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2016-07-28Merge branch 'master' into core-updatesMark H Weaver
2016-07-28gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].Mark H Weaver
* gnu/packages/patches/gd-CVE-2016-5766.patch, gnu/packages/patches/gd-CVE-2016-6128.patch, gnu/packages/patches/gd-CVE-2016-6132.patch, gnu/packages/patches/gd-CVE-2016-6214.patch, gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files. * gnu/packages/patches/gd-fix-tests-on-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/gd.scm (gd): Update to 2.2.3. [source]: Update patches field accordingly.
2016-07-28gnu: dico: Patch 'idxgcide' bug.Ludovic Courtès
* gnu/packages/patches/dico-idxgcide-bug.patch: New file. * gnu/packages/dico.scm (dico)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2016-07-28Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2016-07-28gnu: mysql: Update to 5.7.13 [fixes CVE-2016-{3477,3521,3615,5440}].Leo Famulari
* gnu/packages/patches/mysql-fix-failing-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/databases.scm (mysql): Update to 5.7.13.
2016-07-25Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2016-07-24gnu: openssh: Fix CVE-2016-6210.Efraim Flashner
* gnu/packages/ssh.scm (openssh)[source]: Add patches openssh-CVE-2016-6210-1.patch, openssh-CVE-2016-6210-2.patch, openssh-CVE-2016-6210-3.patch. * gnu/packages/patches/openssh-CVE-2016-6210-1.patch: New file. * gnu/packages/patches/openssh-CVE-2016-6210-2.patch: New file. * gnu/packages/patches/openssh-CVE-2016-6210-3.patch: New file. * gnu/local.mk (dist_patch_DATA): Register them.
2016-07-22Merge branch 'master' into core-updatesLeo Famulari
Resolved conflicts: * gnu/packages/scheme.scm: Conflict in import of (guix licenses). On master, "#:hide (openssl)" was used. On core-updates, "#:select (some licenses)" was used. The latter won the conflict. * gnu/packages/version-control.scm (git)[arguments]: Whitespace conflict in 'install-shell-completion.
2016-07-21gnu: Add hexedit.Kei Kebreau
* gnu/packages/hexedit: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-07-20Merge branch 'master' into core-updatesLudovic Courtès
2016-07-18gnu: llvm: Update to 3.8.1.Eric Bavier
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 3.8.1. (llvm-3.7, clang-runtime-3.7, clang-3.7): New variables. (clang-runtime-from-llvm)[arguments]: Disable tests, which were not being run for previous versions anyhow but now fail hard. (clang-from-llvm): Add #:patches keyword argument. * gnu/packages/patches/clang-3.8-libc-search-path.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Dennis Mungai <dmngaie@gmail.scm>
2016-07-18Revert "gnu: gnutls: Fix test failure."Leo Famulari
This reverts commit 1d14bf9f5ff43ff9097f1c5e1e2d37528eb74971.
2016-07-18gnu: gd: Fix failing test on i686.Mark H Weaver
* gnu/packages/patches/gd-fix-test-on-i686.patch: New file. * gnu/local.mk (dist_PATCH_DATA): Add it. * gnu/packages/gd.scm (gd)[source]: Add the patch.
2016-07-18gnu: gnutls: Fix test failure.Leo Famulari
* gnu/packages/patches/gnutls-fix-stale-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tls.scm (gnutls)[replacement]: New field. (gnutls/fixed): New variable.
2016-07-16gnu: gd: Fix CVE-2016-{5766,6128,6132,6214}.Leo Famulari
* gnu/packages/patches/gd-CVE-2016-5766.patch, gnu/packages/patches/gd-CVE-2016-6128.patch, gnu/packages/patches/gd-CVE-2016-6132.patch, gnu/packages/patches/gd-CVE-2016-6214.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gd.scm (gd): Use patches.
