)[source](patches): Add it.
2021-10-13gnu: libhx: Fix runtime bug.Guillaume Le Vaillant
There is a bug in libhx causing pam-mount to crash when trying to mount user directories at login. Upstream has a patch to fix this issue. * gnu/packages/patches/libhx-fix-double-free-bug.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/c.scm (libhx)[source]: Use it.
2021-10-13gnu: cpufrequtils: Update to 008.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (cpufrequtils): Update to 008. [source]: Remove patch. [arguments]: Add many #:configure-flags to mitigate downgrade from Autotools. Don't ./configure. [native-inputs]: Remove unused sysfsutils-1. Add gettext-minimal. [home-page]: Change to a working mirror. * gnu/packages/patches/cpufrequtils-fix-aclocal.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-10-12gnu: QEMU: Remove obsolete patch.Marius Bakke
* gnu/packages/virtualization.scm (qemu)[source](patches): Remove Sphinx compatibility patch, which worked around a bug in Sphinx that has since been fixed. * gnu/packages/patches/qemu-sphinx-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-10-12gnu: QEMU: Update to 6.1.0.Marius Bakke
* gnu/packages/virtualization.scm (qemu): Update to 6.1.0. [source](patches): Remove obsolete patch. [arguments]: Adjust substitutions for upstream changes. [native-inputs]: Add PYTHON-SPHINX-RTD-THEME. * gnu/packages/patches/qemu-meson-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-10-11gnu: ganeti: Adjust to GHC 8.10 / Stackage 18.10.Marius Bakke
* gnu/packages/patches/ganeti-haskell-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/virtualization.scm (ganeti)[source](patches): Add it. [arguments]: Add phase patch-version-constraints.
2021-10-11gnu: ganeti: Update to 3.0.1.Marius Bakke
* gnu/packages/virtualization.scm (ganeti): Update to 3.0.1. [source](patches): Remove obsolete. * gnu/tests/ganeti.scm (%ganeti-os): Adjust network configuration so QEMU port forwarding can work. (run-ganeti-test): Remove unused port mapping. Adjust and enable previously failing test. * gnu/packages/patches/ganeti-deterministic-manual.patch, gnu/packages/patches/ganeti-drbd-compat.patch, gnu/packages/patches/ganeti-os-disk-size.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-10-11gnu: Add platform support.Mathieu Othacehe
* gnu/platform.scm: New file. * gnu/platforms/arm.scm: Ditto. * gnu/platforms/hurd.scm: Ditto. * gnu/local.mk (GNU_SYSTEM_MODULES): Add them. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-10-09home: services: configuration: Support file-like objects.Oleg Pykhalov
* gnu/home/services/configuration.scm (interpose): Operate only with file-like objects. (string-or-gexp?): Delete procedure. (serialize-string-or-gexp): Rename to 'serialize-file-like'. (text-config?): Call 'file-like' intead of 'string-or-gexp?'. * guix/scripts/home/import.scm: (generate-bash-module+configuration): Don't call slurp-file-gexp. * gnu/home/services/configuration.scm: Move content ... * gnu/services/configuration.scm: here. * gnu/home/services/shells.scm: Delete (gnu home services configuration). * gnu/home/services/xdg.scm: Same. * gnu/local.mk: Same. * tests/guix-home.sh: Test home-bash-service-type and extension with home-bash-extension.
2021-10-09Move (gnu home-services) to (gnu home services).Oleg Pykhalov
* gnu/home-services.scm (%guix-home-root-directory): Replace gnu/home-services.scm with "gnu/home/services.scm". Rename to gnu/home/services.scm. * gnu/local.mk (GNU_SYSTEM_MODULES): Rename gnu/home-services.scm to gnu/home/services.scm. * doc/he-config-bare-bones.scm: Replace (gnu home-services) with (gnu home services). * gnu/home.scm: Same. * gnu/home/services/fontutils.scm: Same. * gnu/home/services/mcron.scm: Same. * gnu/home/services/shells.scm: Same. * gnu/home/services/shepherd.scm: Same. * gnu/home/services/symlink-manager.scm: Same. * gnu/home/services/xdg.scm: Same. * guix/scripts/home.scm: Same. * guix/self.scm: Same.
