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2021-05-31gnu: r-genomationdata: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-genomationdata): Move from here... * gnu/packages/bioconductor.scm (r-genomationdata): ...to here. [source]: Replace 'string-append' by 'bioconductor-uri' with 'experiment. zimoun
2021-05-31gnu: r-genomation: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-genomation): Move from here... * gnu/packages/bioconductor.scm (r-genomation): ...to here. zimoun
2021-05-31gnu: r-go-db: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-go-db): Move from here... * gnu/packages/bioconductor.scm (r-go-db): ...to here. [source]: Replace 'string-append' by 'bioconductor-uri' with 'annotation. zimoun
2021-05-31gnu: r-seqpattern: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-seqpattern): Move from here... * gnu/packages/bioconductor.scm (r-seqpattern): ...to here. zimoun
2021-05-31gnu: r-impute: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-impute): Move from here... * gnu/packages/bioconductor.scm (r-impute): ...to here. zimoun
2021-05-31gnu: r-samr: Move to (gnu packages bioconductor)....* gnu/packages/cran.scm (r-samr): Move from here... * gnu/packages/bioconductor.scm (r-samr): ...to here. zimoun
2021-05-31gnu: r-msnbase: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-msnbase): Move from here... * gnu/packages/bioconductor.scm (r-msnbase): ...to here. zimoun
2021-05-31gnu: r-msnid: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-msnid): Move from here... * gnu/packages/bioconductor.scm (r-msnid): ...to here. zimoun
2021-05-31gnu: r-bsgenome: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-bsgenome): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome): ...to here. zimoun
2021-05-31gnu: r-topgo: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-topgo): Move from here... * gnu/packages/bioconductor.scm (r-topgo): ...to here. zimoun
2021-05-31gnu: r-genomicfeatures: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Move from here... * gnu/packages/bioconductor.scm (r-genomicfeatures): ...to here. zimoun
2021-05-31gnu: r-rtracklayer: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-rtracklayer): Move from here... * gnu/packages/bioconductor.scm (r-rtracklayer): ...to here. zimoun
2021-05-31gnu: r-genomicalignments: Move to (gnu packages bioconductor)....* gnu/packages/bioinformatics.scm (r-genomicalignments): Move from here... * gnu/packages/bioconductor.scm (r-genomicalignments): ...to here. zimoun
2021-05-31gnu: Add julia-prettytables....* gnu/packages/julia-xyz.scm (julia-prettytables): New variable. Efraim Flashner
2021-05-31gnu: Add julia-formatting....* gnu/packages/julia-xyz.scm (julia-formatting): New variable. Efraim Flashner
2021-05-31gnu: Add julia-typedtables....* gnu/packages/julia-xyz.scm (julia-typedtables): New variable. Efraim Flashner
2021-05-31gnu: Add julia-weakrefstrings....* gnu/packages/julia-xyz.scm (julia-weakrefstrings): New variable. Efraim Flashner
2021-05-31gnu: Add julia-pooledarrays....* gnu/packages/julia-xyz.scm (julia-pooledarrays): New variable. Efraim Flashner
2021-05-31gnu: Add julia-indirectarrays....* gnu/packages/julia-xyz.scm (julia-indirectarrays): New variable. Efraim Flashner
2021-05-31gnu: Add julia-rangearrays....* gnu/packages/julia-xyz.scm (julia-rangearrays): New variable. Efraim Flashner
2021-05-31gnu: Add julia-graphics....* gnu/packages/julia-xyz.scm (julia-graphics): New variable. Efraim Flashner
2021-05-31gnu: Add julia-mappedarrays....* gnu/packages/julia-xyz.scm (julia-mappedarrays): New variable. Efraim Flashner
2021-05-31gnu: Add julia-tensorcore....* gnu/packages/julia-xyz.scm (julia-tensorcore): New variable. Efraim Flashner
2021-05-31gnu: Add julia-quadmath....* gnu/packages/julia-xyz.scm (julia-quadmath): New variable. Efraim Flashner
2021-05-31gnu: Add julia-mocking....* gnu/packages/julia-xyz.scm (julia-mocking): New variable. Efraim Flashner
2021-05-31gnu: Add julia-exprtools....* gnu/packages/julia-xyz.scm (julia-exprtools): New variable. Efraim Flashner
2021-05-31gnu: Add julia-optimtestproblems....* gnu/packages/julia-xyz.scm (julia-optimtestproblems): New variable. Efraim Flashner
