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2020-03-13gnu: catdoc: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/textutils.scm (catdoc)[home-page]: Use HTTPS.
2020-03-12gnu: Add browserpass-native.Alex Griffin
* gnu/packages/password-utils.scm (browserpass-native): New variable.
2020-03-12gnu: Add go-github-com-mattn-go-zglob.Alex Griffin
* gnu/packages/golang.scm (go-github-com-mattn-go-zglob): New variable.
2020-03-12gnu: Add go-github-com-rifflock-lfshook.Alex Griffin
* gnu/packages/golang.scm (go-github-com-rifflock-lfshook): New variable.
2020-03-12gnu: go-github-com-sirupsen-logrus: Propagate inputs.Alex Griffin
* gnu/packages/golang.scm (go-github-com-sirupsen-logrus): Propagate inputs.
2020-03-12gnu: linux-libre: Update to 5.4.25.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.25. (linux-libre-5.4-pristine-source): Update hash.
2020-03-12gnu: linux-libre@4.19: Update to 4.19.109.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.109. (linux-libre-4.19-pristine-source): Update hash.
2020-03-12gnu: linux-libre@4.14: Update to 4.14.173.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.173. (linux-libre-4.14-pristine-source): Update hash.
2020-03-12gnu: linux-libre@4.9: Update to 4.9.216.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.216. (linux-libre-4.9-pristine-source): Update hash.
2020-03-12gnu: linux-libre@4.4: Update to 4.4.216.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.216. (linux-libre-4.4-pristine-source): Update hash.
2020-03-12gnu: mingw-w64-*: Update to 7.0.0.Carl Dong
* gnu/packages/mingw.scm (make-mingw-w64): Update to 7.0.0.
2020-03-12gnu: ghc-extra: Update to 1.7.1.Alexandru-Sergiu Marton
* gnu/packages/haskell-xyz.scm (ghc-extra): Update to 1.7.1. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-03-12weather: Allow for multiple '--manifest' options.Ludovic Courtès
* guix/scripts/weather.scm (guix-weather)[package-list]: Account for all the 'manifest entries in OPTS. * doc/guix.texi (Invoking guix weather): Document it.
2020-03-12weather: Add '--display-missing'.Ludovic Courtès
* guix/scripts/weather.scm (report-server-coverage): Add #:display-missing? and honor it. (show-help, %options): Add "--display-missing". (guix-weather): Pass #:display-missing? to 'report-server-coverage'. * doc/guix.texi (Invoking guix weather): Document it.
2020-03-12gnu: singularity: Do not use the "errors=remount-ro" squashfs option.Ludovic Courtès
This mount option stopped being supported with Linux-libre 5.4.5: http://ci.guix.gnu.org/build/2056359/details * gnu/packages/linux.scm (singularity)[source]: Remove "errors=remount-ro" mount option from source code.
2020-03-12gnu: singularity: Wrap programs so they find Coreutils.Ludovic Courtès
* gnu/packages/linux.scm (singularity)[arguments]: Add 'set-PATH' phase.
2020-03-12gexp: Add 'with-parameters'.Ludovic Courtès
* guix/gexp.scm (<parameterized>): New record type. (with-parameters): New macro. (compile-parameterized): New gexp compiler. * tests/gexp.scm ("with-parameters for %current-system") ("with-parameters for %current-target-system") ("with-parameters + file-append"): New tests. * doc/guix.texi (G-Expressions): Document it.
2020-03-12gnu: Add guile-torrent.Amar Singh
* gnu/packages/guile-xyz.scm (guile-torrent): New variable. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-03-12gnu: edirect: Update to 13.3.20200128.Efraim Flashner
* gnu/packages/bioinformatics.scm (edirect): Update to 13.3.20200128. [source]: Remove bundled certificate authority tarball.
2020-03-12gnu: r-car: Update to 3.0-7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-car): Update to 3.0-7. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-nloptr: Update to 1.2.2.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.2.1.
