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2021-02-11gnu: diffoscope: Update to 166.Vagrant Cascadian
* gnu/packages/diffoscope.scm (diffoscope): Update to 166. [source]: Add patch to use magic.open compatibility interface. * gnu/packages/patches/diffoscope-revert-to-magic-open.patch: New file. * gnu/local.mk [dist_patch_DATA]: New patch.
2021-02-11gnu: opam: Update to 2.0.8.Julien Lepiller
* gnu/packages/ocaml.scm (opam): Update to 2.0.8.
2021-02-11gnu: emacs-marginalia: Update to 0.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.3.
2021-02-11gnu: emacs-consult: Update to 0.5.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.5.
2021-02-11gnu: bowtie1: Update to 1.3.0.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.0. [arguments]: Set CC in make flags. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-02-11doc: Try to improve the branching workflow.Leo Famulari
* doc/contributing.texi (Submitting Patches): Introduce the use of "-frozen" branch names.
2021-02-11gnu: r-gage: Update to 2.40.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.40.1.
2021-02-11gnu: r-msnbase: Update to 2.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.1.
2021-02-11gnu: r-methylkit: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.16.1.
2021-02-11gnu: r-delayedarray: Update to 0.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.16.1.
2021-02-11gnu: r-biomart: Update to 2.46.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.46.3.
2021-02-11gnu: r-edger: Update to 3.32.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.32.1.
2021-02-11gnu: r-iranges: Update to 2.24.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.24.1.
2021-02-11gnu: r-s4vectors: Update to 0.28.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.1.
2021-02-11gnu: r-systempiper: Update to 1.24.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.3.
2021-02-11gnu: r-gseabase: Update to 1.52.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.1.
2021-02-11gnu: r-genefilter: Update to 1.72.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.1.
2021-02-11gnu: r-delayedmatrixstats: Update to 1.12.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.3.
2021-02-11gnu: r-sparsematrixstats: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.2.1.
2021-02-11gnu: r-scran: Update to 1.18.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.5.
2021-02-11gnu: r-scuttle: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.0.4.
2021-02-11gnu: r-beachmat: Update to 2.6.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.4.
2021-02-11gnu: r-rhdf5lib: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.1.
2021-02-11gnu: r-hdf5array: Update to 1.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.1.
2021-02-11gnu: r-preprocesscore: Update to 1.52.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.1.
2021-02-11gnu: r-chemminer: Update to 3.42.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.1.
2021-02-11gnu: r-gdsfmt: Update to 1.26.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.1.
2021-02-11gnu: r-cytolib: Update to 2.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.1.
2021-02-11gnu: r-multidataset: Update to 1.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.1.
2021-02-11gnu: r-clusterprofiler: Update to 3.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.1.
2021-02-11gnu: r-enrichplot: Update to 1.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.2.
2021-02-11gnu: r-matrixgenerics: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.2.1.
2021-02-11gnu: r-diffbind: Update to 3.0.13.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.13.
2021-02-11gnu: OpenLDAP: Update to 2.4.57 [security fixes].Leo Famulari
Fixes CVE-2020-{36221,36222,36223,36224,36225,36226,36226,36228,36229,36230}. * gnu/packages/openldap.scm (openldap-2.4.57): New variable. (openldap)[replacement]: New field.
2021-02-11gnu: Add wob.Nicolas Goaziou
* gnu/packages/xdisorg.scm (wob): New variable.
2021-02-11gnu: Add gammastep.Nicolas Goaziou
* gnu/packages/xdisorg.scm (gammastep): New variable.
2021-02-11gnu: Add font-cozette.Julien Lepiller
* gnu/packages/fonts.scm (font-cozette): New variable.
2021-02-11gnu: Add python-crayons.Julien Lepiller
* gnu/packages/python-xyz.scm (python-crayons): New variable.
2021-02-11gnu: grammalecte: Update to 2.1.0.Nicolas Goaziou
* gnu/packages/dictionaries.scm (grammalecte): Update to 2.1.0.
2021-02-11gnu: python-dropbox: Update to 11.2.0.Efraim Flashner
* gnu/packages/file-systems.scm (python-dropbox): Update to 11.2.0.
2021-02-11gnu: dbxfs: Update to 1.0.51.Efraim Flashner
* gnu/packages/file-systems.scm (dbxfs): Update to 1.0.51.
2021-02-11gnu: texmacs: Update to 1.99.18.Nicolas Goaziou
* gnu/packages/text-editors.scm (texmacs): Update to 1.99.18.
2021-02-11gnu: lyx: Update to 2.3.6.1.Nicolas Goaziou
* gnu/packages/tex.scm (lyx): Update to 2.3.6.1.
2021-02-11gnu: python-duniterpy: Update to 0.61.0.Nicolas Goaziou
* gnu/packages/finance.scm (python-duniterpy): Update to 0.61.0.
2021-02-11gnu: musescore: Update to 3.6.2.Nicolas Goaziou
* gnu/packages/music.scm (musescore): Update to 3.6.2.
2021-02-11gnu: emacs-ebdb: Update to 0.6.22.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.6.22.
2021-02-11gnu: visidata: Update to 2.2.1.Ryan Prior
* gnu/packages/visidata.scm (visidata): Update to 2.2.1. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-11gnu: esbuild: Update to 0.8.43.Ryan Prior
* gnu/packages/web.scm (esbuild): Update to 0.8.43. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-02-11gnu: emacs-ztree: Update to 20210210.Pierre Neidhardt
* gnu/packages/emacs-xyz.scm (emacs-ztree): Update to 20210210.
2021-02-11gnu: Add tiramisu.Stefan Reichör
* gnu/packages/gnome-xyz.scm (tiramisu): New variable. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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