2021-10-09gnu: clang@11, clang@12: Do not refer to /lib on foreign distros.Ludovic Courtès
Partly fixes <https://issues.guix.gnu.org/51088>. * gnu/packages/patches/clang-11.0-libc-search-path.patch: Update. * gnu/packages/patches/clang-12.0-libc-search-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/llvm.scm (clang-12): Use it.
2021-10-09gnu: clang@7, clang@8: Do not refer to /lib on foreign distros.Ludovic Courtès
Partly fixes <https://issues.guix.gnu.org/51088>. * gnu/packages/patches/clang-7.0-libc-search-path.patch: Update. * gnu/packages/patches/clang-8.0-libc-search-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/llvm.scm (clang-8): Use it.
2021-10-08gnu: Move (gnu home-services) to (gnu home services).Oleg Pykhalov
* gnu/home-services/configuration.scm: Move the content ... * gnu/home/services/configuration.scm: ... here. * doc/guix.texi: Replace (gnu home-services mcron) with (gnu home services mcron). Replace (gnu home-services) with (gnu home services). * gnu/home.scm: Replace (gnu home-services fontutils) with (gnu services fontutils). Replace (gnu home-services shells) with (gnu home services shells). Replace (gnu home-services symlink-manager) with (gnu home services symlink-manager). Replace (gnu home-services xdg) with (gnu home services xdg). * gnu/home-services/fontutils.scm: Rename to gnu/services/fontutils.scm. * gnu/home-services/mcron.scm: Move to gnu/home/services/mcron.scm. Replace (gnu home-services shepherd) with (gnu home services shepherd). * gnu/home-services.scm (%service-type-path): Search home services in "gnu/services". * gnu/home-services/shells.scm: Replace (gnu home-services configuration) with (gnu home services configuration). Rename to gnu/home/services/shells.scm. Replace (gnu home-services utils) with (gnu home services utils). * gnu/home-services/shepherd.scm: Move to gnu/home/services/shepherd.scm. * gnu/home-services/symlink-manager.scm: Rename to gnu/home/services/symlink-manager.scm. * gnu/home-services/utils.scm: Rename to gnu/home/services/utils.scm. * gnu/home-services/xdg.scm: Rename to gnu/home/services/xdg.scm. * guix/scripts/home/import.scm: Replace (gnu home-services bash) with (gnu home services bash). * gnu/home-services.scm: Update documentation string. * doc/he-config-bare-bones.scm: Apply new (gnu home-services ...) modules location. * gnu/local.mk (GNU_SYSTEM_MODULES): Same.
2021-10-08gnu: pigx-scrnaseq: Remove dependency on pandoc-citeproc.Lars-Dominik Braun
* gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/bioinformatics.scm (pigx-scrnaseq)[source]: Use it. [native-inputs]: Add automake/autoconf.
2021-10-08gnu: pigx-rnaseq: Remove dependency on pandoc-citeproc.Lars-Dominik Braun
* gnu/packages/patches/pigx-rnaseq-no-citeproc.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/bioinformatics.scm (pigx-rnaseq)[source]: Use it. [native-inputs]: Add automake/autoconf.
2021-10-08gnu: pigx-chipseq: Remove dependency on pandoc-citeproc.Lars-Dominik Braun
* gnu/packages/patches/pigx-chipseq-no-citeproc.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/bioinformatics.scm (pigx-chipseq)[source]: Use it. [native-inputs]: Add automake/autoconf.
