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2018-06-05gnu: r-heatmaply: Add r-knitr.Ricardo Wurmus
* gnu/packages/cran.scm (r-heatmaply)[propagated-inputs]: Add r-knitr.
2018-06-05gnu: r-rtracklayer: Update to 1.40.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.40.3.
2018-06-05gnu: r-ranger: Update to 0.10.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ranger): Update to 0.10.1.
2018-06-05gnu: r-np: Update to 0.60-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-np): Update to 0.60-8.
2018-06-05gnu: t-series: Update to 0.10-45.Ricardo Wurmus
* gnu/packages/cran.scm (t-series): Update to 0.10-45.
2018-06-05gnu: r-ksamples: Update to 1.2-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-8.
2018-06-05gnu: r-methylkit: Update to 1.6.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.1.
2018-06-05gnu: r-bamsignals: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.12.1.
2018-06-05build-system/r: Update to Bioconductor 3.7.Ricardo Wurmus
This is a follow-up to 41f17554d88795bf35fbfc3e05301a6d2f64cca0. * guix/build-system/r.scm (bioconductor-uri): Update to version 3.7.
2018-06-05gnu: p11-kit: Update to 0.23.12.Tobias Geerinckx-Rice
* gnu/packages/tls.scm (p11-kit): Update to 0.23.12.
2018-06-05gnu: beets: Return #t from phases.Tobias Geerinckx-Rice
* gnu/packages/music.scm (beets)[arguments]: Substitute INVOKE for SYSTEM* and return #t from all phases.
2018-06-05gnu: nano: Update to 2.9.8.Tobias Geerinckx-Rice
* gnu/packages/nano.scm (nano): Update to 2.9.8.
2018-06-05gnu: python-pycurl: Update to 7.43.0.2.Tobias Geerinckx-Rice
* gnu/packages/python-web.scm (python-pycurl): Update to 7.43.0.2.
2018-06-05gnu: fvwm: Update to 2.6.8.Tobias Geerinckx-Rice
* gnu/packages/fvwm.scm (fvwm): Update to 2.6.8.
2018-06-05gnu: perl-parse-yapp: Update to 1.21.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-parse-yapp): Update to 1.21.
2018-06-05gnu: perl-text-balanced: Update to 2.03.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-text-balanced): Update to 2.03. [source]: Update URI.
2018-06-05gnu: perl-posix-strftime-compiler: Update to 0.42.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-posix-strftime-compiler): Update to 0.42.
2018-06-05gnu: perl-moosex-methodattributes: Update to 0.31.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-moosex-methodattributes): Update to 0.31.
2018-06-05gnu: perl-module-install: Update to 1.19.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-module-install): Update to 1.19. [source]: Update URI.
2018-06-05gnu: perl-memoize-expirelru: Update to 0.56.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-memoize-expirelru): Update to 0.56. [source]: Update URI.
2018-06-04gnu: ccid, pcsc-lite: Move away from alioth.debian.org.Tobias Geerinckx-Rice
* gnu/packages/security-token.scm (ccid, pcsc-lite)[source, home-page]: Update upstream URI.
2018-06-04gnu: ranger: Enable image support.Rutger Helling
* gnu/packages/disk.scm (ranger)[inputs]: Add 'w3m'. [arguments]: Add wrapper for W3MIMGDISPLAY_PATH environment variable.
2018-06-04gnu: lz4: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (lz4)[home-page]: Use HTTPS.
2018-06-04gnu: thermald: Update to 1.7.2.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (thermald): Update to 1.7.2. [arguments]: Remove Upstart kluge as promised.
2018-06-04gnu: pdfgrep: Update to 2.1.1.Tobias Geerinckx-Rice
* gnu/packages/pdf.scm (pdfgrep): Update to 2.1.1.
2018-06-04gnu: lxqt-build-tools: Update to 0.5.0.Tobias Geerinckx-Rice
* gnu/packages/lxqt.scm (lxqt-build-tools): Update to 0.5.0.
2018-06-04gnu: perl-libintl-perl: Update to 1.29.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-libintl-perl): Update to 1.29.
2018-06-04gnu: perl-hash-multivalue: Update to 0.16.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-hash-multivalue): Update to 0.16. [source]: Update URI.
