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2023-07-17gnu: r-sf: Update to 1.0-14.Ricardo Wurmus
* gnu/packages/cran.scm (r-sf): Update to 1.0-14. [inputs]: Add curl, openssh, openssl, pcre2, and zlib.
2023-07-17gnu: r-longdat: Update to 1.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-longdat): Update to 1.1.2.
2023-07-17gnu: r-tidytree: Update to 0.4.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidytree): Update to 0.4.4.
2023-07-17gnu: r-rcppalgos: Update to 2.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppalgos): Update to 2.8.0.
2023-07-17gnu: r-doby: Update to 4.6.17.Ricardo Wurmus
* gnu/packages/cran.scm (r-doby): Update to 4.6.17.
2023-07-17gnu: r-ctrdata: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ctrdata): Update to 1.14.0. [propagated-inputs]: Add r-dplyr.
2023-07-17gnu: r-rcppspdlog: Update to 0.0.14.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.14.
2023-07-17gnu: r-gensa: Update to 1.1.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-gensa): Update to 1.1.9.
2023-07-17gnu: r-sass: Update to 0.4.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-sass): Update to 0.4.7.
2023-07-17gnu: r-ggpp: Update to 0.5.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.3.
2023-07-17gnu: r-babelwhale: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-babelwhale): Update to 1.2.0.
2023-07-17gnu: r-openssl: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-openssl): Update to 2.1.0. [properties]: Add hint to keep openssl input. [inputs]: Add zlib.
2023-07-17scripts/refresh: Remove column from spec line before sorting.Ricardo Wurmus
We want to sort by file and line number, but the column number messes everything up. This is a follow-up to commit b43841c124d15eaecc41b3928f08a26dbd5c653a. * guix/scripts/refresh.scm (guix-refresh): Trim the digits on the right of the location string before comparing them.
2023-07-17gnu: simulation: Fix duplicate open-simulation-interface.Christopher Baines
Give the python variant a different name, and fix the build. * gnu/packages/simulation.scm (python-open-simulation-interface)[name]: Set. [propagated-inputs]: Add python-pyyaml and python-protobuf.
2023-07-17gnu: gnome: Hide devhelp-with-libsoup2.Christopher Baines
To avoid the ambiguous package specification. * gnu/packages/gnome.scm (devhelp-with-libsoup2): Hide package.
2023-07-17gnu: Hide python-bcbio-gff/biopython-1.73.Christopher Baines
To avoid the ambiguous package specification. * gnu/packages/bioinformatics.scm (python-bcbio-gff/biopython-1.73): Hide package.
2023-07-17gnu: Remove harfbuzz-5.Christopher Baines
As this package definition is redundant, harfbuzz is version 5.3.1. * gnu/packages/gtk.scm (harfbuzz-5): Remove. * gnu/packages/libreoffice.scm (libreoffice)[inputs]: Replace harfbuzz-5 with harfbuzz. * gnu/packages/qt.scm (qtwebengine)[inputs]: Remove redundant replace.
2023-07-17teams: Change email address for Christopher Baines.Christopher Baines
This will allow me to automatically detect when I'm getting emails related to Guix teams. * etc/teams.scm.in: Change email address for Christopher Baines.
2023-07-17gnu: ghc-8.10: Fix build on i686-linux.Christopher Baines
As one profiling test fails very repeatedly on the bordeaux build farm, but ghc did seem to build successfully on other machines. * gnu/packages/haskell.scm (ghc-8.10)[arguments]: Don't run the T11627a profiling test on i686-linux.
2023-07-17gnu: jbr: Use Jetbrains' configure-flags.Danny Milosavljevic
* gnu/packages/java.scm (jbr17)[arguments]<#:configure-flags>: Use Jetbrains' configure flags.
2023-07-16gnu: welle-io: Add missing input.Guillaume Le Vaillant
* gnu/packages/radio.scm (welle-io)[inputs]: Add qtquickcontrols-5.
2023-07-16gnu: libnode: Delete extra phase.Ricardo Wurmus
This is a follow-up to commit 5dc2a88f99e2e448f7e9ca842a4a0d072a8f8f20. * gnu/packages/node.scm (libnode)[arguments]: Remove phase 'ignore-number-of-hardlinks.
2023-07-16gnu: r-with-tests: Update to 4.3.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-with-tests): Update to 4.3.1.
2023-07-16gnu: r-with-tests: Fix reference to grep.Ricardo Wurmus
detectCores.R fails to return the number of cores when running R in a container without grep. Reported-by: Jonas Freimuth. * gnu/packages/statistics.scm (r-with-tests)[arguments]: Fix references to grep and wc in detectCores.R. [inputs]: Add grep.
2023-07-16gnu: capypdf: Update to 0.4.0.Liliana Marie Prikler
* gnu/packages/pdf.scm (capypdf): Update to 0.4.0.