2021-10-08gnu: pigx-sars-cov2-ww: Remove dependency on pandoc-citeproc.Lars-Dominik Braun
* gnu/packages/patches/pigx-sars-cov2-ww-no-citeproc.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/bioinformatics.scm (pigx-sars-cov2-ww)[source]: Use it. [native-inputs]: Add automake/autoconf.
2021-10-08gnu: pigx-bsseq: Remove dependency on pandoc-citeproc.Lars-Dominik Braun
* gnu/packages/patches/pigx-bsseq-no-citeproc.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/bioinformatics.scm (pigx-bsseq)[source]: Use it. [native-inputs]: Add automake/autoconf.
2021-10-08gnu: ngless: Fix build.Lars-Dominik Braun
Apply upstream patch to restore compatibility with current Stackage. * gnu/packages/patches/ngless-unliftio.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/bioinformatics.scm (ngless): Use it.
2021-10-08gnu: idris: Fix build.Xinglu Chen
Backport some commits from upstream. * gnu/packages/patches/idris-build-with-haskeline-0.8.patch: * gnu/packages/patches/idris-build-with-megaparsec-9.patch: New patches * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/idris.scm (idris): Use them. Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
2021-10-08gnu: hedgewars: Fix build.Lars-Dominik Braun
* gnu/packages/patches/hedgewars-network-bsd.patch: Import upstream patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/games.scm (hedgewars): Use it.
2021-10-08gnu: cabal-install: Build with GHC 8.10.Lars-Dominik Braun
* gnu/packages/patches/cabal-install-base16-bytestring1.0.patch: New patch. * gnu/packages/patches/cabal-install-ghc8.10.patch: Ditto. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/haskell-apps.scm (cabal-install) [source]: Use them.
2021-10-08gnu: Update Haskell ecosystem.Lars-Dominik Braun
Bump packages’ versions to the lastest Stackage or Hackage release. Since packages are interdependent, do so in a single commit. 525 packages have been updated. These packages have been removed, because they fail to build, have no newer version available and no dependencies: corrode ghc-easytest ghc-edisonapi ghc-edisoncore ghc-pandoc-types ghc-regex-tdfa-text These have been removed, because they are no longer required: ghc-happy-1.19.9 ghc-prettyprinter-1.6 ghc-protolude-0.3 ghc-pandoc-citeproc and pandoc-citeproc have been removed, because pandoc does not use them any more. Co-authored-by: Xinglu Chen <public@yoctocell.xyz>
2021-10-08gnu: ocaml-cairo2: Update to 0.6.2.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml-cairo2): Update to 0.6.2. * gnu/packages/patches/ocaml-cairo2-caml_ba_array-fix.patch: Remove file. * gnu/local.scm (dist_patch_DATA): Remove it.
2021-10-08gnu: ceph: Fix breaking change in snappy.Greg Hogan
* gnu/packages/storage.scm (ceph)[source]: Add patch. * gnu/packages/patches/ceph-fix-snappy-breaking-change.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Marius Bakke <marius@gnu.org>
2021-10-05gnu: php: Patch failing test case.Ryan Sundberg via Guix-patches via
Fixes a failing test case in PHP (Zend/tests/bug74093.phpt). See <https://github.com/php/php-src/pull/7555/files> for upstream status. * gnu/packages/php.scm (php)[source]: Add patch. * gnu/packages/patches/php-bug-74093-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-10-04gnu: diffoscope: Update to 186.Tobias Geerinckx-Rice
* gnu/packages/diffoscope.scm (diffoscope): Update to 186. [source]: Add patch. [arguments]: Add a new 'fix-failing-tests phase. Don't explicitly return #t from phases. * gnu/packages/patches/diffoscope-fix-test_item3_deflate_llvm_bitcode.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-10-04gnu: libcacard: Update to 2.8.1.Tobias Geerinckx-Rice
* gnu/packages/spice.scm (libcacard): Update to 2.8.1. [source]: Remove patch. * gnu/packages/patches/libcacard-unknown-variable.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-10-03gnu: hexchat: Update to 2.16.0.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (hexchat): Update to 2.16.0. [source]: Remove patch. [inputs]: Remove libnotify and libproxy. Upgrade python-2 to python@3. Add python-cffi and bash-minimal. [arguments]: Don't explicitly return #t from phases. Add a new 'wrap-program phase.
