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2021-01-21gnu: guile2.2-shepherd: Add missing input.Efraim Flashner
* gnu/packages/admin.scm (guile2.2-shepherd)[inputs]: Add guile2.2-readline.
2021-01-21gnu: shepherd: Remove guild warnings.Efraim Flashner
* gnu/packages/admin.scm (shepherd)[arguments]: Pass GUILE_AUTO_COMPILE=0 as make-flag to prevent guild warnings.
2021-01-21swh: Test proper handling of null visit snapshot URL.Ludovic Courtès
* tests/swh.scm (%origin): Change "visits_url" to "origin_visits_url". (%visits): New variable. ("origin-visit, no snapshots"): New test.
2021-01-21gnu: guile-json: Update to 4.5.1.Ludovic Courtès
Fixes <https://bugs.gnu.org/45615>. Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>. * gnu/packages/guile.scm (guile-json-4): Update to 4.5.1.
2021-01-21gnu: guix: Update to d4a562b.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to d4a562b.
2021-01-21gnu: dnsmasq: Update to 2.83 [security fixes].Pierre Langlois
Includes fixes for CVE-2020-25681, CVE-2020-25682, CVE-2020-25683, CVE-2020-25684, CVE-2020-25685, CVE-2020-25686, CVE-2020-25687. * gnu/packages/dns.scm (dnsmasq): Update to 2.83.
2021-01-21gnu: bind: Update to 9.16.11.Tobias Geerinckx-Rice
* gnu/packages/dns.scm (bind): Update to 9.16.11.
2021-01-21gnu: Add emacs-jsonnet-mode.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-jsonnet-mode): New variable.
2021-01-20gnu: Mutt: Fix CVE-2021-3181.Leo Famulari
* gnu/packages/patches/mutt-CVE-2021-3181.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (mutt)[source]: Use it.
2021-01-21Revert "substitute: Remove extra 'newline' call."Ludovic Courtès
This reverts commit d5a1b0e86f248edd53c785b910b5d51ee708b0fc. This change turned out to be misguided; it would lead to "substitute:" lines being printed on the client side, without anything beyond the colon sign.
2021-01-21repl: Fix exception handling for interpreted code.Ludovic Courtès
The 'stack' variable could be #f when code is interpreted, which in practice happens when running in "legacy" mode--i.e., when 'open-inferior' invokes "guile" instead of "guix repl". * guix/repl.scm (send-repl-response)[handle-exception]: Check whether STACK is true before passing it to 'stack->frames'. * tests/inferior.scm ("&inferior-exception, legacy mode"): New test.
2021-01-21inferior: Add 'inferior-eval-with-store' tests.Ludovic Courtès
* tests/inferior.scm ("inferior-eval-with-store, exception") ("inferior-eval-with-store, not a procedure"): New tests.
2021-01-21import, swh: Adjust to Guile-JSON 4.5.x unspecified value handling.Ludovic Courtès
* guix/import/cpan.scm (<cpan-release>)[home-page]: Add 'unspecified?' case. * guix/import/gem.scm (<gem>)[licenses]: Likewise. (json->gem-dependency-list): Likewise. * guix/swh.scm (<directory-entry>)[checksums]: Likewise.
2021-01-20gnu: libnode: Fix regression in unused phases.zimoun
Fixes regression introduced with commit 1d77141f6d5004cf10d1f9ead53855f25a973847. Reported by Pierre-Antoine Bouttier <pierre-antoine.bouttier@univ-grenoble-alpes.fr>. * gnu/packages/node.scm (libnode)[arguments]: Delete phase "patch-node-shebang". Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-01-20gnu: lisp-repl-core-dumper: Patch path to `cat'.Pierre Neidhardt
* gnu/packages/lisp.scm (lisp-repl-core-dumper)[arguments]: Substitute calls to `cat' with full store path.
2021-01-20gnu: Add solarus-quest-editor.Nicolas Goaziou
* gnu/packages/games.scm (solarus-quest-editor): New variable. (solarus): Add a comment about linked updates.
2021-01-20archive: Note service type in ACL hint.Tobias Geerinckx-Rice
* guix/scripts/archive.scm (authorize-key): Mention guix-service-type.
2021-01-20gnu: solarus: Remove ".git" suffix from URL.Nicolas Goaziou
* gnu/packages/games.scm (solarus)[source]: Remove ".git" suffix from URL.
2021-01-20gnu: Add solarus.Nicolas Goaziou
* gnu/packages/games.scm (solarus): New variable.
2021-01-20gnu: r-fdrtool: Update to 1.2.16.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fdrtool): Update to 1.2.16.
2021-01-20gnu: r-pbkrtest: Update to 0.5-0.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.5-0.1. [propagated-inputs]: Add r-broom, r-dplyr, and r-numderiv. [native-inputs]: Add r-knitr.
2021-01-20gnu: r-quantreg: Update to 5.82.Ricardo Wurmus
* gnu/packages/statistics.scm (r-quantreg): Update to 5.82.
2021-01-20gnu: r-rcppeigen: Update to 0.3.3.9.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.9.1.
2021-01-20gnu: r-vgam: Update to 1.1-5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-5.
2021-01-20gnu: r-robustbase: Update to 0.93-7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-7.
2021-01-20gnu: r-cowplot: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.1.
2021-01-20gnu: r-sfsmisc: Update to 1.1-8.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-8.
2021-01-20gnu: r-plotly: Update to 4.9.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-plotly): Update to 4.9.3. [propagated-inputs]: Remove r-hexbin; add r-vctrs.
2021-01-20gnu: r-hexbin: Update to 1.28.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.2.
2021-01-20gnu: r-glmnet: Update to 4.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1.
2021-01-20gnu: r-dt: Update to 0.17.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dt): Update to 0.17.
2021-01-20gnu: r-segmented: Update to 1.3-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 1.3-1.
2021-01-20gnu: r-rsqlite: Update to 2.2.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.2.
2021-01-20gnu: r-rmarkdown: Update to 2.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.6.
2021-01-20gnu: r-catools: Update to 1.18.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-catools): Update to 1.18.1.
2021-01-20gnu: r-rcpparmadillo: Update to 0.10.1.2.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.1.2.2.
2021-01-20gnu: r-hms: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-hms): Update to 1.0.0. [propagated-inputs]: Add r-ellipsis and r-lifecycle.
2021-01-20gnu: r-withr: Update to 2.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-withr): Update to 2.4.0.
2021-01-20gnu: r-git2r: Update to 0.28.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-git2r): Update to 0.28.0.
2021-01-20gnu: r-backports: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-backports): Update to 1.2.1.
2021-01-20gnu: r-data-table: Update to 1.13.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-data-table): Update to 1.13.6.
2021-01-20gnu: r-dplyr: Update to 1.0.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.3.
2021-01-20gnu: r-tibble: Update to 3.0.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.5.
2021-01-20gnu: r-rlang: Update to 0.4.10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.10.
2021-01-20gnu: r-testthat: Update to 3.0.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-testthat): Update to 3.0.1.
2021-01-20gnu: r-bh: Update to 1.75.0-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-bh): Update to 1.75.0-0.
2021-01-20gnu: r-dbi: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbi): Update to 1.1.1. [native-inputs]: Add r-knitr.
2021-01-20gnu: r-gdtools: Update to 0.2.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdtools): Update to 0.2.3.
2021-01-20gnu: r-ggplot2: Update to 3.3.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.3.
2021-01-20gnu: r-nlme: Update to 3.1-151.Ricardo Wurmus
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-151.
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