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2023-04-29gnu: r-processx: Update to 3.8.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-processx): Update to 3.8.1.
2023-04-29gnu: r-xts: Update to 0.13.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-xts): Update to 0.13.1.
2023-04-29gnu: r-recipes: Update to 1.0.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 1.0.6.
2023-04-29gnu: r-fitdistrplus: Update to 1.1-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.1-11.
2023-04-29gnu: r-ctrdata: Update to 1.13.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ctrdata): Update to 1.13.0.
2023-04-29gnu: r-ps: Update to 1.7.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-ps): Update to 1.7.5.
2023-04-29gnu: r-fontawesome: Update to 0.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-fontawesome): Update to 0.5.1.
2023-04-29gnu: r-climatol: Update to 4.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-climatol): Update to 4.0.0. [propagated-inputs]: Remove r-mapdata and r-maps.
2023-04-29gnu: r-carrier: Update to 0.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-carrier): Update to 0.1.1. [propagated-inputs]: Remove r-pryr; add r-lobstr.
2023-04-29gnu: r-cplm: Update to 0.7-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-cplm): Update to 0.7-11.
2023-04-29gnu: r-castor: Update to 1.7.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-castor): Update to 1.7.9.
2023-04-29gnu: r-tictoc: Update to 1.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-tictoc): Update to 1.2.
2023-04-29gnu: r-radiant-data: Update to 1.5.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-radiant-data): Update to 1.5.6. [source]: Delete minified JavaScript. [arguments]: Add build phase 'process-javascript. [native-inputs]: Add sources for html2canvas.js.
2023-04-29gnu: r-rliger: Strip jar timestamps.Ricardo Wurmus
* gnu/packages/cran.scm (r-rliger)[arguments]: Add phase 'strip-jar-timestamps; remove trailing #T; add ant-build-system modules. [source]: Simplify snippet. [native-inputs]: Add zip.
2023-04-29gnu: r-hpar: Avoid internet access.Ricardo Wurmus
ExperimentHub::createHubAccessors needs internet access. When R tests if the package can be loaded it runs zzz.R, which contains the call to createHubAccessors. We set the variable GUIX_BUILD to conditionally disable this call. * gnu/packages/bioconductor.scm (r-hpar)[arguments]: Add two build phases: 'set-HOME and 'avoid-internet-access.
2023-04-29gnu: r-coin: Delete file with bad encoding.Ricardo Wurmus
* gnu/packages/cran.scm (r-coin)[arguments]: Add phase 'remove-test-file-with-latin-encoding.
2023-04-29gnu: r-cplm: Fix build with R 4.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-cplm)[arguments]: Update headers to find definition for GET_SLOT.
2023-04-29gnu: r-phyloseq: Update to 1.44.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.44.0.
2023-04-29gnu: r-tximeta: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.0.
2023-04-29gnu: r-tricycle: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.8.0.
2023-04-29gnu: r-biscuiteer: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.14.0.
2023-04-29gnu: r-omnipathr: Update to 3.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.8.0.
2023-04-29gnu: r-omicade4: Update to 1.40.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.40.0.
2023-04-29gnu: r-dmrseq: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.20.0.
2023-04-29gnu: r-dada2: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.28.0.
2023-04-29gnu: r-bsseq: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.36.0.
2023-04-29gnu: r-biotmle: Update to 1.24.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.24.0.
2023-04-29gnu: r-biotip: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.14.0.
2023-04-29gnu: r-bioqc: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.28.0.
2023-04-29gnu: r-bionet: Update to 1.60.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.60.0.
2023-04-29gnu: r-bionero: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.8.0.
2023-04-29gnu: r-biomvcclass: Update to 1.68.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.68.0.
2023-04-29gnu: r-mvcclass: Update to 1.74.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.74.0.
2023-04-29gnu: r-biomformat: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.28.0.
2023-04-29gnu: r-biodb: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.8.0.
2023-04-29gnu: r-biocdockermanager: Update to 1.11.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.11.0.
2023-04-29gnu: r-biocthis: Update to 1.10.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.10.0.
2023-04-29gnu: r-basilisk: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.12.0.
2023-04-29gnu: r-basilisk-utils: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.12.0.
2023-04-29gnu: r-dir-expiry: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.8.0.
2023-04-29gnu: r-genetclassifier: Update to 1.40.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.40.0.
2023-04-29gnu: r-minet: Update to 3.58.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-minet): Update to 3.58.0.
2023-04-29gnu: r-biobtreer: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.12.0.
2023-04-29gnu: r-bgeedb: Update to 2.26.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.26.0.
2023-04-29gnu: r-bgeecall: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.16.0.
2023-04-29gnu: r-beclear: Update to 2.16.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.16.0.
2023-04-29gnu: r-megadepth: Update to 1.9.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.9.0.
2023-04-29gnu: r-ballgown: Update to 2.32.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.32.0.
2023-04-29gnu: r-guitar: Update to 2.16.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.16.0.
2023-04-29gnu: r-chromstar: Update to 1.26.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.26.0.
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