2020-03-12gnu: r-roxygen2: Update to 7.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.1.0. [native-inputs]: Move r-knitr from here... [propagated-inputs]: ...to here.
2020-03-12gnu: r-xml2: Update to 1.2.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.5. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-tam: Update to 3.4-26.Ricardo Wurmus
* gnu/packages/cran.scm (r-tam): Update to 3.4-26.
2020-03-12gnu: r-cdm: Update to 7.5-15.Ricardo Wurmus
* gnu/packages/cran.scm (r-cdm): Update to 7.5-15.
2020-03-12gnu: r-parameters: Update to 0.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-parameters): Update to 0.6.0. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-graphlayouts: Update to 0.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-graphlayouts): Update to 0.6.0.
2020-03-12gnu: r-ggfortify: Update to 0.4.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.9. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-ggplotify: Update to 0.0.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.5. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-pegas: Update to 0.13.Ricardo Wurmus
* gnu/packages/cran.scm (r-pegas): Update to 0.13.
2020-03-12gnu: r-spatialextremes: Update to 2.0-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatialextremes): Update to 2.0-8.
2020-03-12gnu: r-tidytree: Update to 0.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.2. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-rcppparallel: Update to 5.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.0.0.
2020-03-12gnu: r-sjplot: Update to 2.8.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.3. [propagated-inputs]: Remove r-forcats. [native-inputs]: Remove r-knitr.
2020-03-12gnu: r-catdap: Update to 1.3.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-catdap): Update to 1.3.5.
2020-03-12gnu: r-vim: Update to 5.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-vim): Update to 5.1.1.
2020-03-12gnu: r-vctrs: Update to 0.2.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.4. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-cicero: Update to 1.4.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.4. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-ggcyto: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.14.1. [native-inputs]: Add r-knitr.
2020-03-12gnu: r-mlinterfaces: Update to 1.66.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.5.
2020-03-12gnu: r-qtl: Update to 1.46-2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.46-2.
2020-03-12gnu: Add hyperledger-iroha.Pierre Neidhardt
This package was co-authored with Efraim Flashner <efraim@flashner.co.il> * gnu/packages/hyperledger.scm (hyperledger-iroha): New variable.
2020-03-12gnu: Add boost-1.69.Efraim Flashner
* gnu/packages/boost.scm (boost-1.69): New hidden package.
2020-03-12gnu: Add hyperledger-iroha-ed25519.Pierre Neidhardt
* gnu/packages/hyperledger.scm (hyperledger-iroha-ed25519): New variable.
2020-03-12gnu: grpc: Build shared libraries.Efraim Flashner
* gnu/packages/machine-learning.scm (grpc)[outputs]: Add static. [arguments]: Copy configure-flags from cmake-build-system. Add custom phases 'configure-shared, 'install-shared-libraries and 'move-static-libs to build shared libs and move static libs to their own output. (tensorflow)[native-inputs]: Add grpc:static.
2020-03-12gnu: python2-jupyter-console: Build with python2.Efraim Flashner
* gnu/packages/python-xyz.scm (python2-jupyter-console)[arguments]: Add python keyword, set to python-2.
2020-03-12gnu: python-jupyter-console: Specify python2 variant.Efraim Flashner
* gnu/packages/python-xyz.scm (python-jupyter-console)[properties]: New field. Specify python2-jupyter-console as python2 variant.
2020-03-12services: mumi-service-type: Update to latest version of mumi.Ricardo Wurmus
* gnu/services/web.scm (%mumi-activation): Create /var/mumi/db. (mumi-shepherd-services): Add service for mumi worker.
2020-03-12gnu: mumi: Update to 0.0.0-7.6653e2d.Ricardo Wurmus
* gnu/packages/mail.scm (mumi): Update to 0.0.0-7.6653e2d. [inputs]: Add guile-sqlite3.
2020-03-12gnu: r-cairo: Update to 1.5-11.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cairo): Update to 1.5-11.
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