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2023-06-08gnu: blis: Update to 0.9.0....* gnu/packages/maths.scm (blis): Update to 0.9.0. [arguments]: Use G-expression; remove trailing #T from build phases. Ricardo Wurmus
2023-06-08gnu: Add python-confection....* gnu/packages/python-xyz.scm (python-confection): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-srsly....* gnu/packages/python-xyz.scm (python-srsly): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-pubmed-parser....* gnu/packages/python-xyz.scm (python-pubmed-parser): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-duckdb....* gnu/packages/python-xyz.scm (python-duckdb): New variable. Ricardo Wurmus
2023-06-08gnu: python-pyarrow: Include dataset support....* gnu/packages/databases.scm (python-pyarrow)[arguments]: Remove obsolete build phase 'make-git-checkout-writable; rename phase 'set-PYARROW_WITH_PARQUET to 'set-pyarrow-build-options and also enable building of dataset extension. Ricardo Wurmus
2023-06-07gnu: conky: Update to 1.19.2....* gnu/packages/conky.scm (conky): Update to 1.19.2. Pierre Neidhardt
2023-06-07gnu: sbcl-cl-webkit: Update to 3.5.9....* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 3.5.9. Pierre Neidhardt
2023-06-07gnu: python-flit: Update to 3.8.0....* gnu/packages/python-xyz.scm (python-flit): Update to 3.8.0. [build-system]: Use pyproject-build-system. [arguments]: Run tests, but disable those that need networking; remove custom 'build phase; remove custom 'install phase; replace custom 'check phase with new 'pre-check phase. Ricardo Wurmus
2023-06-07gnu: Add python-clickhouse-connect....* gnu/packages/python-xyz.scm (python-clickhouse-connect): New variable. Ricardo Wurmus
2023-06-07gnu: sbcl: fix build on riscv64-linux....* gnu/packages/patches/sbcl-riscv-Make-contribs-build-again.patch: New file. * gnu/local.mk(dist_patch_DATA): register it. * gnu/packages/lisp.scm (sbcl): [source]<patches>: Use it here. Zheng Junjie
2023-06-07Revert "gnu: sbcl: fix build on riscv64-linux."...This reverts commit 2a6d2fc1d8e3434e283d6d2e559529b41a242fea. Efraim Flashner
2023-06-07gnu: sbcl: fix build on riscv64-linux....* gnu/packages/patches/sbcl-riscv-Make-contribs-build-again.patch: New file. * gnu/local.mk(dist_patch_DATA): register it. * gnu/packages/lisp.scm (sbcl): [source]<patches>: Use it here. Efraim Flashner
2023-06-07gnu: Sort use-module alphabetically in (gnu packages python-xyz)....* gnu/packages/python-xyz.scm: Sort use-module alphabetically to ease maintenance. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Sharlatan Hellseher
2023-06-07gnu: Delete duplicated use-module from (gnu package python-xyz)....* gnu/packages/python-xyz.scm: Delete duplicated (gnu packages serialization). Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Sharlatan Hellseher
2023-06-07gnu: python-can: Simplify package style....* gnu/package/python-xyz.scm (python-can): Simplify package style. [build-system]: Use pyproject-build-system. [argument]: Use Gexp. Remove redundant modify-phases procedure. Add {test-flags}. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Sharlatan Hellseher
2023-06-07gnu: python-can: Update to 4.2.0....* gnu/packages/python-xyz.scm (python-can): Update to 4.2.0. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Sharlatan Hellseher
2023-06-07gnu: hdf4: Add support for riscv64-linux....* gnu/packages/maths.scm (hdf4)[arguments]: Rename custom phase 'add-more-aarch64-support to 'add-more-architecture-support and add support for riscv64-linux. * gnu/packages/patches/hdf4-architectures.patch: Refresh from upstream. Efraim Flashner
2023-06-07gnu: fltk: Update source uri....* gnu/packages/fltk.scm (fltk)[source]: Update source URI to follow redirect. Efraim Flashner
2023-06-07gnu: fltk: Update to 1.3.8....* gnu/packages/fltk.scm (fltk): Update to 1.3.8. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Andy Tai
