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2022-02-19gnu: expat: Update replacement to 2.4.5 [security fixes]....This fixes CVE-2022-25235, CVE-2022-25236, CVE-2022-25313, CVE-2022-25314, and CVE-2022-25315. * gnu/packages/xml.scm (expat/fixed): Update to 2.4.5. Marius Bakke
2022-02-19gnu: python-scikit-image: Update to 0.19.1....* gnu/packages/python-science.scm (python-scikit-image): Update to 0.19.1. [propagated-inputs]: Add PYTHON-PYTHRAN. [native-inputs]: Remove PYTHON-CODECOV, PYTHON-FLAKE8, PYTHON-PYTEST-COV, and PYTHON-WHEEL. Marius Bakke
2022-02-19gnu: Add python-pythran....* gnu/packages/python-science.scm (python-pythran): New variable. Marius Bakke
2022-02-19gnu: Add python-beniget....* gnu/packages/python-xyz.scm (python-beniget): New variable. Marius Bakke
2022-02-19gnu: xsimd: Update to 8.0.5....* gnu/packages/cpp.scm (xsimd): Update to 8.0.5. Marius Bakke
2022-02-19gnu: xtensor: Update to 0.24.0....* gnu/packages/algebra.scm (xtensor): Update to 0.24.0. [native-inputs]: Add DOCTEST. (xtensor-benchmark)[arguments]: Narrow substitution regex. Marius Bakke
2022-02-19gnu: xtl: Update to 0.7.4....* gnu/packages/cpp.scm (xtl): Update to 0.7.4. [native-inputs]: Add DOCTEST. [arguments]: Remove trailing #t. Marius Bakke
2022-02-19gnu: python-gridmap: Disable sanity check....* gnu/packages/python-xyz.scm (python-gridmap)[arguments]: Add #:phases. Marius Bakke
2022-02-19gnu: python-pyvo: Update to 1.2.1....* gnu/packages/astronomy.scm (python-pyvo): Update to 1.2.1. [arguments]: Remove obsolete workaround. Marius Bakke
2022-02-19gnu: efivar: Update to 38....* gnu/packages/linux.scm (efivar): Update to 38. [source](snippet, modules, patches): Remove. [native-inputs]: Add MANDOC. (efibootmgr)[source](modules, snippet): New fields. * gnu/packages/patches/efivar-gcc-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-02-19services: dbus: Increase auth_timeout value to 5 minutes....This is a follow-up to 488f1c589df; the problem had re-appeared on my machine. * gnu/services/dbus.scm (dbus-configuration-directory): Increase 'auth_timeout' value from 60000 to 300000 ms (5 minutes). Maxim Cournoyer
2022-02-19gnu: Remove python-dukpy, python2-dukpy....* gnu/packages/python-xyz.scm: Remove unused packages python-dukpy, python2-dukpy. This is actually not the 'dukpy' package in pypi either but something else made for calibre. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-19gnu: calibre: Improve package style....* gnu/packages/ebook.scm (calibre)[snippet]: Remove trailing #T. [native-inputs]: Add BASH-MINIMAL. Re-order entries alphabetically. [arguments]<#:phases>: Use G-expressions. Remove trailing #T. Use SEARCH-INPUT-FILE (or SEARCH-NATIVE-INPUT-FILE) instead of WHICH. Use THIS-PACKAGE-INPUT instead of ASSOC-REF. Nicolas Goaziou
2022-02-19gnu: calibre: Remove input labels....* gnu/packages/ebook.scm (calibre)[inputs]: Remove labels. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-19gnu: calibre: Update to 5.36.0....* gnu/packages/ebook.scm (calibre): Update to 5.36.0. Remove no longer needed zeroconf patch. [inputs]: Remove python-dbus, python-dukpy, python-pycryptodome. Add python-jeepney, libstemmer. * gnu/packages/patches/calibre-fix-zeroconf.patch: Delete patch. * gnu/local.mk: Remove reference to patch. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-19gnu: python-css-parser: Update to 1.0.7....* gnu/packages/python-web.scm (python-css-parser): Update to 1.0.7. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-19gnu: python-apsw: Enable extension loading....* gnu/packages/databases.scm (python-apsw): Enable extension loading. It is required by calibre. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-19gnu: python-html5-parser: Update to 0.4.10....* gnu/packages/python-web.scm (python-html5-parser): Update to 0.4.10. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-19gnu: python-regex: Update to 2022.1.18....* gnu/packages/python-xyz.scm (python-regex): Update to 2022.1.18. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2022-02-18gnu: emacs-org-pomodoro: Fix build....* gnu/packages/emacs-xyz.scm (emacs-org-pomodoro)[arguments]<#:test-command>: Add missing GEXP. Nicolas Goaziou
2022-02-18gnu: emacs-graphviz-dot-mode: Fix build....* gnu/packages/emacs-xyz.scm (emacs-graphviz-dot-mode)[argument]: Use G-expressions. Nicolas Goaziou
2022-02-18gnu: emacs-lispy: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-lispy)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-realgud: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-realgud)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-chess: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-chess)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-org-pomodoro: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-org-pomodoro)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-mit-scheme-doc: Remove trailing #T....* gnu/packages/emacs-xyz.scm (emacs-mit-scheme-doc)[snippet]: Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-sudo-edit: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-sudo-edit)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-flycheck-ledger: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-flycheck-ledger)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-roguel-ike: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-roguel-ike)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18relative-bufferNicolas Goaziou
