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2022-04-04gnu: freebayes: Fix test suite....* gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Add python. Efraim Flashner
2022-04-04gnu: smithwaterman: Use new style for phases....* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Use list of G-Expressions. Efraim Flashner
2022-04-04gnu: smithwaterman: Fix cross-compiling....* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Add make-flag to use cxx-for-target. Adjust custom 'patch-source and 'build-dynamic phases to use cross toolchain binaries when cross compiling. Remove trailing #t from phases. Efraim Flashner
2022-04-04gnu: marble-qt: Update to 21.12.3....* gnu/packages/kde.scm (marble-qt): Update to 21.12.3. [inputs]: Add qtwebchannel, qtwebengine. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Michael Rohleder
2022-04-04gnu: Add r-zoeppritz....* gnu/packages/cran.scm (r-zoeppritz): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-04gnu: Add python-bip39....* gnu/packages/python-xyz.scm (python-bip39): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Attila Lendvai
2022-04-04gnu: parallel: Update to 20220322....* gnu/packages/parallel.scm (parallel): Update to 20220322. Efraim Flashner
2022-04-04gnu: stgit: Update to 1.5....* gnu/packages/version-control.scm (stgit): Update to 1.5. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Greg Hogan
2022-04-04gnu: git: Update to 2.35.1....* gnu/packages/version-control.scm (git): Update to 2.35.1. [phases]: Delete trailing #t. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Maxim Cournoyer
2022-04-04gnu: emacs-elpy: Update to 1746e70....* gnu/packages/emacs-xyz.scm (emacs-elpy): Update to 1746e70. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> jgart
2022-04-04gnu: emacs-poet-theme: Update to 16eb694....* gnu/packages/emacs-xyz.scm (emacs-poet-theme): Update to 16eb694. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> jgart
2022-04-04gnu: emacs-gnugo: Patch 'gnugo-program' variable....* gnu/packages/emacs-xyz.scm (emacs-gnugo) [phases]{configure-default-gnugo-xpms-variable}: Rename to... {configure}: ... this. Patch the 'gnugo-program' variable. [inputs]: Add gnugo. [description]: Describe basic usage entry points. Maxim Cournoyer
2022-04-04build: emacs-utils: Add a (as-display) subform to `emacs-substitute-variables'....* guix/build/emacs-utils.scm (as-display): New variable. (replacement-helper): New syntax helper. (emacs-substitute-sexps): Use it and update doc. (emacs-substitute-variables): Add an optional 'modifier' datum to the replacement specification, and document it. Maxim Cournoyer
2022-04-04import: pypi: Use new style for the conditional unzip input....* guix/import/pypi.scm (make-pypi-sexp)<unzip>: Use new style. Maxim Cournoyer
2022-04-03gnu: svt-av1: Update to 0.9.1....* gnu/packages/video.scm (svt-av1): Update to 0.9.1. Leo Famulari
2022-04-03gnu: libaom: Update to 3.3.0....* gnu/packages/video.scm (libaom): Update to 3.3.0. Leo Famulari
2022-04-03gnu: linux-libre 4.14: Update to 4.14.275....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.275. (linux-libre-4.14-pristine-source): Update hash. Leo Famulari
2022-04-03gnu: xterm: Make big cursors work....* gnu/packages/patches/xterm-370-explicit-xcursor.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xterm)[source]: Add it. [arguments]<#:configure-flags>: Add "-lXcursor". Danny Milosavljevic
2022-04-03gnu: cpufrequtils: Set file-name for source....* gnu/packages/linux.scm (cpufrequtils)[source]: Add file-name field. Efraim Flashner
2022-04-03gnu: rust-combine-4: Update to 4.6.3....* gnu/packages/crates-io.scm (rust-combine-4): Update to 4.6.3. [arguments]<cargo-inputs>: Add rust-futures-core-0.3, rust-tokio-util-0.6. Remove rust-futures-util-0.3. Efraim Flashner
2022-04-03gnu: rust-shlex-1: Update to 1.1.0....* gnu/packages/crates-io.scm (rust-shlex-1): Update to 1.1.0. Efraim Flashner
2022-04-03gnu: rust-hyphenation-0.8: Update to 0.8.4....* gnu/packages/crates-io.scm (rust-hyphenation-0.8): Update to 0.8.4. [arguments]: Don't skip build. <cargo-inputs>: Remove duplicate entries. <cargo-development-inputs>: New field. Add rust-criterion-0.3, rust-once-cell-1, rust-quickcheck-1, rust-unicode-segmentation-1. (rust-hyphenation-commons-0.8): Update to 0.8.4. [arguments]: Don't skip build. Efraim Flashner
2022-04-03gnu: rust-fsv-0.4: Update to 0.4.7....* gnu/packages/crates-io.scm (rust-fsv-0.4): Update to 0.4.7. [arguments]: Don't skip build. <cargo-development-inputs>: New field. Add rust-doc-comment-0.3, rust-fnv-1, rust-memmap-0.7, rust-quickcheck-0.9, rust-rand-0.7. Efraim Flashner
2022-04-03gnu: rust-criterion-0.3: Update to 0.3.5....* gnu/packages/crates-io.scm (rust-criterion-0.3): Update to 0.3.5. [arguments]<cargo-inputs>: Replace rust-approx-0.4 with 0.5, rust-quickcheck-0.9 with 1. Efraim Flashner
