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2024-02-29gnu: libgit2-1.5: Update to 1.5.2.Efraim Flashner
* gnu/packages/version-control.scm (libgit2-1.5): Update to 1.5.2. Change-Id: I6243b17dac63b68ffc7c69953ac0f20d56ed90c3
2024-02-28gnu: python-click: Update to 8.1.7.Arun Isaac
* gnu/packages/python-xyz.scm (python-click): Update to 8.1.7. Change-Id: I9315c06c72459d5b04ef843b710c37fd79278a9a
2024-02-28gnu: python-jmespath: Update to 1.0.1.Arun Isaac
* gnu/packages/python-xyz.scm (python-jmespath): Update to 1.0.1. [native-inputs]: Remove python-nose. Add python-pytest. Change-Id: If5df9541f34fb656f461a10da8df02a3dd101741
2024-02-28gnu: bind: Update to 9.19.21 [security fixes].John Kehayias
The current release fixes CVE-2023-50387 and other security issues. Previous releases fix many other security issues. * gnu/packages/dns.scm (bind): Update to 9.19.21. [source]: Remove 'patches' field. * gnu/packages/patches/bind-re-add-attr-constructor-priority.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it. Reported-by: Felix Lechner <felix.lechner@lease-up.com> Change-Id: I2415de88f16d9c952a1adcee5219980a3a19bb59
2024-02-28gnu: knot-resolver: Update to 5.7.1 [security fixes].John Kehayias
Fixes CVE-2023-50868 and CVE-2023-50387 as well as other security issues. * gnu/packages/dns.scm (knot-resolver): Update to 5.7.1. Change-Id: I8d3b084d6ff356593651ff4864edc7cffadcf442 Reported-by: Felix Lechner <felix.lechner@lease-up.com> Change-Id: I2b2304aaf96582bca81d3f20a5d5a60c3daff68d
2024-02-28gnu: knot: Update to 3.3.4.John Kehayias
* gnu/packages/dns.scm (knot): Update to 3.3.4. Change-Id: I5ea3bdd8060da8c32c404473197e02bcb3018d7b
2024-02-28gnu: unbound: Update to 1.19.1 [security fixes].John Kehayias
Fixes CVE-2023-50387 and CVE-2023-50868 * gnu/packages/dns.scm (unbound): Update to 1.19.1. Change-Id: I25f87ce60c87d1ed9dfbb41983039440fb396191 Reported-by: Felix Lechner <felix.lechner@lease-up.com> Change-Id: If6bb9b782d775dfacbc6d4c6dedc3e6cfeb2b6b3
2024-02-28gnu: dnsmasq: Update to 2.90 [security fixes].John Kehayias
Fixes CVE 2023-50387 and CVE 2023-50868. * gnu/packages/dns.scm (dnsmasq): Update to 2.90. Change-Id: Id814dd2a562fe3c90673b98f7e0d6f3571988a90 Reported-by: Felix Lechner <felix.lechner@lease-up.com> Change-Id: I191a62d62f202c65d7063eed0368affc115d82ca
2024-02-28gnu: Add emacs-activities.Ricardo Wurmus
* gnu/packages/emacs-xyz.scm (emacs-activities): New variable. Change-Id: Ie1a0c88492f7aff47e2b0af8b8ef5e03143b7d21
2024-02-28system: default-bash-profile: Add Guix Home search paths as well.Florian Pelz
Ordinary .guix-profile is searched already. Also this makes desktop environments find packages installed in Guix Home. * gnu/system/shadow.scm (%default-bash-profile): Add Home search paths.
2024-02-28gnu: kitsas: Update to 5.4.1Saku Laesvuori
* gnu/packages/finance.scm (kitsas): Update to 5.4.1. [inputs, arguments]: Adapt to building with Qt6. Disable building of tests. Change-Id: I968579d762ebecef9f9e8b602682587a054c41ad Signed-off-by: Andreas Enge <andreas@enge.fr>
2024-02-28gnu: qbittorrent: Update to 4.6.3.Oleg Pykhalov
* gnu/packages/bittorrent.scm (qbittorrent)[version]: Update to 4.6.3. [inputs]: Use libtorrent-rasterbar 2.0.9.