2021-05-31gnu: Add julia-matrixfactorizations....* gnu/packages/julia-xyz.scm (julia-matrixfactorizations): New variable. Efraim Flashner
2021-05-31gnu: Add julia-arraylayouts....* gnu/packages/julia-xyz.scm (julia-arraylayouts): New variable. Efraim Flashner
2021-05-31gnu: Add julia-statsapi....* gnu/packages/julia-xyz.scm (julia-statsapi): New variable. Efraim Flashner
2021-05-31gnu: Add julia-tables....* gnu/packages/julia-xyz.scm (julia-tables): New variable. Efraim Flashner
2021-05-31gnu: Add julia-missings....* gnu/packages/julia-xyz.scm (julia-missings): New variable. Efraim Flashner
2021-05-31gnu: Add julia-queryoperators....* gnu/packages/julia-xyz.scm (julia-queryoperators): New variable. Efraim Flashner
2021-05-31gnu: Add julia-tableshowutils....* gnu/packages/julia-xyz.scm (julia-tableshowutils): New variable. Efraim Flashner
2021-05-31gnu: Add julia-datavalues....* gnu/packages/julia-xyz.scm (julia-datavalues): New variable. Efraim Flashner
2021-05-31gnu: Add julia-tabletraits....* gnu/packages/julia-xyz.scm (julia-tabletraits): New variable. Efraim Flashner
2021-05-31gnu: Add julia-iteratorinterfaceextensions....* gnu/packages/julia-xyz.scm (julia-iteratorinterfaceextensions): New variable. Efraim Flashner
2021-05-31gnu: Add julia-datavalueinterfaces....* gnu/packages/julia-xyz.scm (julia-datavalueinterfaces): New variable. Efraim Flashner
2021-05-31gnu: Add julia-dataapi....* gnu/packages/julia-xyz.scm (julia-dataapi): New variable. Efraim Flashner
2021-05-31gnu: java-pep-adapter 2.1.23....* gnu/packages/pep.scm (java-pep-adapter): Update to 2.1.23. [source]: Switch to new git repo. [arguments]<make-flags>: Enable release-build, use new target names. [arguments]<phases>{fix-includes}: Remove phase. {pin-shared-lib-path}: Update file paths. {build-codegen}: New phase. {install}: Use "(install)". [native-inputs]: Add graphviz. [inputs]: Fix input util-linux. Hartmut Goebel
2021-05-31gnu: python-pep-adapter: Update to 2.1.3....* gnu/packages/pep.scm (python-pep-adapter): Update to 2.1.3. [source]: Switch to new git repo. [arguments]<phases>{remove-wheel-requirement}: New phase. [native-inputs]: Add python-pytest and python-pytest-forked. [inputs]: Remove asn1c, add python-setuptools-scm. util-linux. Hartmut Goebel
2021-05-31gnu: libpEpAdapter: Update to 2.1.21....* gnu/packages/pep.scm (libpEpAdapter): Update to 2.1.21. [source]: Swicht to new git repo. [arguments]<make-flags>: Enable release-build. Hartmut Goebel
2021-05-31gnu: pep-engine: Update to 2.1.34....* gnu/packages/pep.scm (fdik-libetpan): Update to current development version. [source]: Switch to pep.foundation. (pep-engine): Update to 2.1.34. [source]: Switch to new git repo. [arguments]<make-flags>: Enable release-build. [inputs]: Use normal sequoia. * gnu/packages/sequoia.scm (sequoia4pEp): Remove variable. Hartmut Goebel
2021-05-31gnu: yml2: Update to 2.7.0....* gnu/packages/pep.scm (yml2): Update to 2.7.0. [source]: Switch to new git repo. Hartmut Goebel
2021-05-31gnu: Add python-pyflow....* gnu/packages/python-science.scm (python-pyflow): New variable. Roel Janssen
2021-05-31gnu: Add python-google....* gnu/packages/python-web.scm (python-google): New variable. Roel Janssen
2021-05-31gnu: gnuastro: Update to 0.15....* gnu/packages/astronomy.scm (gnuastro): Update to 0.15. Efraim Flashner
2021-05-30doc: Add a note about networking requirements for SSH access to VMs....Fixes <https://issues.guix.gnu.org/48739>. It may seem silly, but when not realizing this firsthand, it can be quite surprising and thus not obvious to troubleshoot. Thanks to Eric Brown for their insightful comments on the tracker. * doc/guix.texi (Running Guix in a VM): Add a note that networking support must be available in the Guix System operating system declaration used for the VM. Maxim Cournoyer
2021-05-30gnu: r-benchmarkmedata: Fix typo in description....* gnu/packages/cran.scm (r-benchmarkmedata)[description]: Fix typo. Tobias Geerinckx-Rice
2021-05-30doc: Fix typos....* doc/contributing.texi (Translating Guix): Fix ‘runnig’ typo. Replace ‘target’ with ‘command’ to match the verb. Fix ‘refered’ and ‘formating’ too. Tobias Geerinckx-Rice
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