2023-07-16gnu: mesa: Fix Vulkan on older Intel GPUs.Lilah Tascheter
Mesa split the Vulkan intel driver into two: intel and intel_hasvk. Enables intel_hasvk so vulkan functions on older intel GPUs again, and swrast for lavapipe as a fallback. * gnu/packages/gl.scm (mesa-vulkan-hasvk): New variable. (mesa): Graft with mesa-vulkan-hasvk. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-07-16gnu: Add emacs-weyland-yutani-theme.Ahmad Draidi
* gnu/packages/emacs-xyz.scm (emacs-weyland-yutani-theme): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-07-16gnu: Add emacs-elfeed-goodiesBrian Cully
* gnu/packages/emacs-xyz.scm (emacs-elfeed-goodies): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-07-16gnu: Add emacs-popwin.Brian Cully
* gnu/packages/emacs-xyz.scm (emacs-popwin): new variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-07-16gnu: Add python-ovh.Liliana Marie Prikler
* gnu/packages/python-web.scm (python-ovh): New variable.
2023-07-09gnu: wimlib: Update to 1.14.1.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (wimlib): Update to 1.14.1. [inputs]: Upgrade fuse to fuse-3.
2023-07-09gnu: qpwgraph: Update to 0.4.5.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (qpwgraph): Update to 0.4.5.
2023-07-09gnu: rdiff-backup: Update to 2.2.5.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (rdiff-backup): Update to 2.2.5.
2023-07-09gnu: snapraid: Update to 12.2.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid): Update to 12.2.
2023-07-09gnu: oath-toolkit: Mark up description.Tobias Geerinckx-Rice
* gnu/packages/authentication.scm (oath-toolkit)[synopsis, description]: Use @acronym{}.
2023-07-09gnu: oath-toolkit: Update to 2.6.9.Tobias Geerinckx-Rice
* gnu/packages/authentication.scm (oath-toolkit): Update to 2.6.9. [source]: Remove patch. * gnu/packages/patches/oath-toolkit-xmlsec-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2023-07-09gnu: stoken: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/crypto.scm (stoken)[home-page]: Use HTTPS.
2023-07-09gnu: Remove top-level (guix build utils) import.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm: Don't import (guix build utils) here.
2023-07-09gnu: signify: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/crypto.scm (signify)[arguments]: Rewrite as G-expressions.
2023-07-09gnu: signify: Update to 31.Tobias Geerinckx-Rice
* gnu/packages/crypto.scm (signify): Update to 31.
2023-07-09gnu: libxcrypt: Update to 4.4.36.Tobias Geerinckx-Rice
* gnu/packages/crypto.scm (libxcrypt): Update to 4.4.36.
2023-07-09gnu: xtl: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/cpp.scm (xtl)[arguments]: Rewrite as G-expressions.
2023-07-09gnu: xtl: Update to 0.7.5.Tobias Geerinckx-Rice
* gnu/packages/cpp.scm (xtl): Update to 0.7.5.
2023-07-09guix-install.sh: Remove any old systemd units first.Tobias Geerinckx-Rice
Don't clobber /dev/null permissions if units are masked. * etc/guix-install.sh (sys_enable_guix_daemon): Factor out unit installation. Unconditionally remove any old units. Install and enable gnu-store.mount after guix-daemon.service.
2023-07-09guix-install.sh: Don't patch guix-daemon.service.Tobias Geerinckx-Rice
* etc/guix-install.sh (sys_enable_guix_daemon): Remove obsolete sed invocations.
2023-07-09guix-install.sh: Unconditionally install gnu-store.mount.Tobias Geerinckx-Rice
* etc/guix-install.sh (sys_enable_guix_daemon): Remove obsolete conditional.
2023-07-15gnu: Add linux-libre 6.4Leo Famulari
* gnu/packages/linux.scm (linux-libre-6.4-version, linux-libre-6.4-gnu-revision, deblob-scripts-6.4, linux-libre-6.4-pristine-source, linux-libre-6.4-source, linux-libre-headers-6.4, linux-libre-6.4: New variables. * gnu/packages/aux-files/linux-libre/6.4-arm.conf, * gnu/packages/aux-files/linux-libre/6.4-arm64.conf, * gnu/packages/aux-files/linux-libre/6.4-i686.conf, * gnu/packages/aux-files/linux-libre/6.4-x86_64.conf: New files. * Makefile.am (AUX_FILES): Add them.
2023-07-15gnu: python-distributed: Update to 2023.7.0.Ricardo Wurmus
* gnu/packages/python-science.scm (python-distributed): Update to 2023.7.0.
2023-07-15gnu: python-dask: Update to 2023.7.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-dask): Update to 2023.7.0.
2023-07-15gnu: r-pando: Relax requirements.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-pando)[arguments]: Patch DESCRIPTION file.
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