2022-04-03gnu: rust-criterion-plot-0.4: Update to 0.4.4....* gnu/packages/crates-io.scm (rust-criterion-plot-0.4): Update to 0.4.4. [arguments]<cargo-inputs>: Replace rust-itertools-0.9 with 0.10. Efraim Flashner
2022-04-03gnu: Add rust-os-str-bytes-6....* gnu/packages/crates-io.scm (rust-os-str-bytes-6): New variable. (rust-os-str-bytes-4): Inherit from rust-os-str-bytes-6. Efraim Flashner
2022-04-03gnu: Add rust-print-bytes-0.5....* gnu/packages/crates-io.scm (rust-print-bytes-0.5): New variable. (rust-print-bytes-0.4): Inherit from rust-print-bytes-0.5. Efraim Flashner
2022-04-03gnu: Add rust-os-str-bytes-4....* gnu/packages/crates-io.scm (rust-os-str-bytes-4): New variable. (rust-os-str-bytes-2): Inherit from rust-os-str-bytes-4. Efraim Flashner
2022-04-03gnu: Add rust-print-bytes-0.4....* gnu/packages/crates-io.scm (rust-print-bytes-0.4): New variable. Efraim Flashner
2022-04-03gnu: Add rust-smawk-0.3....* gnu/packages/crates-io.scm (rust-smawk-0.3): New variable. Efraim Flashner
2022-04-03gnu: Add rust-ndarray-0.14....* gnu/packages/crates-io.scm (rust-ndarray-0.14): New variable. * gnu/packages/patches/rust-ndarray-0.14-remove-blas-src.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2022-04-03gnu: rust-escargot-0.5: Update to 0.5.7....* gnu/packages/crates-io.scm (rust-escargot-0.5): Update to 0.5.7. [arguments]<cargo-inputs>: Remove rust-lazy-static-1. Add rust-once-cell-1. <cargo-development-inputs>: Replace rust-assert-fs-0.11 with 1. Efraim Flashner
2022-04-03gnu: rust-terminal-size-0.1: Update to 0.1.17....* gnu/packages/crates-io.scm (rust-terminal-size-0.1): Update to 0.1.17. [arguments]: Skip tests. Efraim Flashner
2022-04-03gnu: Add rust-lipsum-0.8....* gnu/packages/crates-io.scm (rust-lipsum-0.8): New variable. Efraim Flashner
2022-04-03gnu: Add rust-unicode-linebreak-0.1....* gnu/packages/crates-io.scm (rust-unicode-linebreak-0.1): New variable. Efraim Flashner
2022-04-03gnu: Add rust-uniquote-3....* gnu/packages/crates-io.scm (rust-uniquote-3): New variable. Efraim Flashner
2022-04-03gnu: Add rust-version-sync-0.9....* gnu/packages/crates-io.scm (rust-version-sync-0.9): New variable. (rust-version-sync-0.8): Inherit from rust-version-sync-0.9. Efraim Flashner
2022-04-03gnu: rust-os-pipe-0.9: Don't skip build....* gnu/packages/crates-io.scm (rust-os-pipe-0.9)[arguments]: Inherit from rust-os-pipe-1. Efraim Flashner
2022-04-03gnu: Add rust-os-pipe-1....* gnu/packages/crates-io.scm (rust-os-pipe-1): New variable. (rust-os-pipe-0.9): Inherit from rust-os-pipe-1. Efraim Flashner
2022-04-03gnu: Add rust-kstring-1....* gnu/packages/crates-io.scm (rust-kstring-1): New variable. Efraim Flashner
2022-04-03gnu: Add rust-document-features-0.2....* gnu/packages/crates-io.scm (rust-document-features-0.2): New variable. Efraim Flashner
2022-04-03gnu: radicale: Update to 3.1.5....* gnu/packages/dav.scm (radicale): Update to 3.1.5. [source]: tags have a leading "v" now. [arguments]: disable tests temporarily. Tested-by: Jonathan Brielmaier <jonathan.brielmaier@web.de> Jonathan Brielmaier
2022-04-03gnu: oil: Update to 0.9.9....* gnu/packages/shells.scm (oil): Update to 0.9.9. [source]: Add comment on embedded CPython like Ludo’ proposed in https://issues.guix.gnu.org/53642#3. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2022-04-03home: services: zsh: Fix zshenv creation....Fixes a regression introduced by 4935501fd9f690d8990bb798237d51702b87fb3f that would skip generating the user's ~/.config/zsh/.zshenv unless both of zshenv and environment-variables are set in the configuration. * gnu/home/services/shells.scm (zsh-get-configuration-files): Generate ~/.config/zsh/.zshenv when only one of zshenv or environment-variables is specified. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Brian Kubisiak
2022-04-03gnu: mate-polkit: Improve synopsis....* gnu/packages/mate.scm (mate-polkit): Improve synopsis. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Brendan Tildesley
2022-04-03gnu: xfce: Add notification support...* gnu/packages/xfce.scm (xfce)[inputs]: Add XFCE4-NOTIFYD. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Brendan Tildesley
2022-04-03gnu: xfce: Remove input labels....(xfconf, libxfce4ui, xfce4-panel, xfce4-whiskermenu-plugin, xfce, xfce4-screensaver): Remove input labels. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Brendan Tildesley
2022-04-03gnu: xfce4-screenshooter: Update to 1.9.10....* gnu/packages/xfce.scm (xfce4-screenshooter): Update to 1.9.10. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Brendan Tildesley
2022-04-03gnu: xfce4-whiskermenu-plugin: Update to 2.6.2....* gnu/packages/xfce.scm (xfce4-whiskermenu-plugin): Update to 2.6.2. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Brendan Tildesley
2022-04-02gnu: cpufrequtils: Update to 008-1.a2f0c39....Fixes build failure on non-x86 architectures, and brings cpufrequtils to the state of the art from 2011. * gnu/packages/linux.scm (cpufrequtils)[version]: Use git-version. [source]: Use git-fetch. Vagrant Cascadian