2022-02-18gnu: emacs-undo-fu-session: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-undo-fu-session)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-kbd: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-kbd)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-graphviz-dot-mode: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-graphviz-dot-mode)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-go-mode: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-go-mode)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-relative-buffers: Remove trailing #T....* gnu/packages/emacs-xyz.scm (emacs-relative-buffers)[snippet]: Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-flycheck: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-flycheck)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-unpackaged-el: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-unpackaged-el)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-graphql: Remove trailing #T....* gnu/packages/emacs-xyz.scm (emacs-graphql)[snippet]: Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-geiser-racket: Improve package style....* gnu/packages/emacs-xyz.scm (emacs-geiser-racket)[arguments]: Use G-expressions. Remove trailing #T. Nicolas Goaziou
2022-02-18gnu: emacs-julia-snail: Use G-expressions....* gnu/packages/emacs-xyz.scm (emacs-julia-snail)[arguments]<#:include>: Use G-expressions. Nicolas Goaziou
2022-02-18gnu: emacs-julia-snail: Update to 1.1.5....* gnu/packages/emacs-xyz.scm (emacs-julia-snail): Update to 1.1.5. Nicolas Goaziou
2022-02-18gnu: freecad: Use same version of tbb as dependencies....Fixes <https://issues.guix.gnu.org/54011>. * gnu/packages/engineering.scm (freecad)[inputs]: Replace tbb by tbb-2020. Guillaume Le Vaillant
2022-02-18gnu: lsh: Build with optimizations....This is a followup to 1cdd6b09c8bc45c1ae5a16f16d5bcf33ab0ceb5e, which inadvertently turned off optimizations. * gnu/packages/ssh.scm (lsh)[arguments]: Add "-O2 -g" next to "-fcommon". Ludovic Courtès
2022-02-18gnu: upower: Remove obsolete phase...Now umockdev-wrapper refers to things by absolute path, this phase is no longer necessary. * gnu/packages/gnome.scm (upower)[arguments]<#:phases>{pre-check}: Remove. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2022-02-18gnu: umockdev: Reference libumockdev by absolute path....* gnu/packages/check.scm (umockdev)[arguments]<#:phases>{absolute-introspection-library}: New phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2022-02-18gnu: umockdev: Reference 'env' and 'sh' by absolute path....* gnu/packages/check.scm (umockdev)[inputs]: Add 'bash-minimal' and 'coreutils-minimal'. (umockdev)[arguments]<#:phases>{absolute-filenames}: New phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2022-02-18gnu: umockdev: Use G-expressions....While we're at it, remove the trailing #t. * gnu/packagers/check.scm (umockdev)[arguments]<#:phases>: Change to a G-exp. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2022-02-18gnu: upower: Update to 0.99.15....Upstream has removed the Autotools build system and now only supports Meson, so the build system has been changed to 'meson-build-system'. The patch 'power-builddir.patch' has to be replaced to adjust to the switch to Meson. This has been done by adding an origin snippet. The origin snippet has been simplified, and for consistency, it has been made a gexp. Some dependencies were Autotools-only and could be removed. * gnu/packages/gnome.scm (upower): Update to 0.99.15. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2022-02-18gnu: upower: Make it auto-updatable....* gnu/packages/gnome.scm (upower)[properties]: Set 'release-tag-prefix' and 'release-tag-delimiter'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxime Devos
2022-02-18services: qemu-guest-agent: Fix implementation....Previously, by accessing the raw <qemu-guest-agent-configuration> fields, 'qemu' would match the first field, which is the '%location' field, not the 'qemu' field. It would seem this bug has always been present since the addition of the 'location' field in d132d9f96ba34bca58b18e293e03b393054fd962 predates the addition of 'qemu-guest-agent-service-type' in f634a0baab85454a6feac25e29905f564b276c9e. Fixes <https://issues.guix.gnu.org/54041>. Reported by Ricardo Wurmus <rekado@elephly.net>. * gnu/services/virtualization.scm (qemu-guest-agent-shepherd-service): Use accessors for <qemu-guest-agent-configuration>. Ludovic Courtès