| Age | Commit message (Expand) | Author |
|---|
| 2024-01-16 | gnu: python-umap-learn: Update to 0.5.5....* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.5.
[build-system]: Use pyproject-build-system.
[arguments]: Remove 'numpy-compatibility and custom 'check phases.
Change-Id: I2123f66519730d43e454d9536e8cb7b6c4569d56
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-pynndescent: Update to 0.5.11....* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.11.
[build-system]: Use pyproject-build-system.
[arguments]: Remove.
[propagated-inputs]: Add python-importlib-metadata.
Change-Id: I14f15ea98157ed15b360971c30fe00c5f00af4a7
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-scikit-learn: Update to 1.3.2....* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.3.2.
[build-system]: Use pyproject-build-system.
[arguments]: Move test flags to #:test-flags.
[native-inputs]: Replace python-cython with python-cython-0.29.35.
Change-Id: Iac6107dae752c42d9f57448a66eed0526974d57e
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-matplotx: Disable test_png test....* gnu/packages/python-xyz.scm (python-matplotx)[arguments]: Disable test_png
test.
Change-Id: I19a954786d828a1b717c9c4021ad7f5c6172366c
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-pypng: Update to 0.20220715.0....* gnu/packages/python-xyz.scm (python-pypng): Update to 0.20220715.0.
[build-system]: Use pyproject-build-system.
[arguments]: Add 'pre-check phase.
[native-inputs]: Add python-pytest.
Change-Id: Ic47c653f94a688048383eba216f01d7987625680
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-scikit-image: Update to 0.22.0....* gnu/packages/python-science.scm (python-scikit-image): Update to 0.22.0.
[source]: Fetch from git repository.
[build-system]: Use pyproject-build-system.
[arguments]: Use G-expression; remove custom 'build phase; simplify 'check
phase; enable all tests.
[propagated-inputs]: Add python-lazy-loader.
[native-inputs]: Add meson-python, python-numpydoc, python-packaging, and
python-wheel.
Change-Id: I00ede026a7941eae36157106f753a21fb64099c3
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-imageio: Update to 2.33.1....* gnu/packages/python-xyz.scm (python-imageio): Update to 2.33.1.
[propagated-inputs]: Remove python-psutil; add python-tifffile.
[native-inputs]: Add python-black, python-flake8, python-fsspec, and
python-pytest-cov.
Change-Id: I5c64d939f5ee94ac9ec8fdbd7b51cd978b7df0fb
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-lazy-loader: Update to 0.3....* gnu/packages/python-xyz.scm (python-lazy-loader): Update to 0.3.
[native-inputs]: Add python-pre-commit.
Change-Id: Id4f8b61e6e60dd6da04beb8c1e4d064dc34d994c
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-tifffile: Update to 2023.12.9....* gnu/packages/python-xyz.scm (python-tifffile): Update to 2023.12.9.
[propagated-inputs]: Remove python-imagecodecs.
[native-inputs]: Add python-pytest.
Change-Id: I2567bef390e286ed4399cc67b80a9df503f53c0a
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-scipy: Update to 1.11.4....* gnu/packages/python-science.scm (python-scipy): Update to 1.11.4.
[arguments]: Use mesonpy backend.
[inputs]: Replace pybind11 with pybind11-2.10.
[native-inputs]: Add python-click, python-doit, python-pooch, and
python-pydevtool; replace python-cython with python-cython-0.29.35.
Change-Id: I4b26e1b6382899bba24f84461f154e97765e08f5
| Ricardo Wurmus |
| 2024-01-16 | gnu: meson-python: Update to 0.15.0....* gnu/packages/build-tools.scm (meson-python): Update to 0.15.0.
[arguments]: Add phase 'delete-directory.
[propagated-inputs]: Add python-cython, python-pyproject-metadata-0.7, and
python-typing-extensions.
[native-inputs]: Add python-pytest-cov.
Change-Id: I412af929c9e0485aa2a15e316d247f58e6f3477b
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add python-pydevtool....* gnu/packages/python-xyz.scm (python-pydevtool): New variable.
Change-Id: I325b81fa6421094a5a64084c06e66b8fa136e270
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add python-pyproject-metadata-0.7....* gnu/packages/python-xyz.scm (python-pyproject-metadata-0.7): New variable.
Change-Id: I7c47c911fa2a33c0b5711b0009f31b3e32c1c1d7
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-doit: Update to 0.36.0....* gnu/packages/python-xyz.scm (python-doit): Update to 0.36.0.
[build-system]: Use pyproject-build-system.
[arguments]: Disable test_execute test.