2021-10-03gnu: ccache: Update to 4.4.2.Tobias Geerinckx-Rice
* gnu/packages/ccache.scm (ccache): Update to 4.4.2. [source]: Remove patch. [arguments]: Substitute nonexistent compgen. * gnu/packages/patches/ccache-fix-basedir-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-09-28gnu: sbcl-burgled-batteries3: Fix compiling with sbcl >= 2.1.6.Guillaume Le Vaillant
* gnu/packages/patches/sbcl-burgled-batteries3-fix-signals.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/lisp-xyz.scm (sbcl-burgled-batteries3)[source]: Use it.
2021-09-28gnu: sbcl-png: Fix compiling with sbcl >= 2.1.6.Guillaume Le Vaillant
* gnu/packages/patches/sbcl-png-fix-sbcl-compatibility.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/lisp-xyz.scm (sbcl-png)[source]: Use it.
2021-09-28gnu: ccache: Update to 4.4.1.Tobias Geerinckx-Rice
* gnu/packages/ccache.scm (ccache): Update to 4.4.1. [source]: Add patch. [arguments]: Remove explicit #t return values from phases. * gnu/packages/patches/ccache-fix-basedir-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-09-27Merge branch 'wip-guix-home'Oleg Pykhalov
2021-09-26gnu: Add patool.Maxim Cournoyer
* gnu/packages/patool.scm: New module. * gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2021-09-25gnu: Add xgboost.Vinicius Monego
* gnu/packages/machine-learning.scm (xgboost): New variable. * gnu/packages/patches/xgboost-use-system-dmlc-core.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-24gnu: Add NNPACK.Ludovic Courtès
* gnu/packages/machine-learning.scm (nnpack): New variable. * gnu/packages/patches/nnpack-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-09-23gnu: ungoogled-chromium: Update to 93.0.4577.82-0.3f62dbc.Marius Bakke
* gnu/packages/patches/ungoogled-chromium-ffmpeg-compat.patch, gnu/packages/patches/ungoogled-chromium-system-nspr.patch: New files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for version 93. (%chromium-version): Set to 93.0.4577.82. (%ungoogled-revision): Set to 93.0.4577.82-1-2-g3f62dbc. (%debian-patches): Remove 'system/nspr.patch'. (%ungoogled-origin): Update source hash. (%guix-patches): Add 'ungoogled-chromium-ffmpeg-compat.patch' and 'ungoogled-chromium-system-nspr.patch'. (ungoogled-chromium-snippet): Remove PYTHON-2 usage. Don't unbundle 'snappy'. (libvpx/chromium): Remove variable. (ungoogled-chromium)[source]: Update hash. [arguments]: Add "is_cfi=false", "use_thin_lto=false", and "blink_enable_generated_code_formatting=false". [native-inputs]: Change CLANG-11 to CLANG-12. Change NODE to NODE-LTS. Add PYTHON-BEAUTIFULSOUP4 and PYTHON-HTML5LIB. Remove PYTHON-2. [inputs]: Change LIBVPX/CHROMIUM to LIBVPX.
2021-09-23gnu: LLVM, Clang: Update to 12.0.1.Marius Bakke
* gnu/packages/patches/clang-12-tools-extra-directory.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/llvm.scm (llvm-12, clang-runtime-12): Update to 12.0.1. (clang-12): Likewise. Remove obsolete patch.
