Age | Commit message (Collapse) | Author |
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* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.36.0.
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* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.62.0.
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* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.60.0.
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* gnu/packages/bioconductor.scm (r-marray): Update to 1.78.0.
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* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.34.0.
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* gnu/packages/bioconductor.scm (r-pepsnmr): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-graph): Update to 1.78.0.
[native-inputs]: Add r-knitr.
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* gnu/packages/bioconductor.scm (r-multtest): Update to 2.56.0.
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* gnu/packages/bioconductor.scm (r-mbkmeans): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.10.0.
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* gnu/packages/bioconductor.scm (r-greylistchip): Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.22.0.
[native-inputs]: Add r-rmarkdown.
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* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.32.0.
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* gnu/packages/bioconductor.scm (r-quantsmooth): Update to 1.66.0.
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* gnu/packages/bioconductor.scm (r-oligo): Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.78.0.
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* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-zlibbioc): Update to 1.46.0.
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* gnu/packages/bioconductor.scm (r-xvector): Update to 0.40.0.
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* gnu/packages/bioconductor.scm (r-xmapbridge): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-xina): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-vsn): Update to 3.68.0.
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* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.46.0.
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* gnu/packages/bioconductor.scm (r-tximport): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-topgo): Update to 2.52.0.
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* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.6.0.
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* gnu/packages/bioconductor.scm (r-sva): Update to 3.48.0.
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* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.12.0.
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* gnu/packages/bioconductor.scm (r-stager): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-slingshot): Update to 2.8.0.
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* gnu/packages/bioconductor.scm (r-scds): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-trajectoryutils): Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-transcriptr): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-simplifyenrichment): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-shortread): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-shinymethyl): Update to 1.36.0.
[propagated-inputs]: Remove r-illuminahumanmethylation450kmanifest and r-matrixstats; add
r-biobase, r-htmltools, and r-matrixgenerics.
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* gnu/packages/bioconductor.scm (r-seqpattern): Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-seqlogo): Update to 1.66.0.
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* gnu/packages/bioconductor.scm (r-scry): Update to 1.12.0.
[propagated-inputs]: Remove r-hdf5array.
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* gnu/packages/bioconductor.scm (r-scmap): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-scdblfinder): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-scannotatr): Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.60.0.
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* gnu/packages/bioconductor.scm (r-rsamtools): Update to 2.16.0.
[native-inputs]: Add r-knitr.
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* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.12.0.
[arguments]: Add phase 'use-system-libraries.
[inputs]: Add bzip2, c-blosc, and zstd:lib.
[native-inputs]: Add r-biocstyle and r-rmarkdown.
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