2023-06-06gnu: openconnect: Update to 9.12....* gnu/packages/vpn.scm (openconnect): Update to 9.12. Maxim Cournoyer
2023-06-06gnu: openconnect: Fix indentation, remove input labels and use gexps....* gnu/packages/vpn.scm (openconnect): Fix indentation. [native-inputs, inputs, propagated-inputs]: Remove input labels. [arguments]: Use gexps. Maxim Cournoyer
2023-06-06gnu: wxwidgets: Add libxtst to inputs....WxWidgets was already built with XTest support, but mostly by luck, via propagation of libxtst from GTK's propagated at-spi2-core package. Make it an explicit input. * gnu/packages/wxwidgets.scm (wxwidgets) [inputs]: Add libxtst. Maxim Cournoyer
2023-06-06gnu: sonnet: Add support for aspell dictionaries....* gnu/packages/kde-frameworks.scm (sonnet)[inputs]: Add aspell. Efraim Flashner
2023-06-06gnu: kirigami-addons: Update to 0.8.0....* gnu/packages/kde.scm (kirigami-addons): Update to 0.8.0. [source]: Download using git-fetch. Efraim Flashner
2023-06-06gnu: Add python-decoupler-py....* gnu/packages/bioinformatics.scm (python-decoupler-py): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>. Navid Afkhami
2023-06-06gnu: icecat: Update to 102.12.0-guix0-preview1 [security fixes]....Includes fixes for CVE-2023-34414 and CVE-2023-34416. * gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. Mark H Weaver
2023-06-06gnu: nim: Update to 1.6.12....Without the attached patch, Nim is broken on Guix as it searches for its stdlib in /lib while it was placed in /lib/nim. * gnu/packages/nim.scm (nim): Update to 1.6.12. [arguments]: In 'patch-installer phase install stdlib source to the right directory. In 'patch-more-shebangs phase edit substitute* to point to the new osproc source. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Gruruya
2023-06-06services: Check if service is #f before applying clause....* gnu/services.scm (apply-clauses): Check if service is #f before trying to apply clause. Follow up of 181951207339508789b28ba7cb914f983319920f. Josselin Poiret
2023-06-06gnu: python-anaconda-client: Fix build with Python 3.10....* gnu/packages/package-management.scm (python-anaconda-client)[build-system]: Use pyproject-bulid-system. [arguments]: Move contents of 'remove-network-tests phase to #:test-flags; drop trailing #T from 'set-HOME phase; add phase 'python3.10-compatibility; disable test_conda_root and test_conda_root_outside_root_environment. Ricardo Wurmus
2023-06-06gnu: Add r-caretensemble....* gnu/packages/cran.scm (r-caretensemble): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami
2023-06-06services: 'modify-services' preserves service ordering....Fixes <https://issues.guix.gnu.org/63921>. The regression was introduced in dbbc7e946131ba257728f1d05b96c4339b7ee88b, which changed the order of services. As a result, someone using 'modify-services' could find themselves with incorrect ordering of expressions in the "boot" script, whereby the cleanup expressions would come after (execl ".../shepherd"). This, in turn, would lead shepherd to error out at boot with EADDRINUSE on /var/run/shepherd/socket. * gnu/services.scm (%delete-service, %apply-clauses): Remove. (clause-alist): New macro. (apply-clauses): New procedure. (modify-services): Use it. Adjust docstring. * tests/services.scm ("modify-services: do nothing"): Remove 'sort' call. ("modify-services: delete service"): Likewise, and add 't4' service. ("modify-services: change value"): Remove 'sort' call and fix expected value. Ludovic Courtès
2023-06-06records: Use SRFI-11 instead of SRFI-71, for Guile 2.0 compatibility....This fixes a failure of 'tests/packages.scm' introduced in b88e38d4b51b9aa0e857baeb614c000e491ad309: some of the tests import (guix records) on the build side, which uses '%bootstrap-guile' (Guile 2.0) where SRFI-71 is unavailable. * guix/records.scm (match-record-inner): Use SRFI-11 instead of SRFI-71. Ludovic Courtès