2024-02-28gnu: emacs-project-x: Update to 0.1.6-0.eafc982.Ricardo Wurmus
* gnu/packages/emacs-xyz.scm (emacs-project-x): Update to 0.1.6-0.eafc982. Change-Id: I692a3813fbbedcd5c2c36f8d9685efdbf57fe530
2024-02-28gnu: Add emacs-project-tab-groups.Ricardo Wurmus
* gnu/packages/emacs-xyz.scm (emacs-project-tab-groups): New variable. Change-Id: If190fa02490ce952512ea3abf3dc4b3f990778a5
2024-02-28Merge branch 'rust-team'Efraim Flashner
Change-Id: Iee31c5de29c357c822f60df4fa8ce758779eb349
2024-02-28gnu: bowtie1: Enable cross-compiling.Efraim Flashner
* gnu/packages/bioinformatics.scm (bowtie1)[arguments]: Adjust make-flags to enable cross-compiling. Change-Id: I6f5696e5ad6a1ea5b3f79e8dbbd162f0fe8d4905
2024-02-28gnu: bowtie1: Enable building on more systems.Efraim Flashner
* gnu/packages/bioinformatics.scm (bowtie1)[arguments]: Add make-flag to disable searching for cpu features on non-x86 systems. [supported-systems]: Enable all 64-bit supported systems. Change-Id: Ice30df945ba154e39cd58a91847329e81038a3af
2024-02-28gnu: bowtie1: Update to 1.3.1.Efraim Flashner
* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.1. [arguments]: Add test-target. [inputs]: Use newer tbb. Change-Id: I7af6aa248e5db9f91ce84fba9ba741621b110479
2024-02-28gnu: gnucash: Update to 5.5.Efraim Flashner
* gnu/packages/gnucash.scm (gnucash): Update to 5.5. (gnucash-docs): Update to 5.5. Change-Id: I3c188c952afde07fce80648a5f99c84648ec6a3a
2024-02-28gnu: gst-plugins-bad: Skip camerabin test on aarch64-linux.Efraim Flashner
* gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Adjust custom 'adjust-tests phase to skip the camerabin test on aarch64-linux. Change-Id: Ic69a19252bee5e63ff94bc0d3159360937ee81c4
2024-02-27gnu: python-cdflib: Update to 1.2.4.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-cdflib): Update to 1.2.4. Change-Id: If6b654bf4bfc0e195055e03fddd22bb376e15920
2024-02-27gnu: python-stcal: Update to 1.6.0.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-stcal): Update to 1.6.0. Change-Id: I94667375f4d2d14be6b3d2bdb9beaefbea3a554d
2024-02-27gnu: python-drizzle: Update to 1.15.0.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-drizzle): Update to 1.15.0. [native-inputs]: Remove python-flake8. Change-Id: Id872c5ac904a6856fd5d9061b34f36cbfdf1645e
2024-02-27gnu: Add python-ginga.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-ginga, ginga-qt5): New variables. Change-Id: I51358b4b64241c78f4bbc7fa16fdd2721ddc0d28
2024-02-27gnu: Add python-radiospectra.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-radiospectra): New variable. Change-Id: I98f488671a16ce8e937a76f00b58e70119b7760a
2024-02-27gnu: Add python-sunpy-soar.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-sunpy-soar): New variable. Change-Id: I6e7dd8cb7380df396720fda13f549858d2be440d
2024-02-27gnu: Add python-extinction.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-extinction): New variable. Change-Id: I0f8877f8c79f6dd03150d92269c238cd706cc0ba
2024-02-27gnu: python-poliastro: Relax requirements.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-poliastro) [arguments] <#:phases>: Add 'relax-requirements phase. Change-Id: Idb75f1ee9e0b9646024fab0a1d17ea50ca63a7f5
2024-02-27gnu: python-astroml: Ignore some failing tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-astroml) [arguments] <#:test-flags>: Disable some tests which are not compatible with Astropy 6.0.0. Change-Id: I92f207e1e20a80de8904ee04aaba11469d9249b0
2024-02-27gnu: python-sunpy: Speed up tests and relax requirements.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-sunpy): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. <#:phases>: Add 'relax-requirements. Change-Id: I67c3308b8c5e9b878377f2175f74f1c469a43610
2024-02-27gnu: python-spectral-cube: Speed up tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-spectral-cube): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [propagated-inputs]: Remove python-aplpy. [native-inputs]: Add python-pytest-xdist. Change-Id: Icd5afb95ea64406a2f61e4d395bfe503c668cf12
2024-02-27gnu: python-roman-datamodels: Speed up tests.Sharlatan Hellseher
gnu/packages/astronomy.scm (python-roman-datamodels): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: I02b9e04a2f37fe05dc372c902b22d03da8f79605