2016-07-15gnu: lsh: Move to (gnu packages ssh)David Craven
* gnu/packages/lsh.scm: Remove. Move 'lsh and liboop' to... * gnu/packages/ssh.scm (liboop, lsh): ... here. New variables. * gnu/services/ssh.scm, gnu/services/base.scm: Adjust accordingly. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-10gnu: libmtp: Update to 1.1.11.Ricardo Wurmus
* gnu/packages/patches/libmtp-devices.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove patch. * gnu/packages/libusb.scm (libmtp): Update to 1.1.11.
2016-07-09gnu: Add python-dendropy.Ben Woodcroft
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New variables. * gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-07-06gnu: sudo: Update to 1.8.17p1.Efraim Flashner
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1. [source]: Remove patch. * gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-03gnu: openimageio: Update to 1.6.15.Efraim Flashner
* gnu/packages/graphics.scm (openimageio): Update to 1.6.15. [source]: Remove patch. * gnu/packages/patches/openimageio-boost-1.60.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-02gnu: gimp: Fix CVE-2016-4994.Leo Famulari
* gnu/packages/patches/gimp-CVE-2016-4994.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gimp.scm (gimp): Use it.
2016-06-29gnu: avrdude: Use libusb-compat.Ricardo Wurmus
* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch. [inputs]: Replace "libusb" with "libusb-compat".
2016-06-27gnu: Add Go 1.4.Matthew Jordan
* gnu/local.mk: Modified file. * gnu/packages/golang.scm: New file. Co-authored-by: Efraim Flashner <efraim@flashner.co.il> Co-authored-by: Andy Wingo <wingo@igalia.com> Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-27gnu: Add khmer.Ben Woodcroft
* gnu/packages/bioinformatics.scm (khmer): New variable. * gnu/packages/patches/khmer-use-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-06-27Merge branch 'master' into core-updatesLudovic Courtès
2016-06-24gnu: Add erlang.Steve Sprang
* gnu/packages/erlang.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Co-authored by: Leo Famulari <leo@famulari.name> Co-authored by: Pjotr Prins <pjotr.public12@thebird.nl>
2016-06-22services: Add 'mcron-service'.Ludovic Courtès
* gnu/services/mcron.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/tests/base.scm (%mcron-os, %test-mcron): New variables. (run-mcron-test): New procedure. * doc/guix.texi (Scheduled Job Execution): New node.
2016-06-22gnu: lightning: Move to (gnu packages assembly).Alex Kost
* gnu/packages/lightning.scm: Remove. Move 'lightning' to... * gnu/packages/assembly.scm (lightning): ... here. New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2016-06-22gnu: beets: Update to 1.3.18.Leo Famulari
* gnu/packages/patches/beets-image-test-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (beets): Update to 1.3.18. [source]: Use patch.
2016-06-21gnu: nasm: Make build bit-reproducible.Jan Nieuwenhuizen
* gnu/packages/patches/nasm-no-ps-pdf.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/assembly.scm (nasm): Use it. Remove ghostscript, do not build PS or PDF docs. Makes build bit-reproducible. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-06-21gnu: Add ruby-puma.Ben Woodcroft
gnu/packages/ruby.scm (ruby-puma): New variable. gnu/packages/patches/ruby-puma-ignore-broken-test.patch: New file. gnu/local.mk (dist_patch_DATA): Add it.
2016-06-21gnu: yasm: Move to (gnu packages assembly).Ludovic Courtès
* gnu/packages/yasm.scm: Remove. Move 'yasm' to... * gnu/packages/assembly.scm (yasm): ... here. New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2016-06-21gnu: Add nasm.Jan Nieuwenhuizen
* gnu/packages/assembly.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-20tests: Add system installation test.Ludovic Courtès
* gnu/tests.scm (define-os-with-source): New macro. * gnu/tests/install.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * build-aux/run-system-tests.scm (%system-tests): Likewise.
