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2022-07-02gnu: gdm: Use regular check.Thiago Jung Bauermann
* gnu/packages/gnome.scm (gdm)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: iodine: Use regular check.Thiago Jung Bauermann
* gnu/packages/networking.scm (iodine)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: libsbml: Use regular check.Thiago Jung Bauermann
* gnu/packages/bioinformatics.scm (libsbml)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: edi: Use regular check.Thiago Jung Bauermann
* gnu/packages/enlightenment.scm (edi)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: burp: Use regular check.Thiago Jung Bauermann
* gnu/packages/backup.scm (burp)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: libsigrokdecode: Use regular check.Thiago Jung Bauermann
* gnu/packages/electronics.scm (libsigrokdecode)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: recutils: Use regular check.Thiago Jung Bauermann
* gnu/packages/databases.scm (recutils)[native-inputs]: Replace check-0.14 with check. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-07-02gnu: curl: Skip failing test on x86-32.Liliana Marie Prikler
* gnu/packages/curl.scm (curl-7.84.0)[arguments]<#:phases>: When running on x86-32, add a phase to skip test 3026 “curl_global_init thread-safety”.
2022-07-02gnu: ibus-anthy: Modernize arguments.Liliana Marie Prikler
* gnu/packages/ibus.scm (ibus-anthy)[arguments]: Convert to list of G-Expressions.
2022-07-02gnu: ibus-anthy: Archaize wrapper.Liliana Marie Prikler
This is a follow-up to 39b118776bbbaed049f8bcafa27bde30d9d0b2f6, which applied the wrong modernization metaphors. For more information, see <https://issues.guix.gnu.org/52576#16>. * gnu/packages/ibus.scm (ibus-anthy)[#:phases]<wrap-programs>: Refer to outputs by assoc-ref.
2022-07-01tests: Adjust 'guix graph' test to latest OCaml changes.Ludovic Courtès
* tests/graph.scm ("reverse bag DAG"): Adjust to latest OCaml changes by looking at dune/ocaml-camomile/ocaml-utop.
2022-07-01profiles: Do not repeat entries in 'manifest' file.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/55499>. Reported by Ricardo Wurmus <rekado@elephly.net>. With this change, the manifest file created for: guix install r r-seurat r-cistopic r-monocle3 r-cicero-monocle3 r-assertthat goes from 5.7M to 176K. Likewise, on this profile, wall-clock time of: GUIX_PROFILING=gc guix package -I goes from 0.7s to 0.1s, with heap usage going from 55M to 9M. * guix/profiles.scm (manifest->gexp)[optional]: New procedure. [entry->gexp]: Turn into a monadic procedure. Return a 'repeated' sexp if ENTRY was already visited before. Adjust caller accordingly. Bump manifest version. (sexp->manifest)[sexp->manifest-entry]: Turn into a monadic procedure. Add case for 'repeated' nodes. Add each entry to the current state vhash. Add clause for version 4 manifests. [sexp->manifest-entry/v3]: New procedure, with former 'sexp->manifest-entry' code. * tests/profiles.scm ("deduplication of repeated entries"): New test. * guix/build/profiles.scm (manifest-sexp->inputs+search-paths)[let-fields]: New macro. Use it. Expect version 4. Add clause for 'repeated' nodes.
2022-07-01tests: Augment profile collision test.Ludovic Courtès
* tests/profiles.scm ("collision of propagated inputs"): Check the parents of ENTRY1 and ENTRY2.
2022-07-01services: openssh: Listen on IPv6 only when IPv6 is supported.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/56327>. Reported by André Batista <nandre@riseup.net>. * gnu/services/ssh.scm (openssh-shepherd-service)[ipv6-support?]: New variable. Use it in 'start' method.
2022-07-01upstream: 'guix refresh -u' no longer stops when upstream info is lacking.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/56338>. Starting from 53b9c27aa59bebf955f0aa24fef60a101480ef5c, 'guix refresh -u' would stop upon the first failure to determine upstream releases. This fixes that. * guix/upstream.scm (package-update): Warn rather than update.
2022-07-01gnu: Add luppp.Sughosha
* gnu/packages/music.scm (luppp): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add fabla.Sughosha
* gnu/packages/music.scm (fabla): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: sorcer: Update to 1.1.3-1.cc7f6f5.Sughosha
* gnu/packages/music.scm (sorcer): Update to 1.1.3-1.cc7f6f5. [source]: Fetch with git; remove generated C++ file. [native-inputs]: Replace faust with faust-0.9.67. This update fixes the building of the package. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add faust-0.9.67.Ricardo Wurmus
* gnu/packages/audio.scm (faust-0.9.67): New variable.
2022-07-01gnu: linux-libre 5.4: Update to 5.4.202.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.202. (linux-libre-5.4-pristine-source): Update hash.
2022-07-01gnu: linux-libre 5.10: Update to 5.10.127.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.127. (linux-libre-5.10-pristine-source): Update hash.
2022-07-01gnu: linux-libre 5.15: Update to 5.15.51.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.51. (linux-libre-5.15-pristine-source): Update hash.
2022-07-01gnu: linux-libre: Update to 5.18.8.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.18-version): Update to 5.18.8. (linux-libre-5.18-pristine-source): Update hash.
2022-07-01gnu: dezyne: Update to 2.15.3.Jan (janneke) Nieuwenhuizen
* gnu/packages/dezyne.scm (dezyne)[source]: Update to 2.15.3.
