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* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.14.0.
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* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.6.1.
[propagated-inputs]: Add r-mass and r-scales.
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* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.72.0.
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* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.18.0.
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* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.48.1.
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* gnu/packages/bioinformatics.scm (r-affy): Update to 1.58.0.
[inputs]: Add zlib.
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* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.50.0.
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* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.14.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
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* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.12.0.
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* gnu/packages/bioinformatics.scm (r-sva): Update to 3.28.0.
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* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.0.
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* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.12.0.
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* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.30.0.
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* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.4.0.
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* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.24.0.
[arguments]: Remove.
[propagated-inputs]: Remove r-zlibbioc; add r-rhdf5lib.
[inputs]: Remove perl.
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* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.8.0.
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* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.6.1.
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* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.12.0.
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* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.12.1.
[native-inputs]: Remove autoconf.
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* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.26.0.
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* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.24.0.
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* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.46.0.
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* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.12.0.
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* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.12.0.
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* gnu/packages/bioinformatics.scm (r-impute): Update to 1.54.0.
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* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.48.0.
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* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.32.0.
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* gnu/packages/bioinformatics.scm (r-graph): Update to 1.58.0.
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.32.0.
[propagated-inputs]: Remove r-rmysql.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.40.2.
[native-inputs]: Add pkg-config.
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* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.16.0.
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* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.10.1.
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* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.0.
[propagated-inputs]: Add r-biocparallel.
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* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.32.0.
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* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.48.0.
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* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.14.1.
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* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.36.1.
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* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.42.1.
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* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.40.0.
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* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.32.3.
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* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.20.0.
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* gnu/packages/bioinformatics.scm (r-limma): Update to 3.36.1.
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* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.26.0.
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* gnu/packages/bioinformatics.scm (r-edger): Update to 3.22.2.
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* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.16.0.
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* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.14.10.
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* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.18.2.
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* gnu/packages/bioinformatics.scm (r-dnacopy): Update to 1.54.0.
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* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.16.0.
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* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.8.2.
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