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2021-05-26gnu: Add rust-seq-macro-0.2.Zheng junjie
* gnu/packages/crates-io.scm (rust-seq-macro-0.2): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-askama-0.10.Zheng junjie
* gnu/packages/crates-io.scm (rust-askama-0.10): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-askama-derive-0.10.Zheng junjie
* gnu/packages/crates-io.scm (rust-askama-derive-0.10): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-askama-shared-0.11.Zheng junjie
* gnu/packages/crates-io.scm (rust-askama-shared-0.11): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-askama-escape-0.10.Zheng junjie
* gnu/packages/crates-io.scm (rust-askama-escape-0.10): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-clap-3.Zheng Junjie
* gnu/packages/crates-io.scm (rust-clap-3): New variable. (rust-clap-2): Inherit from above. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-clap-derive-3.Zheng Junjie
* gnu/packages/crates-io.scm (rust-clap-derive-3): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-strsim-0.10.Zheng Junjie
* gnu/packages/crates-io.scm (rust-strsim-0.10): New variable. (rust-strsim-0.9): Inherit from above. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-os-str-bytes-2.Zheng Junjie
* gnu/packages/crates-io.scm (rust-os-str-bytes-2): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-textwrap-0.12.Zheng Junjie
* gnu/packages/crates-io.scm (rust-textwrap-0.12): New variable. (rust-textwrap-0.11): Inherit from above. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-hyphenation-0.8.Zheng Junjie
* gnu/packages/crates-io.scm (rust-hyphenation-0.8): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-hyphenation-commons-0.8.Zheng Junjie
* gnu/packages/crates-io.scm (rust-hyphenation-commons-0.8): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add rust-ordered-float-2.Zheng Junjie
* gnu/packages/crates-io.scm (rust-ordered-float-2): New variable. (rust-ordered-float-1): Inherit from above. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: emacs-shell-command+: Use Git repo instead of ELPA URL.Xinglu Chen
* emacs-xyz.scm (emacs-shell-command+)[source]: Use Git repository instead of the unstable ELPA URL. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: Add emacs-org-inline-pdf.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-org-inline-pdf): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: emacs-transient: Update to 0.3.4.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.4. [arguments]<#:phases>: Don’t return #t, this will be redundant once core-updates gets merged. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: emacs-magit: Update to 3.0.0.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.0.0. [arguments]<#:phases>: Don’t return #t, this will be redundant once the core-updates branch has been merged. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: emacs-forge: Update to 0.2.0.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-forge): Update to 0.2.0. [arguments]<#:phases>: Don’t return #t at the end of phases, this will be redundant once core-updates gets merged. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26gnu: minimap2: Install more files.Efraim Flashner
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Add modules. Adjust custom 'install phase to also install library, headers and a pkg-config file.
2021-05-26gnu: minimap2: Update to 2.18.Efraim Flashner
* gnu/packages/bioinformatics.scm (minimap2): Update to 2.18. [source]: Remove patch. * gnu/packages/patches/minimap2-aarch64-support.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-05-26gnu: Add r-bayesfactor.Lars-Dominik Braun
* gnu/packages/statistics.scm (r-bayesfactor): New variable.
2021-05-26gnu: Add r-effects.Lars-Dominik Braun
* gnu/packages/statistics.scm (r-effects): New variable.
2021-05-26gnu: Add r-logspline.Lars-Dominik Braun
* gnu/packages/statistics.scm (r-logspline): New variable.
2021-05-26gnu: Add r-kknn.Lars-Dominik Braun
* gnu/packages/statistics.scm (r-kknn): New variable.
2021-05-26gnu: Add r-hypergeo.Lars-Dominik Braun
* gnu/packages/cran.scm (r-hypergeo): New variable.
2021-05-26gnu: Add r-elliptic.Lars-Dominik Braun
* gnu/packages/cran.scm (r-elliptic): New variable.
2021-05-26gnu: Add r-contfrac.Lars-Dominik Braun
* gnu/packages/cran.scm (r-contfrac): New variable.
2021-05-26gnu: Add r-decipher.Roel Janssen
* gnu/packages/bioconductor.scm (r-decipher): New variable.
2021-05-26gnu: Add r-deepsnv.Roel Janssen
* gnu/packages/bioconductor.scm (r-deepsnv): New variable.
2021-05-26gnu: Add r-geneoverlap.Roel Janssen
* gnu/packages/bioconductor.scm (r-geneoverlap): New variable.
2021-05-26gnu: cuirass: Update to 1.0.0-20.524b81d.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-20.524b81d.
2021-05-26gnu: Add minimodem.Guillaume Le Vaillant
* gnu/packages/radio.scm (minimodem): New variable.
2021-05-26gnu: Add r-chipseeker.Roel Janssen
* gnu/packages/bioconductor.scm (r-chipseeker): New variable.
2021-05-26gnu: Add r-model4you.Roel Janssen
* gnu/packages/cran.scm (r-model4you): New variable.
2021-05-26gnu: Add r-pvclust.Roel Janssen
* gnu/packages/cran.scm (r-pvclust): New variable.
2021-05-26gnu: Add r-bsgenome-btaurus-ucsc-bostau8.Roel Janssen
* gnu/packages/bioconductor.scm (r-bsgenome-btaurus-ucsc-bostau8): New variable.
2021-05-26gnu: Add r-phantompeakqualtools.Roel Janssen
* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): New variable.
2021-05-26gnu: Add r-spp.Roel Janssen
* gnu/packages/bioinformatics.scm (r-spp): New variable.
2021-05-26gnu: Add r-aneufinder.Roel Janssen
* gnu/packages/bioconductor.scm (r-aneufinder): New variable.
2021-05-26gnu: Add r-aneufinderdata.Roel Janssen
* gnu/packages/bioconductor.scm (r-aneufinderdata): New variable.
2021-05-25gnu: Add rsync 3.2.3.Leo Famulari
* gnu/packages/rsync.scm (rsync-next): New variable.
2021-05-25gnu: nginx: Update to 1.21.0 [fixes CVE-2021-23017].Leo Famulari
* gnu/packages/web.scm (nginx, nginx-documentation): Update to 1.21.0.
2021-05-25gnu: qhull: Build position independent.Efraim Flashner
* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to build code position independent.
2021-05-25gnu: cuirass: Update to 1.0.0-19.e1382f0.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-19.e1382f0.
2021-05-25gnu: qhull: Link binaries to shared library.Efraim Flashner
This drops the package size by nearly 60%. * gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to link binaries to shared library.
2021-05-25gnu: Add perl-set-intervaltree.Roel Janssen
* gnu/packages/perl.scm (perl-set-intervaltree): New variable.
2021-05-25gnu: Add perl-log-message-simpleRoel Janssen
* gnu/packages/perl.scm (perl-log-message-simple): New variable.
2021-05-25gnu: Add perl-log-message.Roel Janssen
* gnu/packages/perl.scm (perl-log-message): New variable.
2021-05-25gnu: Add perl-extutils-manifest.Roel Janssen
* gnu/packages/perl.scm (perl-extutils-manifest): New variable.
2021-05-25gnu: Add perl-data-uuid.Roel Janssen
* gnu/packages/perl.scm (perl-data-uuid): New variable.
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