2023-06-06doc: Add missing node to the main menu....This is a followup to 110462bb2f1678fb0147a5845b2b48d0566ce0b4. * doc/guix.texi (Top): Add "Mail Home Services" to the menu. Ludovic Courtès
2023-06-06gnu: sbcl-stmx: Update to 2.0.5-2.f71e742....* gnu/packages/lisp-xyz.scm (sbcl-stmx): Update to 2.0.5-2.f71e742. [arguments]: Add 'fix-build' phase. Guillaume Le Vaillant
2023-06-06gnu: txr: Update to 287....* gnu/packages/lisp.scm (txr): Update to 287. Guillaume Le Vaillant
2023-06-06gnu: sbcl: Update to 2.3.5....* gnu/packages/lisp.scm (sbcl): Update to 2.3.5. Guillaume Le Vaillant
2023-06-06gnu: openocd: Update to 0.12.0....* gnu/packages/embedded.scm (openocd): Update to 0.12.0. [inputs]: Remove libusb-compat as openocd dropped support for libusb0. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Jean-Pierre De Jesus DIAZ
2023-06-06gnu: jimtcl: Update to 0.82....* gnu/packages/embedded (jimtcl): Update to 0.82. [arguments]: Use G-Expressions and update failing test, TTY test doesn't fail anymore. [inputs]: Add openssl as an input as now by default jimtcl enables the SSL configuration option. * gnu/packages/embedded (openocd): Support jimtcl 0.82. [arguments]: Link against libssl and libcrypto. [inputs]: Add openssl. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Jean-Pierre De Jesus DIAZ
2023-06-06gnu: libjaylink: Update to 0.3.1....* gnu/packages/embedded (libjaylink): Update to 0.3.1. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Jean-Pierre De Jesus DIAZ
2023-06-06gnu: thc-ipv6: Do not build with "-march=native"....* gnu/packages/networking.scm (thc-ipv6)[origin]: Add 'snippet'. [properties]: New field. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Z572
2023-06-05gnu: linux-libre 5.4: Update to 5.4.245....* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.245. (linux-libre-5.4-pristine-source): Update hash. Leo Famulari
2023-06-05gnu: linux-libre 5.10: Update to 5.10.182....* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.182. (linux-libre-5.10-pristine-source): Update hash. Leo Famulari
2023-06-05gnu: linux-libre 5.15: Update to 5.15.115....* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.115. (linux-libre-5.15-pristine-source): Update hash. Leo Famulari
2023-06-05gnu: linux-libre 6.1: Update to 6.1.32....* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.32. (linux-libre-6.1-pristine-source): Update hash. Leo Famulari
2023-06-05gnu: linux-libre: Update to 6.3.6....* gnu/packages/linux.scm (linux-libre-6.3-version): Update to 6.3.6. (linux-libre-6.3-pristine-source): Update hash. Leo Famulari
2023-06-05gnu: blurhash: Update to 0.2.0....* gnu/packages/image.scm (blurhash): Update to 0.2.0. [native-inputs]: Remove cmake. Add pkg-config. Efraim Flashner
2023-06-05gnu: cpp-httplib: Update to 0.12.5....* gnu/packages/cpp.scm (cpp-httplib): Update to 0.12.5. [arguments]: Adjust configure-flags to build the tests. Add a make-flag to set CXX. Adjust custom 'disable-network-tests phase to skip more network tests. Remove custom 'check phase. [native-inputs]: Add googletest. Efraim Flashner
2023-06-05doc: Fix some typos in the manual....* doc/guix.texi (Invoking guix pull): Correct followings to following. (Using Guix Interactively): Correct expresssion to expression. (Base Services): Correct overriden to overridden. (Audio Services): Correct Supress to Suppress. (Setuid Programs): Correct goup to group. (Essential Home Services): Correct apropiate to appropriate, similiar to similar. (Messaging Home Services): Correct seperately to separately. (image Reference): Correct instanciated to instantiated. (Full-Source Bootstrap): Correct udpate to update, Frome to From. Efraim Flashner
2023-06-05gnu: python-codespell: Update to 2.2.4....* gnu/packages/python-xyz.scm (python-codespell): Update to 2.2.4. [build-system]: Switch to pyproject-build-system. [native-inputs]: Remove python-check-manifest; add python-pygments and python-tomli. Efraim Flashner