2021-09-21gnu: ntfs-3g: Update to 2021.8.22 [security fixes].Leo Famulari
The upstream security advisory is named NTFS3G-SA-2021-0001. Fixes CVE-2021-33285, CVE-2021-35269, CVE-2021-35268, CVE-2021-33289, CVE-2021-33286, CVE-2021-35266, CVE-2021-33287, CVE-2021-35267, CVE-2021-39251, CVE-2021-39252, CVE-2021-39253, CVE-2021-39254, CVE-2021-39255, CVE-2021-39256, CVE-2021-39257, CVE-2021-39258, CVE-2021-39259, CVE-2021-39260, CVE-2021-39261, CVE-2021-39262, CVE-2021-39263. For more information: https://seclists.org/oss-sec/2021/q3/139 * gnu/packages/linux.scm (ntfs-3g): Update to 2021.8.22. [source]: Remove obsolete patch. * gnu/packages/patches/ntfs-3g-CVE-2019-9755.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-09-21gnu: patchutils: Update to 0.4.2.Xinglu Chen
* gnu/packages/patchutils.scm (patchutils): Update to 0.4.2. [source]: Remove patch. [inputs]: Add ‘python’. [arguments]<#:phases>: Remove trailing #t. * gnu/local.mk (dist_patch_DATA): Remove patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-13home-services: Add Mcron.Andrew Tropin
* gnu/home-services/mcron.scm: New file. * gnu/local.mk: Add this. * doc/guix.texi: Add documentation about Mcron Home Service. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2021-09-10gnu: racket: fix `raco exe` with non-minimal RacketPhilip McGrath
This commit backports an upstream repair for a bug exposed by Guix's change in Racket 8.2 to make the `racket` package a layered/tethered installation that chains to the `racket-minimal` package. When using a layered/tethered installation, the `setup/variant` library would fail to recognize the default Racet variant (CS, 3M, or CGC), leading to confusing failures from `raco exe`, `create-embedding-executable`, and other clients. For further details, see <https://issues.guix.gnu.org/50118> and <https://github.com/racket/racket/issues/3969>. * gnu/packages/patches/racket-minimal-backport-1629887.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/racket.scm (racket-minimal)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-09gnu: go-github-com-urfave-cli-v2: Fix tests when building with Go 1.17.Sarah Morgensen
* gnu/packages/patches/go-github-com-urfave-cli-v2-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/golang.scm (go-github-com-urfave-cli-v2)[origin]: Apply it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-09gnu: go-github-com-urfave-cli: Fix tests when building with Go 1.17.Sarah Morgensen
* gnu/packages/patches/go-github-com-urfave-cli-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/golang.scm (go-github-com-urfave-cli)[origin]: Apply it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-09gnu: mailutils: Update to 3.13.Maxim Cournoyer
* gnu/packages/patches/mailutils-fix-uninitialized-variable.patch: Remove patch. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/mail.scm (mailutils): Update to 3.13. Remove the 2013 --with-sql option TODO comment; if someone needs that, they can send a patch. [source]: Remove above patch. [phases]{prepare-test-suite}: Also patch shell shebang in 'libmailutils/tests/lock.at' and 'imap4d/tests/testclient.c'. [parallel-tests?]: Reinstate parallel tests. [inputs]: Move m4 to... [native-inputs]: ... here. Add the autoconf, automake, gettext and libtool quartet.
2021-09-09home-services: Add Shepherd.Andrew Tropin
* gnu/home-services/shepherd.scm: New file. * gnu/local.mk: Add this. * doc/guix.texi: Add documentation about Shepherd Home Service. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2021-09-09gnu: local.mk: Tabify.Oleg Pykhalov
* gnu/local.mk (GNU_SYSTEM_MODULES): Normalize to tabs.
2021-09-09home-services: Add utils module.Andrew Tropin
* gnu/home-services/utils.scm (maybe-object->string object->snake-case-string) (object->snake-case-string): New variables. * gnu/local.mk (GNU_SYSTEM_MODULES): Add home-services/utils.scm. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
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