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2020-10-06gnu: r-bgx: Update to 1.54.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.54.1.
2020-10-06gnu: r-xcms: Update to 3.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.10.2.
2020-10-06gnu: r-atacseqqc: Update to 1.12.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.12.5.
2020-10-06gnu: r-gosemsim: Update to 2.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.14.2.
2020-10-06gnu: r-karyoploter: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.14.1.
2020-10-06gnu: r-diffbind: Update to 2.16.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.16.2.
2020-10-06gnu: sbcl-cl-base64: Declare a source file-name.Efraim Flashner
* gnu/packages/lisp-xyz.scm (sbcl-cl-base64)[source]: Add file-name field.
2020-10-06gnu: memkind: Declare a source file-name.Efraim Flashner
* gnu/packages/disk.scm (memkind)[source]: Add file-name field.
2020-10-06gnu: python-tox: Update to 3.20.0.Joseph LaFreniere
* gnu/packages/python-xyz.scm (python-tox): Update to 3.20.0. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: Add emacs-python-black.Joseph LaFreniere
* gnu/packages/emacs-xyz.scm (emacs-python-black): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: Add python-black-macchiato.Joseph LaFreniere
* gnu/packages/python-xyz.scm (python-black-macchiato): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: zrythm: Update to 1.0.0-alpha.3.0.1.Alexandros Theodotou
* gnu/packages/music.scm (zrythm): Update to 1.0.0-alpha.3.0.1. [arguments]: Explicitly enable RtMidi support in #:configure-flags. <phases>: Remove xdg-open patch (no longer needed). Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: stockfish: Fix typo in description.Tobias Geerinckx-Rice
* gnu/packages/games.scm (stockfish)[description]: Fix typo.
2020-10-06gnu: libbpf: Fix erroneous use of DESTDIR.Tobias Geerinckx-Rice
It broke the pkg-config file and is almost always a mistake. * gnu/packages/linux.scm (libbpf)[arguments]: Correctly set PREFIX.
2020-10-06build: svn: Handle fetch errors.zimoun
* guix/build/svn.scm (svn-fetch): Add 'guard' to handle errors. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06build: hg: Handle fetch errors.zimoun
* guix/build/hg.scm (hg-fetch): Add 'guard' to handle errors. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: chatty: Update to 0.1.16.Michael Rohleder
* gnu/packages/messaging.scm (chatty): Update to 0.1.16. [inputs]: Add gsettings-desktop-schemas. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: emacs-dtrt-indent: Update to 1.2.Joseph LaFreniere
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): Update to 1.2. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: emacs-helpful: Update to 0.18.Michael Rohleder
* gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.18. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: Add memkind.Danny Milosavljevic
* gnu/packages/disk.scm (memkind): New variable.
2020-10-06images: Add pine64-barebones-raw-image.Mathieu Othacehe
* gnu/system/images/pine64.scm (pine64-barebones-raw-image): New variable. * gnu/ci.scm (%guix-system-images): Add it.
2020-10-06build-system/cargo: Don't install .crates.toml file.Efraim Flashner
Fixes <https://issues.guix.gnu.org/43810>. * guix/build/cargo-build-system.scm (install): Remove installed .crates.toml file.
2020-10-06gnu: emacs-ivy-posframe: Update to 0.5.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-ivy-posframe): Update to 0.5.0.
2020-10-06gnu: vlang: Correctly refer to output directories.Efraim Flashner
* gnu/packages/vlang.scm (vlang)[arguments]: In custom 'install phase correctly refer to 'outputs'.
2020-10-06gnu: vlang: Use cc-for-target.Efraim Flashner
* gnu/packages/vlang.scm (vlang)[arguments]: Don't hardcode gcc in make-flags. In custom 'patch-makefile, don't hardcode gcc.
2020-10-06services: dnsmasq: Add TFTP configuration fields.Danny Milosavljevic
* gnu/services/dns.scm (<dnsmasq-configuration>): Add TFTP configuration fields. (dnsmasq-shepherd-service): Use them. * doc/guix.texi (DNS Services): Document them.
