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2023-10-05gnu: r-rootsolve: Update to 1.8.2.4....* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.4. Ricardo Wurmus
2023-10-05gnu: r-doby: Update to 4.6.19....* gnu/packages/cran.scm (r-doby): Update to 4.6.19. Ricardo Wurmus
2023-10-05gnu: r-getopt: Update to 1.20.4....* gnu/packages/cran.scm (r-getopt): Update to 1.20.4. Ricardo Wurmus
2023-10-05gnu: r-nodbi: Update to 0.9.8....* gnu/packages/cran.scm (r-nodbi): Update to 0.9.8. Ricardo Wurmus
2023-10-05gnu: r-insight: Update to 0.19.5....* gnu/packages/cran.scm (r-insight): Update to 0.19.5. Ricardo Wurmus
2023-10-05gnu: r-pupillometryr: Update to 0.0.5....* gnu/packages/cran.scm (r-pupillometryr): Update to 0.0.5. [propagated-inputs]: Remove r-data-table and r-lazyeval; add r-stringr. Ricardo Wurmus
2023-10-05gnu: r-billboarder: Update to 0.4.1....* gnu/packages/cran.scm (r-billboarder): Update to 0.4.1. Ricardo Wurmus
2023-10-05gnu: r-learnr: Update to 0.11.5....* gnu/packages/cran.scm (r-learnr): Update to 0.11.5. [native-inputs]: Add esbuild. Ricardo Wurmus
2023-10-05gnu: r-renv: Update to 1.0.3....* gnu/packages/cran.scm (r-renv): Update to 1.0.3. Ricardo Wurmus
2023-10-05gnu: r-rio: Update to 1.0.1....* gnu/packages/cran.scm (r-rio): Update to 1.0.1. [propagated-inputs]: Remove r-openxlsx; add r-lifecycle, r-r-utils, r-stringi, and r-writexl. Ricardo Wurmus
2023-10-05gnu: r-import: Update to 1.3.1....* gnu/packages/cran.scm (r-import): Update to 1.3.1. Ricardo Wurmus
2023-10-05gnu: r-tinytex: Update to 0.47....* gnu/packages/cran.scm (r-tinytex): Update to 0.47. Ricardo Wurmus
2023-10-05gnu: r-psych: Update to 2.3.9....* gnu/packages/cran.scm (r-psych): Update to 2.3.9. Ricardo Wurmus
2023-10-05gnu: r-rmysql: Update to 0.10.26....* gnu/packages/cran.scm (r-rmysql): Update to 0.10.26. Ricardo Wurmus
2023-10-05gnu: r-limsolve: Update to 1.5.7....* gnu/packages/cran.scm (r-limsolve): Update to 1.5.7. Ricardo Wurmus
2023-10-05gnu: r-lamw: Update to 2.2.1....* gnu/packages/cran.scm (r-lamw): Update to 2.2.1. Ricardo Wurmus
2023-10-05gnu: r-sp: Update to 2.1-0....* gnu/packages/cran.scm (r-sp): Update to 2.1-0. Ricardo Wurmus
2023-10-05gnu: r-prettyunits: Update to 1.2.0....* gnu/packages/cran.scm (r-prettyunits): Update to 1.2.0. Ricardo Wurmus
2023-10-05gnu: r-ctrdata: Update to 1.15.2....* gnu/packages/cran.scm (r-ctrdata): Update to 1.15.2. Ricardo Wurmus
2023-10-05gnu: r-pkgload: Update to 1.3.3....* gnu/packages/cran.scm (r-pkgload): Update to 1.3.3. [propagated-inputs]: Add r-pkgbuild. Ricardo Wurmus
2023-10-05gnu: r-gensa: Update to 1.1.10.1....* gnu/packages/cran.scm (r-gensa): Update to 1.1.10.1. Ricardo Wurmus
2023-10-05gnu: r-d3r: Update to 1.1.0....* gnu/packages/cran.scm (r-d3r): Update to 1.1.0. [propagated-inputs]: Remove r-rlang. Ricardo Wurmus
2023-10-05gnu: r-jqr: Update to 1.3.0....* gnu/packages/cran.scm (r-jqr): Update to 1.3.0. Ricardo Wurmus
2023-10-05gnu: r-curl: Update to 5.1.0....* gnu/packages/cran.scm (r-curl): Update to 5.1.0. Ricardo Wurmus
2023-10-05gnu: r-jade: Update to 2.0-4....* gnu/packages/cran.scm (r-jade): Update to 2.0-4. Ricardo Wurmus
2023-10-05gnu: r-gunifrac: Update to 1.8....* gnu/packages/cran.scm (r-gunifrac): Update to 1.8. [propagated-inputs]: Add r-inline. Ricardo Wurmus
2023-10-05gnu: r-ggstatsplot: Update to 0.12.1....* gnu/packages/cran.scm (r-ggstatsplot): Update to 0.12.1. Ricardo Wurmus