[propagated-inputs]: Remove python-pyinotify; add python-importlib-metadata.
[description]: Add missing spaces between two sentences.
Change-Id: I1d046201c9bef63477f8fb0a2f8494bffbbbc711
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add pybind11-2.10....* gnu/packages/python-xyz.scm (pybind11-2.10): New variable.
Change-Id: Ia7915af3baca36b0677d3f762046585abc473f56
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add python-cython-0.29.35....* gnu/packages/python-xyz.scm (python-cython-0.29.35): New variable.
Change-Id: I09ec851a2051e885f6417524bbeeb81b743bef0b
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add python-pydoc-markdown....* gnu/packages/python-xyz.scm (python-pydoc-markdown): New variable.
Change-Id: I03e45c2b87f626f7a8113d785c72c14a301d79be
| Ricardo Wurmus |
| 2024-01-16 | gnu: python-yapf: Update to 0.32.0....* gnu/packages/python-xyz.scm (python-yapf): Update to 0.32.0.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-pytest.
[propagated-inputs]: Add python-importlib-metadata, python-platformdirs, and
python-tomli.
Change-Id: I30fa0b9d643f6585624da87d5c1a1edbb59425c4
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add python-docspec-python....* gnu/packages/python-xyz.scm (python-docspec-python): New variable.
Change-Id: Ic607d0a34a8601dd464251edd8c8509314b7489c
| Ricardo Wurmus |
| 2024-01-16 | gnu: Add python-nr-util....* gnu/packages/python-xyz.scm (python-nr-util): New variable.
Change-Id: I26dda5e5bc03334fb476e3f1fd2fa6aaf93a91c3
| Ricardo Wurmus |
| 2024-01-15 | gnu: go-github-com-arceliar-ironwood: Update to v0.0.0-20231127131626-465b82d......* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): Update to
v0.0.0-20231127131626-465b82dfb5bd.
Change-Id: Ia94d7c88e54d33f7bb7b5054a757d7ef203d47c2
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Artyom V. Poptsov |
| 2024-01-15 | gnu: yggdrasil: Update to 0.5.4....* gnu/packages/networking.scm (yggdrasil): Update to 0.5.4.
Change-Id: I4f386e1b69627b0c5a6095c42274b8a8bff8bfd9
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Artyom V. Poptsov |
| 2024-01-15 | gnu: hypercorn: Reformat with guix style....* gnu/packages/python-web.scm (hypercorn): Reformat with guix style.
| Troy Figiel |
| 2024-01-15 | gnu: hypercorn: Adjust inputs....* gnu/packages/python-web.scm (hypercorn)[propagated-inputs]: Add
python-exceptiongroup and python-tomli. Remove python-toml and
python-typing-extensions.
[native-inputs]: Remove python-mock.
| Troy Figiel |
| 2024-01-15 | gnu: Remove python-tslearn....This package now lives in the guix-science channel.
* gnu/packages/machine-learning.scm (python-tslearn): Remove variable.
Change-Id: I655df3417d258cb1231746626817fde9628e9569
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-docspec....* gnu/packages/python-xyz.scm (python-docspec): New variable.
Change-Id: I3103bde3483273a335156b38de742f493fd366f1
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-databind-json....* gnu/packages/python-xyz.scm (python-databind-json): New variable.
Change-Id: Iaab64e28ba6772c14704ff67cffab21a2f555460
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-databind-core....* gnu/packages/python-xyz.scm (python-databind-core): New variable.
Change-Id: I45bf0ec5ef123ea20c50e2ca3caf930bfba45eea
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-typeapi....* gnu/packages/python-xyz.scm (python-typeapi): New variable.
Change-Id: Id89f3152bcd593d677c4fcb7c98d586cd50e820b
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-nr-stream....* gnu/packages/python-xyz.scm (python-nr-stream): New variable.
Change-Id: I59489156e4675a64a31b1cb7f62b7c845c005ce8
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-nr-date....* gnu/packages/python-xyz.scm (python-nr-date): New variable.
Change-Id: I4251aef073df29ccada70f1398bce38cfb8962ba
| Ricardo Wurmus |
| 2024-01-15 | gnu: Add python-namex....* gnu/packages/python-xyz.scm (python-namex): New variable.
Change-Id: I02d4ed5e426f0b432c27086aa90628ae54759ca2
| Ricardo Wurmus |
| 2024-01-15 | gnu: python-requests-kerberos: Enable tests....* gnu/packages/python-web.scm (python-requests-kerberos): Enable tests.
[source]: Replace the PyPI release by the Github release.