2020-10-05gnu: lsh: Enable some tests.Maxim Cournoyer
* gnu/packages/ssh.scm (lsh)[native-inputs]: Add autoconf and automake. [arguments]: Remove #:tests? argument. [phases]{disable-failing-tests}: New phase.
2020-10-05gnu: lsh: Fix X11 forwarding.Maxim Cournoyer
Fixes <https://issues.guix.gnu.org/24049>. * gnu/packages/patches/lsh-fix-x11-forwarding.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/ssh.scm (lsh)[source]: Apply it. [inputs]: Add libxau. Reported-by: myglc2 <myglc2@gmail.com>
2020-10-06gnu: perl-cgi: Update to 4.51.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-cgi): Update to 4.51.
2020-10-06gnu: python-flake8: Update to 3.8.4.Tobias Geerinckx-Rice
* gnu/packages/python-xyz.scm (python-flake8): Update to 3.8.4.
2020-10-06gnu: seahorse: Update to 3.36.2.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (seahorse): Update to 3.36.2.
2020-10-06gnu: s6-portable-utils: Update to 2.2.3.0.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.3.0.
2020-10-06gnu: s6-dns: Update to 2.3.3.0.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (s6-dns): Update to 2.3.3.0.
2020-10-06gnu: obs: Update to 26.0.1.Tobias Geerinckx-Rice
* gnu/packages/video.scm (obs): Update to 26.0.1.
2020-10-06gnu: goffice: Update to 0.10.48.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (goffice): Update to 0.10.48.
2020-10-06gnu: spice-protocol: Update to 0.14.3.Tobias Geerinckx-Rice
* gnu/packages/spice.scm (spice-protocol): Update to 0.14.3.
2020-10-06gnu: Fix up package copyright headers.Tobias Geerinckx-Rice
2020-10-06gnu: libshout: Update to 2.4.4.Tobias Geerinckx-Rice
* gnu/packages/xiph.scm (libshout): Update to 2.4.4.
2020-10-06gnu: vlang: Run mosts tests.Tobias Geerinckx-Rice
* gnu/packages/vlang.scm (vlang)[arguments]: Enable tests and add a new ‘delete-failing-tests’ and custom ‘check’ phase. [native-inputs]: Add libx11, node, openssl, and sqlite.
2020-10-06gnu: vlang: Update to 0.1.29.Tobias Geerinckx-Rice
* gnu/packages/vlang.scm (vlang): Update to 0.1.29.
2020-10-06gnu: execline: Update to 2.6.1.1.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (execline): Update to 2.6.1.1.
2020-10-06gnu: skalibs: Update to 2.9.3.0.Tobias Geerinckx-Rice
* gnu/packages/skarnet.scm (skalibs): Update to 2.9.3.0.
2020-10-06gnu: libde265: Update to 1.0.7.Tobias Geerinckx-Rice
* gnu/packages/video.scm (libde265): Update to 1.0.7.
2020-10-06gnu: vim: Update to 8.2.1801.Tobias Geerinckx-Rice
* gnu/packages/vim.scm (vim): Update to 8.2.1801.
2020-10-06gnu: youtube-viewer: Update to 3.7.9.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-viewer): Update to 3.7.9. [inputs]: Add perl-memoize.
2020-10-06gnu: r-tclust: Update to 1.4-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tclust): Update to 1.4-2.
2020-10-06gnu: r-car: Update to 3.0-10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-car): Update to 3.0-10.
2020-10-06gnu: r-quantreg: Update to 5.73.Ricardo Wurmus
* gnu/packages/statistics.scm (r-quantreg): Update to 5.73.
2020-10-06gnu: r-fpc: Update to 2.2-8.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-8.
2020-10-06gnu: r-gplots: Update to 3.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gplots): Update to 3.1.0. [propagated-inputs]: Remove r-gdata.
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