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2016-03-18gnu: Add python-flask.Leo Famulari
* gnu/packages/python.scm (python-flask, python2-flask): New variables.
2016-03-18gnu: Add python-musicbrainzngs.Leo Famulari
* gnu/packages/music.scm (python-musicbrainzngs, python2-musicbrainzngs): New variables.
2016-03-18gnu: Add python-munkres.Leo Famulari
* gnu/packages/python.scm (python-munkres, python2-munkres): New variables.
2016-03-18gnu: Add python-mutagen.Leo Famulari
* gnu/packages/music.scm (python-mutagen, python2-mutagen): New variables.
2016-03-18gnu: linux-libre-4.4: Update to 4.4.6.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.6.
2016-03-18gnu: bundler: Update to 1.11.2.David Thompson
* gnu/packages/ruby.scm (bundler): Update to 1.11.2.
2016-03-18gnu: vigra: Update to 1.11.0.Andreas Enge
* gnu/packages/image.scm (vigra)[source]: Update to 1.11.0. [arguments]: Disable parallel builds.
2016-03-18gnu: aria2: Update to 1.21.0.Efraim Flashner
* gnu/packages/bittorrent.scm (aria2): Update to 1.21.0.
2016-03-17gnu: libotr: Fix tests on mips64el.Mark H Weaver
* gnu/packages/patches/libotr-test-auth-fix.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/messaging.scm (libotr)[source]: Add patch.
2016-03-17substitute: Do not leak file descriptors for TLS connections.Ludovic Courtès
Partially fixes <http://bugs.gnu.org/20145>. * guix/scripts/substitute.scm (fetch, download-cache-info): (http-multiple-get, fetch-narinfos, progress-report-port): Use 'close-connection' instead of 'close-port'.
2016-03-17substitute: Cache transient HTTP errors for 10mn.Ludovic Courtès
* guix/scripts/substitute.scm (fetch-narinfos)[handle-narinfo-response]: Cache transient errors for 10mn. (%narinfo-transient-error-ttl): New variable.
2016-03-17lint: Do not leak file descriptors for TLS connections.Ludovic Courtès
Partially fixes <http://bugs.gnu.org/20145>. * guix/scripts/lint.scm (probe-uri): Use 'close-connection' instead of 'close-port'.
2016-03-17download: Add 'close-connection'.Ludovic Courtès
Partially fixes <http://bugs.gnu.org/20145>. * guix/build/download.scm (add-weak-reference): Remove. (%tls-ports): New variable. (register-tls-record-port): New procedure. (tls-wrap): Use it instead of 'add-weak-reference'. (close-connection): New procedure.
2016-03-17substitute: Update progress for responses different from 200/404.Ludovic Courtès
* guix/scripts/substitute.scm (fetch-narinfos)[handle-narinfo-response]: Add missing call to 'update-progress!'.
2016-03-17gnu: postgresql: Update to 9.5.1.Efraim Flashner
* gnu/packages/databases.scm (postgresql): Update to 9.5.1.
2016-03-17gnu: mysql: Update to 5.7.11.Efraim Flashner
* gnu/packages/databases.scm (mysql): Update to 5.7.11. [source]: Add archives as alternate download location. [arguments]: Remove custom phase 'strip-extra-references. Add substitution to target boost-1.60.
2016-03-17gnu: gnome-session: Add elogind input.Andy Wingo
* gnu/packages/gnome.scm (gnome-session): Add elogind input, while disabling the use of systemd's journal.
2016-03-17gnu: bless: Remove bundled sources for sparsehash.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bless)[source]: Delete "google-sparsehash" sources. [inputs]: Add "sparsehash".
2016-03-17gnu: Add CD-HIT.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (cd-hit): New variable.
2016-03-17doc: Add missing comma after @xref.Ludovic Courtès
Reported by Alex Kost <alezost@gmail.com>. * doc/guix.texi (Service Reference): Add comma after @xref.
2016-03-17doc: GNOME is now available.Ludovic Courtès
* doc/guix.texi (Limitations): Rephrase item about GNOME and KDE.
2016-03-17gnu: elogind: Update to 219.14.Andy Wingo
* gnu/packages/freedesktop.scm (elogind): Update to 219.14.
2016-03-17gnu: emacs-pdf-tools: Add missing input.Alex Kost
This is a followup to commit eccd0b57a1f05b3caca28604f4d2c06556e2fe05. * gnu/packages/emacs.scm (emacs-pdf-tools)[propagated-inputs]: Add 'let-alist'.
2016-03-17gnu: emacs-pdf-tools: Use emacs-build-system for elisp side.Alex Kost
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Add phases from emacs-build-system to build elisp side. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-03-17gnu: Add WAH plugins.Ricardo Wurmus
* gnu/packages/audio.scm (wah-plugins): New variable.
2016-03-17gnu: Add STE plugins.Ricardo Wurmus
* gnu/packages/audio.scm (ste-plugins): New variable.
2016-03-17gnu: Add FIL plugins.Ricardo Wurmus
* gnu/packages/audio.scm (fil-plugins): New variable.
2016-03-17gnu: Add REV plugins.Ricardo Wurmus
* gnu/packages/audio.scm (rev-plugins): New variable.
