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2020-03-07gnu: r-depecher: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.2. [native-inputs]: Add r-knitr.
2020-03-07gnu: r-xcms: Update to 3.8.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.8.2.
2020-03-07gnu: r-yamss: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.12.1.
2020-03-07gnu: r-viridis: Add r-knitr.Ricardo Wurmus
* gnu/packages/statistics.scm (r-viridis)[native-inputs]: Add r-knitr.
2020-03-07gnu: r-vsn: Add r-knitr.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-vsn)[native-inputs]: Add r-knitr.
2020-03-07fd: Install bash completion properly.Michael Rohleder
* gnu/packages/rust-apps.scm (fd)[arguments]: Replace the dash in "bash-completion.d" with an underscore. Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-03-07gnu: anki: Fix mpv audio playbackRobert Smith
* gnu/packages/patches/anki-mpv-args.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/education.scm (anki): Adjust accordingly, wrap anki's PATH to include mpv executable. Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-03-07gnu: next: Fix build with SBCL 2.0.2.Pierre Neidhardt
* gnu/packages/web-browsers.scm (next)[arguments]: Fix lambda-list type error on SBCL 2.0.2.
2020-03-07gnu: s6-rc: Update to 0.5.1.2.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (s6-rc): Update to 0.5.1.2.
2020-03-07gnu: s6-portable-utils: Update to 2.2.2.2.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.2.2.
2020-03-07gnu: s6-networking: Update to 2.3.1.2.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (s6-networking): Update to 2.3.1.2.
2020-03-07gnu: s6-linux-utils: Update to 2.5.1.2.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (s6-linux-utils): Update to 2.5.1.2.
2020-03-07gnu: scm: Update to 5f3.Tobias Geerinckx-Rice
* gnu/packages/scheme.scm (scm): Update to 5f3.
2020-03-07gnu: ntp: Update to 4.2.8p14 [fixes Sec 3610, Sec 3596, Sec 3592].Tobias Geerinckx-Rice
https://support.ntp.org/bin/view/Main/SecurityNotice#Recent_Vulnerabilities * gnu/packages/ntp.scm (ntp): Update to 4.2.8p14.
2020-03-07gnu: ntp: Use HTTPS in metadata URIsTobias Geerinckx-Rice
* gnu/packages/ntp.scm (ntp)[home-page, license]: Use HTTPS.
2020-03-07gnu: unbound: Update to 1.10.0.Vincent Legoll
* gnu/packages/dns.scm (unbound): Update to 1.10.0. Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-03-07gnu: ppp: Update to 2.4.8-1.8d45443 [fixes CVE-2020-8597].Vincent Legoll
* gnu/packages/samba.scm (ppp): Update to 2.4.8-1.8d45443. Use GIT-FETCH and GIT-FILE-NAME. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-03-07gnu: Use HTTPS for commons.apache.org home pages.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-commons-io, java-commons-logging-minimal) (java-commons-math3, java-commons-jxpath, java-commons-daemon) (java-commons-net, java-commons-vfs, java-commons-beanutils) (java-commons-lang, java-commons-lang3)[home-page]:Use HTTPS.
2020-03-07gnu: java-joda-convert: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-joda-convert)[home-page]: Use HTTPS.
2020-03-07gnu: java-log4j-1.2-api: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-log4j-1.2-api)[home-page]: Use HTTPS.
2020-03-07gnu: java-testng: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-testng)[home-page]: Use HTTPS.
2020-03-07gnu: java-junit: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-junit)[home-page]: Use HTTPS.
2020-03-07gnu: java-openchart2: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-openchart2)[home-page]: Use HTTPS.
2020-03-07gnu: raincat: Update home page.Tobias Geerinckx-Rice
* gnu/packages/haskell-apps.scm (raincat)[home-page]: Update.
2020-03-07gnu: instantmusic: Update home page.Tobias Geerinckx-Rice
* gnu/packages/music.scm (instantmusic)[home-page]: Update.
2020-03-07gnu: openblas: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (openblas)[home-page]: Use HTTPS.
2020-03-07gnu: python-execnet: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/python-xyz.scm (python-execnet)[home-page]: Use HTTPS.
2020-03-07gnu: emacs-ffap-rfc-space: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/emacs-xyz.scm (emacs-ffap-rfc-space)[home-page]: Use HTTPS.