2023-10-05gnu: r-datawizard: Update to 0.9.0....* gnu/packages/cran.scm (r-datawizard): Update to 0.9.0. Ricardo Wurmus
2023-10-05gnu: r-activepathways: Update to 2.0.2....* gnu/packages/bioconductor.scm (r-activepathways): Update to 2.0.2. Ricardo Wurmus
2023-10-05gnu: r-valr: Update to 0.7.0....* gnu/packages/bioconductor.scm (r-valr): Update to 0.7.0. [propagated-inputs]: Add r-lifecycle. Ricardo Wurmus
2023-10-05gnu: r-biomartr: Update to 1.0.5....* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.5. Ricardo Wurmus
2023-10-05refresh: Fix sorting of updates by file and line number....* guix/scripts/refresh.scm (guix-refresh): Add cascade-sort procedure and use it to sort specs by package location. Ricardo Wurmus
2023-10-05doc: contributing: Add alternative setups section....Start with Guile Studio and Vim/NeoVim. * doc/contributing.texi (Alternative Setups): Add section explaining other setups that are similar to the one in The Perfect Setup. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Ekaitz Zarraga
2023-10-05gnu: emacs-telega: Update to 0.8.03-1.17bfa50....* gnu/packages/emacs-xyz.scm (emacs-telega-server): Update to 0.8.03-1.17bfa50. Andrew Tropin
2023-10-05gnu: tdlib: Update to 1.8.16-0.4d1d22d....* gnu/packages/messaging.scm (tdlib): Update to 1.8.16-0.4d1d22d. Andrew Tropin
2023-10-05gnu: r-aplot: Update to 0.2.1....* gnu/packages/cran.scm (r-aplot): Update to 0.2.1. Ricardo Wurmus
2023-10-05gnu: r-tximeta: Update to 1.18.3....* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.3. Ricardo Wurmus
2023-10-05gnu: r-biodb: Update to 1.8.1....* gnu/packages/bioconductor.scm (r-biodb): Update to 1.8.1. [propagated-inputs]: Add r-git2r. Ricardo Wurmus
2023-10-05gnu: r-gviz: Update to 1.44.2....* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.2. Ricardo Wurmus
2023-10-05gnu: r-s4vectors: Update to 0.38.2....* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.2. Ricardo Wurmus
2023-10-05gnu: r-biocstyle: Update to 2.28.1....* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.28.1. Ricardo Wurmus
2023-10-05gnu: r-yapsa: Update to 1.26.8....* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.26.8. Ricardo Wurmus
2023-10-05gnu: r-enrichplot: Update to 1.20.3....* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.20.3. [propagated-inputs]: Add r-ggfun. Ricardo Wurmus
2023-10-05gnu: r-spectra: Update to 1.10.3....* gnu/packages/bioconductor.scm (r-spectra): Update to 1.10.3. Ricardo Wurmus
2023-10-05gnu: r-keggrest: Update to 1.40.1....* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.40.1. Ricardo Wurmus
2023-10-05gnu: r-genomeinfodb: Update to 1.36.4....* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.4. Ricardo Wurmus
2023-10-05gnu: r-ensembldb: Update to 2.24.1....* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.24.1. Ricardo Wurmus
2023-10-05gnu: r-ancombc: Update to 2.2.2....* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.2. Ricardo Wurmus
2023-10-05gnu: r-omnipathr: Update to 3.8.2....* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.8.2. Ricardo Wurmus
2023-10-05gnu: curl: Update to 8.3.0....According to upstream, the current version has 19 security issues. See also <https://curl.se/docs/vuln-7.85.0.html>. * gnu/packages/curl.scm (curl/fixed): New variable. (curl): Use it as replacement. Liliana Marie Prikler
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