[build-system]: Swap to pyproject-build-system.
[native-inputs]: Add python-pytest and python-pytest-mock.
Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: Iea750cf722293c4054a6c6e43787806f8f2fd5e2
| Troy Figiel |
| 2024-01-15 | gnu: python-requests-kerberos: Fix build....* gnu/packages/python-web.scm (python-requests-kerberos)[propagated-inputs]:
Add python-gssapi.
Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I65d1fac0339a119e7a4912d5db150b4adb7586ad
| Troy Figiel |
| 2024-01-15 | gnu: python-pyspnego: Propagate python-krb5....* gnu/packages/python-xyz.scm (python-pyspnego)[propagated-inputs]: Add
python-krb5.
Change-Id: I2c8ccbd66394cb90ea047f7327d05ecbfe2ec22d
| Sharlatan Hellseher |
| 2024-01-15 | gnu: Add python-krb5....* gnu/packages/python-xyz.scm (python-krb5): New variable.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Troy Figiel |
| 2024-01-15 | gnu: Remove python-activepapers....<https://issues.guix.gnu.org/68425>
This package fails to build and has been not maintained since 2017.
* gnu/packages/python-xyz.scm (python-activepapers): Remove variable.
Reported-by: Troy Figiel <troy@troyfigiel.com>
Change-Id: Id1e968cd4e06919a80ad05e5c8d3fb207426fdde
| Sharlatan Hellseher |
| 2024-01-15 | gnu: hpcguix-web: Add explicit dependency on Guile-GnuTLS....This is necessary in hpcguix-web 0.4.1 to connect to
https://disarchive.guix.gnu.org.
* gnu/packages/web.scm (hpcguix-web)[arguments]: In ‘wrap-program’ phase,
add guile-gnutls to the wrapper’s search path.
[inputs]: Add GUILE-GNUTLS.
Change-Id: Ic4d6f65adeb763a404fc24c7e1c87fd7d26550c7
| Ludovic Courtès |
| 2024-01-14 | gnu: fish-foreign-env: Update to 0.20230823....* gnu/packages/shells.scm (fish-foreign-env): Update to 0.20230823.
[arguments]: Do no substitute in file that no longer exists.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: I04138c1d3e8c174b2197e5ca60aaca4caa5453cc
| Tanguy Le Carrour |
| 2024-01-14 | gnu: cuirass: Update to 7bcd3d0....* gnu/packages/ci.scm (cuirass): Update to 7bcd3d0.
Change-Id: Iefc460df509a2c006f3a49d6050ef08940ed2850
| Ludovic Courtès |
| 2024-01-14 | gnu: openssh: Fix build on ppc64le....* gnu/packages/ssh.scm (openssh)[source]:
Use 'openssh-gcc-13-ppc64le-fzero-call-used-regs.patch'.
* gnu/packages/patches/openssh-gcc-13-ppc64le-fzero-call-used-regs.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Reported-by: Marcel van der Boom <marcel@van-der-boom.nl>.
Change-Id: I41b1350b2cdd1487a8fd69b13b64f63c0dc166c9
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Jack Hill |
| 2024-01-14 | gnu: guile-ssh: Update to 0.16.4....* gnu/packages/ssh.scm (guile-ssh): Update to 0.16.4.
[arguments]: Improve the style.
Change-Id: Ib7d741e7f4fc7a1fc167cfa4f7953f84d9f4d390
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Artyom V. Poptsov |
| 2024-01-14 | gnu: hpcguix-web: Update to 0.4.1....* gnu/packages/web.scm (hpcguix-web): Update to 0.4.1.
Change-Id: I8bd642735b3cbdf03b07cdd184295b6e32a4e6f7
| Ludovic Courtès |
| 2024-01-14 | tests: install: Fix encrypted-home-os, encrypted-home-os-key-file tests....The installation no longer fits into the 1.6G, leading to a warning while
running the test:
guix system: warning: at least 1526.8 MB needed but only 1408.4 MB available in /mnt
Followed by a failure:
93% [#################################################################### ]note: build failure may have been caused by lack of free disk space
builder for `/gnu/store/8wl8q8nc1za0vlyv21jpzwgml45njgk2-module-import-compiled.drv' failed with exit code 1
This commit increases the root partition to 2G, making the test pass again.
* gnu/tests/install.scm (%encrypted-root-installation-script): Increase the
root partition to 2G.
(%test-encrypted-home-os), (%test-encrypted-home-os-key-file): Increase the
target size to 3G to accommodate for the larger root partition.
