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* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.14.
(linux-libre-5.11-pristine-source): Update hash.
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Fixes <https://bugs.gnu.org/44593>.
* guix/git.scm (update-submodules): Add #:fetch-options and honor it.
(update-cached-checkout): Pass #:fetch-options to 'update-submodules'.
* doc/guix.texi (Requirements): Adjust comment about Guile-Git.
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* gnu/installer/steps.scm (configuration->file): Pass the comment in the
generated file through 'G_'.
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Fixes <https://bugs.gnu.org/42129>.
* etc/guix-install.sh (sys_create_build_user): If a 'kvm' group exists,
add it to the guixbuilders' lists of supplementary groups.
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* gnu/packages/shells.scm (oil): Update to 0.8.9.
[arguments]: Make the 'check' phase return #t.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/bioinformatics.scm (cwltool): Update to 3.0.20210319143721.
[arguments]: In the loosen-version-restrictions phase, relax pytest version
restriction. In the modify-tests phase, delete file tests/test_content_type.py
since it contains tests that require network access.
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* gnu/packages/bioinformatics.scm (python-schema-salad): Update to
7.1.20210316164414.
[arguments]: Add skip-failing-tests phase.
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* gnu/packages/ci.scm (cuirass): Update to 1.0.0-11.922cc66.
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* gnu/packages/openstack.scm (python-stevedore)[native-inputs]: Move
python-pbr from here...
[propagated-inputs]: ...to here.
[arguments]: Add phase to patch requirements.
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* gnu/packages/python-xyz.scm (python-ld): New variable.
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This is a follow-up of c311147bd16aa0e5746d9cbf31502f5fd61e470c.
* gnu/services/cuirass.scm (%cuirass-default-database): Use "/tmp" database
host.
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* gnu/packages/ci.scm (cuirass): Update to 1.0.0-10.17e8759.
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* gnu/packages/tex.scm: New package.
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* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.4.
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* gnu/packages/flashing-tools.scm (srecord): New variable.
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* gnu/packages/games.scm (minetest)[patch-sources]: Substitute '/bin/rm' path.
[inputs]: Add coreutils.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
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Fixes <https://bugs.gnu.org/46829>.
* gnu/packages/package-management.scm (guix): Update to 1.2.0-21.4dff6ec.
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This reverts commit f3626119d738f30b5ab59e76c105fd7b4c077ddc.
This commit inadvertently broke a string freeze. Let's be nice to our
translators and not do that.
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* gnu/packages/guile.scm (guile-git): Update to 0.5.0.
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* gnu/packages/emacs-xyz.scm (emacs-git-link): Update to 0.8.3.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/certs.scm (le-certs): Update the certificate store.
[inputs]: Add isrgrootx2.pem, letsencryptauthorityr3.pem,
letsencryptauthorityr4.pem, letsencryptauthoritye1.pem, and
letsencryptauthoritye2.pem. Remove letsencryptauthorityx3.pem and
letsencryptauthorityx4.pem.
[arguments]: Adjust the builder accordingly.
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This is a follow-up of c311147bd16aa0e5746d9cbf31502f5fd61e470c.
* gnu/tests/databases.scm (run-postgresql-test): Use "/tmp" as database host.
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This is a follow-up of c311147bd16aa0e5746d9cbf31502f5fd61e470c.
* gnu/services/databases.scm (<postgresql-role-configuration>)[host]: Set to
"/tmp" which the default Postgresql socket directory.
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* gnu/services/databases.scm (mysql-configuration): Add extra-environment
(mysql-service): Use #:log-file and #:environment-variables
* doc/guix.texi: Document it.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
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* gnu/packages/cran.scm (r-randomforestsrc): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* po/guix/LINGUAS: Add 'sk'.
* po/guix/sk.po: New file.
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* gnu/packages/vpn.scm (openconnect-sso): Update to 0.7.2.
[arguments]: Remove 'adjust-package-version-requirements phase.
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* gnu/packages/cran.scm (r-hmm): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/python-web.scm (python-tinycss2)[source]: Fetch from git
repository to include tests.
[arguments]: Build from source with flit.
[native-inputs]: Add python-flit, python-pytest, python-pytest-cov,
python-pytest-flake8, and python-pytest-isort.
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* gnu/packages/python-xyz.scm (python-ipywidgets): Update to 7.6.3.
[propagated-inputs]: Add python-ipython, python-jupyterlab-widgets, and
python-nbformat.
[native-inputs]: Remove python-nose; add python-mock and ptyhon-pytest-cov.
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* gnu/packages/python-xyz.scm (python-widgetsnbextension)[propagated-inputs]:
Remove python-argon2-cffi, python-ipykernel, and python-terminado.
[native-inputs]: Remove python-certifi and python-nose.
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* gnu/packages/jupyter.scm (python-jupyterlab-widgets): New variable.
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* gnu/packages/jupyter.scm (python-jupyter-packaging): New variable.
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* gnu/packages/python-xyz.scm (python-deprecation): New variable.
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* gnu/packages/check.scm (python-testpath): Update to 0.4.4.
[arguments]: Build the package as intended with flit.
[native-inputs]: Add python-flit.
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* gnu/packages/python-xyz.scm (python-flit): Update to 3.2.0.
[source]: Fetch from git repository to include flit_core.
[arguments]: Add phases to bootstrap the build.
[propagated-inputs]: Add python-pytoml and python-toml.
[native-inputs]: Add python-docutils, python-responses,
python-pygments-github-lexers, python-pytest, python-pytest-cov,
python-sphinx, python-sphinxcontrib-github-alt, and python-testpath.
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* gnu/packages/sphinx.scm (python-sphinxcontrib-github-alt): New variable.
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* gnu/packages/python-web.scm (python-requests-unixsocket): New variable.
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* gnu/packages/python-xyz.scm (python-pygments-github-lexers): New variable.
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* gnu/packages/python-build.scm (python-pytoml): New variable.
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* gnu/packages/python-xyz.scm (python2-ipykernel): Remove variable.
(python-ipykernel)[properties]: Remove python2-variant.
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* gnu/packages/python-xyz.scm (python2-jupyter-console): Remove variable.
(python-jupyter-console)[properties]: Remove python2-variant.
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* gnu/packages/python-xyz.scm (python2-jupyter-core): Remove variable.
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* gnu/packages/python-xyz.scm (python2-ipyparallel): Remove variable.
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* gnu/packages/python-xyz.scm (python2-matplotlib-documentation): Remove variable.
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* gnu/packages/python-xyz.scm (python-nbformat): Update to 5.1.3.
[arguments]: Remove to enable tests.
[native-inputs]: Add python-pytest.
[properties]: Add python2-variant.
(python2-nbformat): Keep at version 4.4.0; override version and source field.
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* gnu/packages/python-xyz.scm (python-nbconvert): Update to 6.0.7.
[arguments]: Remove configure flags, enable tests, override check phase.
[propagated-inputs]: Add python-defusedxml, python-nbclient,
python-pandocfilters, python-jupyterlab-pygments, and python-testpath.
[properties]: Add python2-variant.
(python2-nbconvert): Override version, source, arguments, and
propagated-inputs.
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* gnu/packages/jupyter.scm (python-nbclient): New variable.
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* gnu/packages/jupyter.scm (python-jupyterlab-pygments): New variable.
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* gnu/packages/python-xyz.scm (python-nest-asyncio): New variable.
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