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2021-04-14Revert "services: mysql: Add extra-environment as configuration option."Leo Prikler
This reverts commit f3626119d738f30b5ab59e76c105fd7b4c077ddc. This commit inadvertently broke a string freeze. Let's be nice to our translators and not do that.
2021-04-13gnu: guile-git: Update to 0.5.0.Ludovic Courtès
* gnu/packages/guile.scm (guile-git): Update to 0.5.0.
2021-04-13gnu: emacs-git-link: Update to 0.8.3.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-git-link): Update to 0.8.3. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-13gnu: le-certs: Update to new Let's Encrypt certificates.Leo Famulari
* gnu/packages/certs.scm (le-certs): Update the certificate store. [inputs]: Add isrgrootx2.pem, letsencryptauthorityr3.pem, letsencryptauthorityr4.pem, letsencryptauthoritye1.pem, and letsencryptauthoritye2.pem. Remove letsencryptauthorityx3.pem and letsencryptauthorityx4.pem. [arguments]: Adjust the builder accordingly.
2021-04-13tests: postgresql: Fix it.Mathieu Othacehe
This is a follow-up of c311147bd16aa0e5746d9cbf31502f5fd61e470c. * gnu/tests/databases.scm (run-postgresql-test): Use "/tmp" as database host.
2021-04-13services: postgresql: Use "/tmp" host directory.Mathieu Othacehe
This is a follow-up of c311147bd16aa0e5746d9cbf31502f5fd61e470c. * gnu/services/databases.scm (<postgresql-role-configuration>)[host]: Set to "/tmp" which the default Postgresql socket directory.
2021-04-13services: mysql: Add extra-environment as configuration option.methuselah-0
* gnu/services/databases.scm (mysql-configuration): Add extra-environment (mysql-service): Use #:log-file and #:environment-variables * doc/guix.texi: Document it. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-13gnu: Add r-randomforestsrc.Peter Lo
* gnu/packages/cran.scm (r-randomforestsrc): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-04-13nls: Add Slovak translation.Julien Lepiller
* po/guix/LINGUAS: Add 'sk'. * po/guix/sk.po: New file.
2021-04-13gnu: openconnect-sso: Update to 0.7.2.Efraim Flashner
* gnu/packages/vpn.scm (openconnect-sso): Update to 0.7.2. [arguments]: Remove 'adjust-package-version-requirements phase.
2021-04-13gnu: Add r-hmm.Roel Janssen
* gnu/packages/cran.scm (r-hmm): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-04-13gnu: python-tinycss2: Enable tests.Ricardo Wurmus
* gnu/packages/python-web.scm (python-tinycss2)[source]: Fetch from git repository to include tests. [arguments]: Build from source with flit. [native-inputs]: Add python-flit, python-pytest, python-pytest-cov, python-pytest-flake8, and python-pytest-isort.
2021-04-13gnu: python-ipywidgets: Update to 7.6.3.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-ipywidgets): Update to 7.6.3. [propagated-inputs]: Add python-ipython, python-jupyterlab-widgets, and python-nbformat. [native-inputs]: Remove python-nose; add python-mock and ptyhon-pytest-cov.
2021-04-13gnu: python-widgetsnbextension: Remove unnecessary inputs.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-widgetsnbextension)[propagated-inputs]: Remove python-argon2-cffi, python-ipykernel, and python-terminado. [native-inputs]: Remove python-certifi and python-nose.
2021-04-13gnu: Add python-jupyterlab-widgets.Ricardo Wurmus
* gnu/packages/jupyter.scm (python-jupyterlab-widgets): New variable.
2021-04-13gnu: Add python-jupyter-packaging.Ricardo Wurmus
* gnu/packages/jupyter.scm (python-jupyter-packaging): New variable.
2021-04-13gnu: Add python-deprecation.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-deprecation): New variable.
2021-04-13gnu: python-testpath: Update to 0.4.4.Ricardo Wurmus
* gnu/packages/check.scm (python-testpath): Update to 0.4.4. [arguments]: Build the package as intended with flit. [native-inputs]: Add python-flit.
2021-04-13gnu: python-flit: Update to 3.2.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-flit): Update to 3.2.0. [source]: Fetch from git repository to include flit_core. [arguments]: Add phases to bootstrap the build. [propagated-inputs]: Add python-pytoml and python-toml. [native-inputs]: Add python-docutils, python-responses, python-pygments-github-lexers, python-pytest, python-pytest-cov, python-sphinx, python-sphinxcontrib-github-alt, and python-testpath.
2021-04-13gnu: Add python-sphinxcontrib-github-alt.Ricardo Wurmus
* gnu/packages/sphinx.scm (python-sphinxcontrib-github-alt): New variable.
2021-04-13gnu: Add python-requests-unixsocket.Ricardo Wurmus
* gnu/packages/python-web.scm (python-requests-unixsocket): New variable.
2021-04-13gnu: Add python-pygments-github-lexers.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pygments-github-lexers): New variable.
2021-04-13gnu: Add python-pytoml.Ricardo Wurmus
* gnu/packages/python-build.scm (python-pytoml): New variable.
2021-04-13gnu: Remove python2-ipykernel.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-ipykernel): Remove variable. (python-ipykernel)[properties]: Remove python2-variant.
2021-04-13gnu: Remove python2-jupyter-console.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-jupyter-console): Remove variable. (python-jupyter-console)[properties]: Remove python2-variant.
2021-04-13gnu: Remove python2-jupyter-core.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-jupyter-core): Remove variable.