2022-07-01gnu: mcrl2: Update to 202206.0.Jan (janneke) Nieuwenhuizen
* gnu/packages/patches/mcrl2-fix-1687.patch, gnu/packages/patches/mcrl2-fix-counterexample.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/maths.scm (mcrl2): Update to 202206.0 and use them.
2022-07-01gnu: Add python-ikarus.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-ikarus): New variable.
2022-07-01tests: Add sanitizer test.Ludovic Courtès
* tests/records.scm ("define-record-type* & sanitize without default value"): New test.
2022-07-01image: Add sanitizers for 'format' and 'partition-table-type'.Ludovic Courtès
This allows common mistakes to be diagnosed early. * gnu/image.scm (define-set-sanitizer): New macro. (validate-image-format, validate-partition-table-type): New sanitizers. (<image>)[format, partition-table-type]: Add 'sanitize' property.
2022-07-01image: Raise an error when an image lacks a bootable partition.Ludovic Courtès
* gnu/system/image.scm (find-root-partition): Raise an error when 'find' returns #f.
2022-07-01image: Avoid use of the deprecated 'gpt' option of genimage.Ludovic Courtès
* gnu/system/image.scm (system-disk-image)[genimage-type-options]: Use 'partition-table-type' instead of the deprecated 'gpt' option.
2022-07-01image: Add default value for partition initializer.Ludovic Courtès
Previously, the default value would lead to a wrong-type-to-apply crash. * gnu/system/image.scm (system-disk-image)[image-builder]: When 'partition-initializer' returns #f, fall back to INITIALIZE-ROOT-PARTITION. * gnu/tests/base.scm (run-root-unmount-test)[test-image]: Remove 'initializer' field of partition. * gnu/image.scm (<partition>)[initializer]: Add comment.
2022-07-01image: 'system-image' throws when given an incorrect image format.Ludovic Courtès
Previously 'system-image' would return *unspecified* in that case, leading to a wrong-type-arg error crash down the road. * gnu/system/image.scm (system-image): Add 'else' clause.
2022-07-01services: root-file-system: Cleanly unmount upon shutdown.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/56209>. Reported by angry rectangle <angryrectangle@cock.li>. * gnu/packages/admin.scm (shepherd-0.9)[modules, snippet]: New fields. * gnu/services/base.scm (%root-file-system-shepherd-service): In 'stop' method, remove 'call-with-blocked-asyncs'. When 'mount' throws to 'system-error, call (@ (fibers) sleep) and try again. * gnu/tests/base.scm (run-root-unmount-test): New procedure. (%test-root-unmount): New variable.
2022-07-01file-systems: Add 'cleanly-unmounted-ext2?'.Ludovic Courtès
* gnu/build/file-systems.scm (ext2-superblock-cleanly-unmounted?) (cleanly-unmounted-ext2?): New procedures.
2022-07-01gnu: texlive-fmtcount: Add proper 'license' value.Ludovic Courtès
This is a followup to df5e07c16d2d4e72423f0e8c6b5b53c7020bc77a. * gnu/packages/tex.scm (texlive-fmtcount)[license]: New field.
2022-07-01services: nginx: Add support for extra content in upstream blocks.Christopher Baines
I'm looking at this as I'd like to use the keepalive functionality. * gnu/services/web.scm (nginx-upstream-configuration-extra-content): New procedure. (emit-nginx-upstream-config): Include the extra-content if applicable. * doc/guix.texi (NGINX): Document this.
2022-07-01gnu: grip: Update to 4.6.1.Luis Henrique Gomes Higino
* gnu/packages/python-web.scm (grip): Update to 4.6.1. (arguments): Use a gexp. Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-07-01services: guix: Support guix-build-coordinator parallel hooks.Christopher Baines
* gnu/services/guix.scm (guix-build-coordinator-configuration-parallel-hooks): New procedure. (make-guix-build-coordinator-start-script): Accept and use #:parallel-hooks. (guix-build-coordinator-shepherd-services): Pass parallel-hooks to make-guix-build-coordinator-start-script. * doc/guix.texi (Guix Build Coordinator): Document this new field.
2022-07-01gnu: guix-build-coordinator: Update to 0-55.23504e0.Christopher Baines
* gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-55.23504e0.
2022-07-01gnu: Add r-sungeo.Wiktor Żelazny
* gnu/packages/cran.scm (r-sungeo): New variable.
2022-07-01gnu: Add r-measurements.Wiktor Żelazny
* gnu/packages/cran.scm (r-measurements): New variable.
2022-07-01gnu: Add r-cartogram.Wiktor Żelazny
* gnu/packages/cran.scm (r-cartogram): New variable.
2022-07-01gnu: Add r-automap.Wiktor Żelazny
* gnu/packages/cran.scm (r-automap): New variable.
2022-07-01gnu: Add r-gstat.Wiktor Żelazny
* gnu/packages/cran.scm (r-gstat): New variable.
2022-07-01gnu: Add r-spacetime.Wiktor Żelazny
* gnu/packages/cran.scm (r-spacetime): New variable.
2022-07-01gnu: Add r-antiprofiles.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-antiprofiles): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add r-annmap.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-annmap): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add r-anf.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-anf): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add r-anaquin.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-anaquin): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-06-30gnu: opensbi: Update to 1.1.Vagrant Cascadian
* gnu/packages/firmware.scm (make-opensbi-package): Update to 1.1.
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