2016-03-17gnu: Add AMB plugins.Ricardo Wurmus
* gnu/packages/audio.scm (amb-plugins): New variable.
2016-03-17gnu: Add g2reverb.Ricardo Wurmus
* gnu/packages/audio.scm (g2reverb): New variable.
2016-03-17gnu: Add vco-plugins.Ricardo Wurmus
* gnu/packages/audio.scm (vco-plugins): New variable.
2016-03-17gnu: Add mcp-plugins.Ricardo Wurmus
* gnu/packages/audio.scm (mcp-plugins): New variable.
2016-03-17licenses: Add Apache Software License 1.1.Roel Janssen
* guix/licenses.scm (asl1.1): New variables. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-03-17gnu: Add perl-text-neattemplate.Jochem Raat
* gnu/packages/perl.scm (perl-text-neattemplate): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-03-17gnu: Add freefall.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (freefall): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-03-17gnu: mariadb: Update to 10.1.12.Efraim Flashner
* gnu/packages/databases.scm (mariadb): Update to 10.1.12.
2016-03-16build: Do not remake doc/guix.1.Eric Bavier
* doc.am (doc/guix.1): Do not depend on $(sub_commands_mans) which will always appear out-of-date.
2016-03-16gnu: petsc: Fix compiler configuration references.Eric Bavier
* gnu/packages/maths.scm (petsc)[arguments]: When patching compiler driver paths, do not assume they come from fortran input.
2016-03-16gnu: slepc: Set origin file-name.Eric Bavier
* gnu/packages/maths.scm (slepc)[source]: Add file-name.
2016-03-16gnu: Fix definitions of gcc-toolchain-4.8 and gcc-toolchain-4.9.Mark H Weaver
* gnu/packages/commencement.scm (gcc-toolchain-4.8): Use gcc-4.8, not gcc-final. (gcc-toolchain-4.9): Use gcc-final, not gcc-4.9. * gnu/packages/gcc.scm (gcc): Add reminder comment for the future.
2016-03-16gnu: guix: Update development snapshot to 71e2065.Ludovic Courtès
* gnu/packages/package-management.scm (guix-devel): Update to 71e2065.
2016-03-16gnu: offlineimap: Update to 6.7.0.Efraim Flashner
* gnu/packages/mail.scm (offlineimap): Update to 6.7.0.
2016-03-16substitute: Honor client-provided empty URL list.Ludovic Courtès
Before that, 'guix build --substitute-urls=""' would lead to using the daemon's own URL list instead of the empty list. The 'or*' hack, which is to blame, had become unnecessary since commit fb4bf72be3fbc23bca35ba4b842b7e1517ef0e3a. Reported by Mark H Weaver <mhw@netris.org>. * guix/scripts/substitute.scm (or*): Remove. (%cache-urls): Use 'or' instead of 'or*'. * tests/store.scm ("substitute query, alternating URLs"): Add test with empty URL list. * doc/guix.texi (Common Build Options): Mention the empty string.
2016-03-16build: Write emacs-autoloads.el to $(builddir).Ludovic Courtès
* emacs.am ($(AUTOLOADS)): Write to $(builddir), not $(srcdir).
2016-03-16substitute: Honor the 'max-age' of 'Cache-Control' headers.Ludovic Courtès
This allows substitute servers to tell 'guix substitute' how long they can cache narinfo lookups. * guix/scripts/substitute.scm (cache-narinfo!): Add 'ttl' parameter. [cache-entry]: Honor it. (fetch-narinfos)[handle-narinfo-response]: Check the 'Cache-Control' header of RESPONSE and pass its 'max-age' value to 'cache-narinfo!'.
2016-03-16substitute: Make room for a 'ttl' field in cached entries.Ludovic Courtès
* guix/scripts/substitute.scm (cached-narinfo): Expect 'narinfo' sexp version 2 with a 'ttl' field. (cache-narinfo!)[cache-entry]: Produce 'narinfo' sexp version 2 with a 'ttl' field. (remove-expired-cached-narinfos)[expired?]: Read 'narinfo' sexp version 2.
2016-03-16gnu: cm: Update to 0.3.Andreas Enge
* gnu/packages/algebra.scm (cm): Update to 0.3. [license]: Change to gpl3+.
2016-03-16build: Default to "https://mirror.hydra.gnu.org/" for substitutes.Ludovic Courtès
* config-daemon.ac: Check for (gnutls) and define 'GUIX_SUBSTITUTE_URLS'. * nix/nix-daemon/guix-daemon.cc (main): Use GUIX_SUBSTITUTE_URLS. * guix/store.scm (%default-substitute-urls): Use 'https' when (gnutls) is available. * doc/guix.texi (Binary Installation): Mention mirrors (Invoking guix-daemon): Mention mirror.hydra.gnu.org. (Substitutes): Mention mirrors. (Invoking guix archive): Show https URLs.
2016-03-16http-client: No 'setvbuf' for non-file ports.Ludovic Courtès
* guix/http-client.scm (http-fetch): Do not call 'setvbuf' on non-file ports.
2016-03-16gnu: Add r-dnacopy.Roel Janssen
* gnu/packages/bioinformatics.scm (r-dnacopy): New variable.
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