2021-04-13gnu: Remove python2-ipyparallel.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-ipyparallel): Remove variable.
2021-04-13gnu: Remove python2-matplotlib-documentation.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-matplotlib-documentation): Remove variable.
2021-04-13gnu: python-nbformat: Update to 5.1.3.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-nbformat): Update to 5.1.3. [arguments]: Remove to enable tests. [native-inputs]: Add python-pytest. [properties]: Add python2-variant. (python2-nbformat): Keep at version 4.4.0; override version and source field.
2021-04-13gnu: python-nbconvert: Update to 6.0.7.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-nbconvert): Update to 6.0.7. [arguments]: Remove configure flags, enable tests, override check phase. [propagated-inputs]: Add python-defusedxml, python-nbclient, python-pandocfilters, python-jupyterlab-pygments, and python-testpath. [properties]: Add python2-variant. (python2-nbconvert): Override version, source, arguments, and propagated-inputs.
2021-04-13gnu: Add python-nbclient.Ricardo Wurmus
* gnu/packages/jupyter.scm (python-nbclient): New variable.
2021-04-13gnu: Add python-jupyterlab-pygments.Ricardo Wurmus
* gnu/packages/jupyter.scm (python-jupyterlab-pygments): New variable.
2021-04-13gnu: Add python-nest-asyncio.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-nest-asyncio): New variable.
2021-04-13gnu: python-notebook: Update inputs.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-notebook)[propagated-inputs]: Add python-argon2-cffi, python-ipykernel, python-ipython-genutils, python-jinja2, python-jupyter-client, python-pyzmq, python-tornado-6, and python-traitlets. [native-inputs]: Remove python-nose and python-sphinx; add python-coverage, python-nbval, python-pytest, python-pytest-cov, and python-requests-unixsocket. [arguments]: Use pytest instead of nosetests.
2021-04-13gnu: python-notebook: Update to 6.3.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-notebook): Update to 6.3.0.
2021-04-13gnu: python-widgetsnbextension: Add missing inputs.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-widgetsnbextension)[propagated-inputs]: Add python-argon2-cffi and python-terminado.
2021-04-13gnu: python-ipykernel: Update to 5.5.3.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-ipykernel): Update to 5.5.3.
2021-04-13gnu: python-jupyter-client: Update to 6.1.12.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-jupyter-client): Update to 6.1.12. [propagated-inputs]: Add python-dateutil and python-tornado-6. [native-inputs]: Add python-pytest.
2021-04-13gnu: python-jupyter-core: Update to 4.7.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-jupyter-core): Update to 4.7.1.
2021-04-13gnu: python-terminado: Update to 0.9.4.Ricardo Wurmus
* gnu/packages/python-web.scm (python-terminado): Update to 0.9.4. [propagated-inputs]: Replace python-tornado with python-tornado-6. [native-inputs]: Replace python-nose with python-pytest. [home-page]: Follow redirect. [arguments]: Update check phase.
2021-04-13gnu: esbuild: Update to 0.11.9.Ryan Prior
* gnu/packages/web.scm (esbuild): Update to 0.11.9. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-04-13gnu: visidata: Update to 2.4.Ryan Prior
* gnu/packages/visidata.scm (visidata): Update to 2.4. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-04-13gnu: gnu-standards: Update to 2020-11-25.Morgan Smith
* gnu/packages/gnu-doc.scm (gnu-standards): Update to 2020-11-25. [source]: Make file-name more descriptive. Use version variable for revision. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-04-13gnu: Add texlive-xcharter.Paul Garlick
* gnu/packages/tex.scm: New variable.
2021-04-13tests: halt: Fix it.Mathieu Othacehe
This fixes: <https://issues.guix.gnu.org/47727>. The OCR prompt detection is failing, so remove it altogether. It looks like the test doesn't need the prompt detection delay to work properly. * gnu/tests/base.scm (run-halt-test): Remove failing OCR detection.
2021-04-12services: postgresql: Change service default socket directory.Christopher Baines
Fixes <https://bugs.gnu.org/46737>. PostgreSQL running with a different socket directory to the default one in the package itself breaks some services, this commit restores the previous behaviour where PostgreSQL by default will run with a socket directory that matches the default used by PostgreSQL packaged for Guix. Switching to a different default value can happen, but only alongside changing the PostgreSQL package. * gnu/services/databases.scm (<postgresql-config-file>)[socket-directory]: Change default to #false. * doc/guix.texi (Database Services): Update documentation, and specify a different value for disabling connections via sockets. * gnu/tests/guix.scm (%guix-data-service-os): Use default PostgreSQL behaviour. * gnu/tests/monitoring.scm (%zabbix-os): Likewise. * gnu/tests/web.scm (patchwork-os): Likewise. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-12gnu: guile-picture-language: Update to 0.0.1-5.a1322bf.Ricardo Wurmus
* gnu/packages/guile-xyz.scm (guile-picture-language): Update to 0.0.1-5.a1322bf.
2021-04-12etc/committer: Add missing newline.Morgan Smith
* etc/committer.scm.in (main): Add newline to message. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-04-12etc/committer: Use git plumbing instead of porcelain.Morgan Smith
* etc/committer.scm.in (diff-info): Use "git diff-files" instead of "git diff". (old-sexp): Use "git cat-file" instead of "git show". Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-04-12doc: Document 'gnu-build-system' keyword parameters.Ludovic Courtès
* doc/guix.texi (Build Systems): Document keyword parameters of 'gnu-build-system'.
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