2024-02-27gnu: python-regions: Speed up tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-regions): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: Ib0c50fa7c357c70ea78d803428a39f6d6ec3c2e7
2024-02-27gnu: python-poppy: Speed up tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-poppy): Speed up tests. [arguments] <#:test-flags>: Add with "-n" option. [native-inputs]: Add python-pytest-xdist and python-scikit-image. Change-Id: Ic72b1c7c700204cc91e00dcc5a0706859420109b
2024-02-27gnu: python-photutils: Speed up testsSharlatan Hellseher
* gnu/packages/astronomy.scm (python-photutils): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: I3eff6c4ac4f6c3d8367179e1e8cdf55bbf1c03cc
2024-02-27gnu: python-asdf-coordinates-schemas: Speed up tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-asdf-coordinates-schemas): Speed up tests. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. [propagated-inputs]: Swap python-asdf to python-asdf-3.0. Change-Id: I0cf8aa077dbfa28e3473e5c49ab420426038884f
2024-02-27gnu: python-asdf-astropy: Speed up tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-asdf-astropy): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. Change-Id: Icb2efbe6d9fa6f5154fa81189a3d0127f7d26568
2024-02-27gnu: python-asdf: Speed up tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-asdf): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: I5a369e8f3ca43b9ba88c1053d0c55d218e6adc43
2024-02-27gnu: python-aplpy: Disable tests.Sharlatan Hellseher
There is upstream issue https://github.com/aplpy/aplpy/issues/492 to make package compatible wit astropy v6.0. Keep package and make it buildable for now. * gnu/package/astronomy.scm (python-aplpy) [arguments] <#:tests?> Disable it. <#:phases?> Delete 'sanity-check to keep package buildable. Change-Id: If022887a5359ab9287286770d52933319a023ff0
2024-02-27gnu: libpasastro: Remove system constrains.Sharlatan Hellseher
* gnu/packages/astronomy.scm (libpasastro) [supported-systems]: Remove it. [arguments] <#:make-flags>: Add attempt to build on RISCV. Change-Id: I6dbc843ec25fca46b7c9501e21cc8fba1e9d7bcb
2024-02-27gnu: python-stdatamodels: Update to 1.9.1.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-stdatamodels): Update to 1.9.1. Change-Id: Ib07e70b62ae904765b2c38a1a78a0c5575d36de1
2024-02-27gnu: python-skyfield: Update to 1.48.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-skyfield): Update to 1.48. Change-Id: I4f94ec7c8cbea3af325fff81d570ef044f710f71
2024-02-27gnu: python-rad: Enable tests.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-rad) [arguments] <#:test-flags>: Enable most of the tests, ignore the one introducing cycle. [native-inputs]: Add python-pytest. Change-Id: Ice4bc5eb2dcaae92c44466ea1eb932544a502927
2024-02-27gnu: python-rad: Update to 0.19.0.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-rad): Update to 0.19.0. Change-Id: Iddfd637a764545b48f7a39506a2ef97d12501223
2024-02-27gnu: python-roman-datamodels: Update to 0.19.0.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-roman-datamodels): Update to 0.19.0. Change-Id: Ib9d2164956715b47228f5659f9b930e93fdbdc01
2024-02-27gnu: python-pysynphot: Improve package style.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-pysynphot): Fix indention of the package. Change-Id: I0cb6d29a0c5184ff4701e227ec98513c8813af2b
2024-02-27gnu: python-pysynphot: Update to 2.0.0-0.54e9e2a.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-pysynphot): Update to 2.0.0-0.54e9e2a. [source]: Swap to git checkout as release is dated. [arguments] <#:phases>: Add 'set-version phase. Change-Id: Ibb51304cf15f191c731727344d413e2c2fd1a5ee
2024-02-27gnu: python-jwst: Update to 1.13.4.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-jwst): Update to 1.13.4. Change-Id: Ib076eb063b316be391efbb47b4e9c8b080e78e27
2024-02-27gnu: python-h5netcdf: Update to 1.3.0.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-h5netcdf): Update to 1.3.0. Change-Id: I6652b0d7d185b4475fb574b236534bba38a2cf07
2024-02-27gnu: python-crds: Update to 11.17.16.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-crds): Update to 11.17.16. Change-Id: Ib6f193f94c727c1280eadc15dfcc4c227e6c2a3e
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