2016-06-17Merge branch 'master' into core-updatesLudovic Courtès
2016-06-16gnu: Add awesome.Carlo Zancanaro
* gnu/packages/wm.scm (awesome): New variable. * gnu/packages/patches/awesome-reproducible-png.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-15gnu: Add gnome-maps.Leo Famulari
* gnu/packages/geo.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-06-15gnu: openssl: Fix CVE-2016-2177 and CVE-2016-2178.Leo Famulari
* gnu/packages/patches/openssl-CVE-2016-2177.patch, gnu/packages/patches/openssl-CVE-2016-2178.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/tls.scm (openssl/fixed): Use them.
2016-06-15gnu: Add log4cpp.Ricardo Wurmus
* gnu/packages/logging.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-06-15gnu: Add teensy-loader-cli.Hartmut Goebel
* gnu/packages/flashing-tools.scm (teensy-loader-cli): New variable. * gnu/packages/patches/teensy-loader-cli-help.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-15gnu: grue-hunter: Move to (gnu packages games).Ludovic Courtès
* gnu/packages/grue-hunter.scm: Remove. Move contents to... * gnu/packages/games.scm (grue-hunter): ... here. New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2016-06-14gnu: mit-krb5: Update to 1.14.2.Ludovic Courtès
* gnu/packages/mit-krb5.scm (mit-krb5): Update to 1.14.2. [source]: Remove 'patches'. * gnu/packages/patches/mit-krb5-CVE-2015-8629.patch, gnu/packages/patches/mit-krb5-CVE-2015-8630.patch, gnu/packages/patches/mit-krb5-CVE-2015-8631.patch, gnu/packages/patches/mit-krb5-init-context-null-spnego.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2016-06-14gnu: automake: Adjust test to ignore new gzip warnings.Ludovic Courtès
* gnu/packages/patches/automake-test-gzip-warning.patch: New file. * gnu/packages/autotools.scm (automake)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2016-06-13build: Update list of libxslt patches.Ludovic Courtès
* gnu/local.mk (dist_patch_DATA): Remove libxslt-CVE-2015-7995.patch, unneeded since 28b33172c9d67795e3ac641f9230b99905c90664. Re-add libxslt-generated-ids.patch.
2016-06-12Merge branch 'master' into core-updatesLeo Famulari
2016-06-10gnu: expat: Fix CVE-2012-6702 and CVE-2016-5300.Leo Famulari
* gnu/packages/patches/expat-CVE-2012-6702-and-CVE-2016-5300.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xml.scm (expat/fixed): Use it.
2016-06-10gnu: higan: Various improvements.Taylan Ulrich Bayırlı/Kammer
* gnu/packages/games.scm (higan): Use semi-official repository at GitLab (using hotfix tag 098b which is equivalent to official release 098). Add a patch to remove the build flag -march=native. Set profile to balanced. * gnu/packages/patches/higan-remove-march-native-flag.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-06-08Revert "gnu: libxml2: Add fix for CVE-2016-1762."Mark H Weaver
This reverts commit 6e4f18cfdd1bf747e77f81b64497f1c05f57a057.
2016-06-08gnu: libxml2: Add fix for CVE-2016-1762.Mark H Weaver
* gnu/packages/patches/libxml2-CVE-2016-1762.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xml.scm (libxml2/fixed)[source]: Add patch.
2016-06-08gnu: icecat: Add fixes for CVE-2016-{2818,2819,2821,2824,2828,2831}.Mark H Weaver
* gnu/packages/patches/icecat-CVE-2016-2818-pt1.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt2.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt3.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt4.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt5.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt6.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt7.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt8.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt9.patch, gnu/packages/patches/icecat-CVE-2016-2819.patch, gnu/packages/patches/icecat-CVE-2016-2821.patch, gnu/packages/patches/icecat-CVE-2016-2824.patch, gnu/packages/patches/icecat-CVE-2016-2828.patch, gnu/packages/patches/icecat-CVE-2016-2831.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.