Change-Id: I0f7092f7b7fc9992d3f895a1eaecf1f2065b7360
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Tomas Volf |
| 2024-01-14 | tests: install: Fix encrypted-root-os test....The installation no longer fits into the 1.6G, leading to a warning while
running the test:
guix system: warning: at least 1526.8 MB needed but only 1408.4 MB available in /mnt
Followed by a failure:
93% [#################################################################### ]note: build failure may have been caused by lack of free disk space
builder for `/gnu/store/8wl8q8nc1za0vlyv21jpzwgml45njgk2-module-import-compiled.drv' failed with exit code 1
This commit increases the root partition to 2G, making the test pass again.
* gnu/tests/install.scm (%encrypted-root-installation-script): Increase the
root partition to 2G.
Change-Id: I4cc5c78cfbd93ab2ae92ec77603ce6fee0289843
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Tomas Volf |
| 2024-01-14 | tests: install: Use the smallest possible iteration time for LUKS....For testing that installation works, there is no need to spent 2000ms (the
default) iterating while generating the encryption key. This commit therefore
sets the iteration time to the lowest possible value, 1(ms).
* gnu/tests/install.scm (%encrypted-root-installation-script):
(%encrypted-home-installation-script):
(%encrypted-root-not-boot-installation-script): Pass -i 1 to luksFormat
invocation.
Change-Id: Iab79459b48bebe4d293b18290a236c6414fb27fc
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Tomas Volf |
| 2024-01-14 | tests: Add `encrypted-home-os-key-file' installation test....Based on encrypted-home-os, this test verifies unlocking via a key file.
* gnu/tests/install.scm (%encrypted-home-os-key-file),
(%encrypted-home-os-key-file-source): New variables.
(%test-encrypted-home-os-key-file): New exported variables.
(%encrypted-home-installation-script): Generate initrd with a key file for
unlocking the LUKS.
Change-Id: I04460155284bdef7e18da645f2b4b26bd8e86636
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Tomas Volf |
| 2024-01-14 | bootloader: grub: Add support for loading an additional initrd....In order to be able to provide decryption keys for the LUKS device, they need
to be available in the initial ram disk. However they cannot be stored inside
the usual initrd, since it is stored in the store and being a
world-readable (as files in the store are) is not a desired property for a
initrd containing decryption keys. This commit adds an option to load
additional initrd during the boot, one that is not stored inside the store and
therefore can contain secrets.
Since only grub supports encrypted /boot, only grub is modified to use the
extra-initrd. There is no use case for the other bootloaders.
* doc/guix.texi (Bootloader Configuration): Describe the new extra-initrd
field.
* gnu/bootloader.scm (<bootloader-configuration>): Add extra-initrd field.
* gnu/bootloader/grub.scm (make-grub-configuration): Use the extra-initrd
field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: I995989bb623bb594ccdafbf4a1a6de941bd4189f
| Tomas Volf |
| 2024-01-14 | mapped-devices: Allow unlocking by a key file....Requiring the user to input their password in order to unlock a device is not
always reasonable, so having an option to unlock the device using a key file
is a nice quality of life change.
* gnu/system/mapped-devices.scm (open-luks-device): Add #:key-file argument.
(luks-device-mapping-with-options): New procedure.
* doc/guix.texi (Mapped Devices): Describe the new procedure.
Change-Id: I1de4e045f8c2c11f9a94f1656e839c785b0c11c4
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Tomas Volf |
| 2024-01-14 | gnu: Make intermediate packages public but hidden....This makes those packages visible to (gnu ci), giving them first class
in the eyes of Cuirass and similar tools, in turn ensuring substitutes
are available (this was discovered by running ‘guix weather -c 10’).
* gnu/packages/rust.scm (rust-bootstrap, rust-1.55)
(rust-1.56, rust-1.57, rust-1.58, rust-1.59, rust-1.60)
(rust-1.61, rust-1.62, rust-1.63, rust-1.64, rust-1.65)
(rust-1.66, rust-1.67, rust-1.68, rust-1.69, rust-1.70)
(rust-1.71, rust-1.72, rust-1.73): Make variable public and add
‘hidden?’ property.
(rust): Remove ‘hidden?’ property.
* gnu/packages/java.scm (java-hamcrest-parent-pom)
(java-org-ow2-parent-pom-1.3, java-asm-bootstrap): Make variable public
and add ‘hidden?’ property.
* gnu/packages/ocaml.scm (dune-bootstrap)
(ocaml4.09-dune-bootstrap, ocaml5.0-dune-bootstrap): Likewise.
Change-Id: I32b0ea639a4f1c39466875acdbc9cbadf75c7668
| Ludovic Courtès |