2020-03-07gnu: librecad: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/engineering.scm (librecad)[home-page]: Use HTTPS.
2020-03-07gnu: spice: Update to 0.14.3.Tobias Geerinckx-Rice
* gnu/packages/spice.scm (spice): Update to 0.14.3. [source]: Remove obsolete patch. * gnu/packages/patches/spice-fix-test-armhf.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-03-07gnu: xfce4-weather-plugin: Update to 0.10.1.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (xfce4-weather-plugin): Update to 0.10.1.
2020-03-07gnu: xfce4-clipman-plugin: Update to 1.4.4.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (xfce4-clipman-plugin): Update to 1.4.4.
2020-03-07gnu: xfce4-clipman-plugin: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (xfce4-clipman-plugin)[source]: Hard-code NAME.
2020-03-07gnu: fmt: Switch back to url-fetch.Pierre Neidhardt
* gnu/packages/pretty-print.scm (fmt)[source]: Use url-fetch instead of git-fetch since upstream uploads releases. Both approaches produce the same package, but git-fetch requires more bandwidth.
2020-03-07gnu: cl-dbus: Remove unneeded inputs.Pierre Neidhardt
* gnu/packages/lisp-xyz.scm (cl-dbus)[propagated-inputs]: Remove iolib subpackages now that iolib properly references them.
2020-03-07gnu: sbcl-iolib: Fix build to refer to its subpackages properly.Pierre Neidhardt
* gnu/packages/lisp-xyz.scm (sbcl-iolib): Inherit from its subpackages instead of the other way around, so that they are automatically referenced in the generated .asd.
2020-03-06gnu: go-golang.org-x-sync-errgroup: Fix spelling of "cancellation".Vagrant Cascadian
* gnu/packages/golang (go-golang.org-x-sync-errgroup)[synopsis]: Fix typo.
2020-03-06gnu: rust-named-pipe-0.4: Fix spelling of "asynchronous"Vagrant Cascadian
* gnu/packages/crates-io (rust-named-pipe-0.4)[synopsis]: Fix typo. [description]: Fix typo.
2020-03-06gnu: r-d3network: Fix typo "This package".Vagrant Cascadian
* gnu/packages/cran (r-d3network)[description]: Fix typo.
2020-03-06gnu: ksystemlog: Fix spelling of "occurring".Vagrant Cascadian
* gnu/packages/kde-sytemtools (ksystemlog)[description]: Fix typo.
2020-03-06gnu: unicode-cldr-common: Fix spelling of "information".Vagrant Cascadian
* gnu/packages/unicode (unicode-cldr-common)[description]: Fix typo.
2020-03-06gnu: sdl-pango: Rename patch to fix guix lint warning about patch filename size.Vagrant Cascadian
* gnu/packages/patches/sdl-pango-fix-explicit-SDLPango_CopyFTBitmapToSurface.patch: Rename to ... * gnu/packages/patches/sdl-pango-fix-explicit-SDLPango_CopyFTBitmapTo.patch: ... this. * gnu/local.mk: Update accordingly. * gnu/packages/sdl.scm: Update accordingly.
2020-03-06gnu: akonadi: Rename patch to fix guix lint warning about patch filename size.Vagrant Cascadian
* gnu/packages/patches/akonadi-Revert-Make-installation-properly-relocatabl.patch: Rename to ... * gnu/packages/patches/akonadi-Revert-Make-installation-properly-relo.patch: ... this. * gnu/packages/kde-pim (akonadi) Update accordingly. * gnu/local.mk: Update accordingly.
2020-03-07gnu: yasm: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/assembly.scm (yasm)[home-page]: Use HTTPS.
2020-03-07gnu: jq: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/web.scm (jq)[home-page]: Use HTTPS.
2020-03-07gnu: xerces-c: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/xml.scm (xerces-c)[home-page]: Use HTTPS.
2020-03-07gnu: ytalk: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (ytalk)[home-page]: Use HTTPS.
2020-03-07gnu: re2c: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/re2c.scm (re2c)[home-page]: Use HTTPS.
2020-03-07gnu: zimg: Update to 2.9.3.Tobias Geerinckx-Rice
* gnu/packages/image.scm (zimg): Update to 2.9.3.
2020-03-07gnu: bluefish: Update to 2.2.11.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (bluefish): Update to 2.2.11. [inputs]: Replace python-2 with python-wrapper.
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