2018-06-04gnu: perl-file-pushd: Update to 1.016.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-file-pushd): Update to 1.016.
2018-06-04gnu: perl-exception-class: Update to 1.44.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-exception-class): Update to 1.44.
2018-06-04gnu: perl-datetime-timezone: Update to 2.19.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-datetime-timezone): Update to 2.19.
2018-06-04gnu: perl-test-without-module: Update to 0.20.Tobias Geerinckx-Rice
* gnu/packages/perl-check.scm (perl-test-without-module): Update to 0.20.
2018-06-04gnu: perl-datetime: Update to 1.49.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-datetime): Update to 1.49.
2018-06-04gnu: perl-context-preserve: Update to 0.03.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-context-preserve): Update to 0.03.
2018-06-04gnu: perl-class-load-xs: Update to 0.10.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-class-load-xs): Update to 0.10. [native-inputs]: Replace perl-test-requires with perl-test-needs. Add perl-test-without-module.
2018-06-04gnu: perl-class-load: Update to 0.24.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-class-load): Update to 0.24. [native-inputs]: Replace perl-test-requires with perl-test-needs. Add perl-test-without-module.
2018-06-04gnu: sent: Say ‘plain text’.Tobias Geerinckx-Rice
‘Plaintext’ is a crypto term. ‘Slideshow’ is apparently acceptable. * gnu/packages/suckless.scm (sent)[synopsis, description]: Add spaces.
2018-06-04gnu: snd: Version documentation directory.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (snd)[arguments]: Install documentation to the conventional location. Remove redundant MKDIR-P. Align cosmetically.
2018-06-04gnu: acpica: Update to 20180531.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (acpica): Update to 20180531.
2018-06-04gnu: isync: Add SASL support.Tobias Geerinckx-Rice
This adds ~5.5 MiB (7.5%) to isync's now-78.6 MiB closure. * gnu/packages/mail.scm (isync)[inputs]: Add CYRUS-SASL.
2018-06-04gnu: python-pyqt: Update to 5.10.1.Efraim Flashner
* gnu/packages/qt.scm (python-pyqt): Update to 5.10.1. [inputs]: Remove qtwebkit. [arguments]: Add custom phase to fix compilation with Qt 5.11.
2018-06-04gnu: python-sip: Update to 4.19.8.Efraim Flashner
* gnu/packages/qt.scm (python-sip): Update to 4.19.8.
2018-06-03gnu: gcompris-qt: Update to 0.91.Efraim Flashner
* gnu/packages/education.scm (gcompris-qt): Update to 0.91. [arguments]: Add custom phase to fix building with Qt 5.11.
2018-06-03gnu: quassel: Fix building with Qt 5.11.Efraim Flashner
* gnu/packages/irc.scm (quassel)[sources]: Add patch. Return #t from snippet. * gnu/packages/patches/quassel-qt-5.11.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2018-06-03gnu: w3m: Enable image support.Rutger Helling
* gnu/packages/w3m.scm (w3m)[inputs]: Add gdk-pixbuf, libx11.
2018-06-03gnu: keepassxc: Fix compilation with Qt 5.11.Efraim Flashner
* gnu/packages/password-utils.scm (keepassxc)[arguments]: Add custom 'patch-sources phase to include missing headers.
2018-06-03gnu: rust: Fix build for armhf and mips64el.Mark H Weaver
This is a followup to commit 514026d7de36b299238aff9dfcc2f898fb04072a. * gnu/packages/rust.scm (nix-system->gnu-triplet-for-rust): New variable. (rust-bootstrap, mrustc, rust-1.23): Use 'nix-system->gnu-triplet-for-rust' instead of 'nix-system->gnu-triplet'.
2018-06-02gnu: xxd: Remove all inherited inputs.Efraim Flashner
* gnu/packages/vim.scm (xxd)[inputs]: New field, don't inherit from vim.
2018-06-02gnu: vim: Update to 8.1.0026.Efraim Flashner
* gnu/packages/vim.scm (vim): Update to 8.1.0026. [arguments]: Update substitute list on custom 'patch-config-files phase. [inputs]: Remove inetutils.
2018-06-02gnu: xxd: Return true from all phases.Efraim Flashner
* gnu/packages/vim.scm (xxd)[arguments]: Return '#t' from custom 'chdir phase.
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